prot_P-lacustris_contig981.16133.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig981.16133.1
Unique Nameprot_P-lacustris_contig981.16133.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length278
Homology
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: D8LHH2_ECTSI (CPLD51 protein required for cyt b6 assembly n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH2_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.090e-82
Identity = 151/204 (74.02%), Postives = 162/204 (79.41%), Query Frame = 0
Query:    1 MTRRARSTLIMALTTAVGLATSSQGFRTATVAGTSGFIANTGGSFFSINRGRSVCSRRARAAYQTTQRDWHPTVQTTGLLLSMVIAPSEVADVAITAHDAVSVALPTFLLSGEMAAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 204
            MTRR   + ++AL+T V LA S QGF   T  GT  F+A +G  FFS+N GR V SRRARAAYQ   R W  T    G  LSMV+AP EV D A+ AH AVS ALP+FLLS E  AEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESV+QTAAKIIAYFQANNYKIKEAGETITFEG
Sbjct:    1 MTRRTTRSALLALST-VSLAASGQGFFAGTT-GTPAFVATSGSRFFSVNGGRPVSSRRARAAYQ---RHWPSTA---GSPLSMVVAPHEVVDAAVAAHHAVS-ALPSFLLSDEAVAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVKQTAAKIIAYFQANNYKIKEAGETITFEG 195          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A835YMB8_9STRA (CPLD51 protein required for cyt b6 assembly n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.320e-27
Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 0
Query:  121 SVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEGPSRRARA 211
            SV YSK SYY TLGLY+LSFPGLWSV+KRA KTKYK+  Y + GPA+    A+ V+Q AA+++AYFQANNYKI  AGE I FEG  + +R+
Sbjct:   86 SVSYSKSSYYATLGLYLLSFPGLWSVIKRAAKTKYKERVYTVAGPAAAV-AAKPVKQVAAEVVAYFQANNYKIVSAGEEIVFEGAVQASRS 175          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7S1VVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVB4_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.010e-22
Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 0
Query:   66 TQRDWHPTVQTTGLLLSMVIAPSEVADVAITAHDAVSVALPTFLLSGEMAAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 204
            T++D H  +++   LLS+++ P+ V        +A S    T        A A+G +GYSK SYYT LGLY +SFPGLWS +KR+T  K K  TY  PG  + E   + ++Q A +I+AY +ANNY +  AGETITF G
Sbjct:   22 TKKDRHHNIKSPTPLLSLMMDPNSVLS------EASSWLADT--------APASGEIGYSKISYYTILGLYAMSFPGLWSQIKRSTTAKVKRKTYISPGENAPE--GKDLRQQAGEIMAYMKANNYDVVNAGETITFRG 144          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A8J5XW98_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XW98_DIALT)

HSP 1 Score: 102 bits (254), Expect = 3.390e-22
Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = 0
Query:   94 AITAHDAVSVALPTFLLS--GEMAAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 204
            A+  H A   A PT LL   G   AE       S  SYY TLGL+VL+FPG++S V RATK K K  TYELPGPA   +GA++++Q A +++ +FQANNYKIK AG+TI FEG
Sbjct:   41 ALARHAAGRRAAPTALLPLPGMSLAEVDSQ---SANSYYATLGLFVLTFPGIFSQVTRATKAKVKRKTYELPGPAV--EGAKAIKQVAGEVVGHFQANNYKIKTAGDTIIFEG 148          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7R9ZEM2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZEM2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 9.250e-22
Identity = 46/81 (56.79%), Postives = 63/81 (77.78%), Query Frame = 0
Query:  124 YSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 204
            YSK+S+YTTLG+YV+SFPGLWS +KR+TK K K  TY   G     +G + ++Q A +I+AY +ANNY+++EAGETITF+G
Sbjct:   26 YSKWSFYTTLGVYVMSFPGLWSQIKRSTKAKVKRKTYVSDG--ENAEGGKDMRQQAGEIMAYMKANNYEVEEAGETITFKG 104          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7S0L649_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L649_9EUKA)

HSP 1 Score: 101 bits (251), Expect = 1.130e-21
Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:  105 LPTFLLSGEMAAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 204
            LP  L +  + A A    G+S+ S+YTTL LYVL+FPG++S+VKR+ K+K    TY LPGPA+ +      ++ A  I+A+FQANNYKIK+A +TI FEG
Sbjct:   64 LPALLAAAPLPALADEGAGFSQASFYTTLALYVLAFPGVYSLVKRSVKSKVVRKTYALPGPAADD--GRPTRELAGDIVAFFQANNYKIKDAADTIVFEG 161          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: R1DVU1_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DVU1_EMIHU)

HSP 1 Score: 100 bits (250), Expect = 1.330e-21
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 0
Query:  115 AAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 204
            AA A+G  G+S  SYYTTL LYVL+FPG++S+VKR+TK+K    TYE+ GPA+       V++ A  I+A+FQANNYK+K+ G+ I FEG
Sbjct:   65 AAAASGEAGFSSASYYTTLTLYVLAFPGVYSLVKRSTKSKVVRKTYEVAGPAAP--AGRPVRELAGDILAFFQANNYKVKDRGDVIVFEG 152          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7S4HKN9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HKN9_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 4.700e-21
Identity = 49/82 (59.76%), Postives = 60/82 (73.17%), Query Frame = 0
Query:  123 GYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 204
            GYS  S+Y TL LYVLSFPGL+S+V R+ K+K    TYE+ GPAST  G   V++TA  I+AYFQANNYKI +A + I FEG
Sbjct:   22 GYSSVSFYFTLVLYVLSFPGLYSLVTRSVKSKVVRKTYEVAGPAST--GGRPVRETAGDIVAYFQANNYKIADASDVIVFEG 101          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A6U0P5Y2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0P5Y2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 7.500e-21
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 0
Query:  110 LSGEMAAEAAGSVG----YSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETITFEG 204
            L  E+ +EAA +V     YSK SYYTTLGLY LSFPG+WS +KR+T  K K  T+   G A+ EKG + ++Q A +I+AY +ANNY++ EAGETITF G
Sbjct:   41 LISEVGSEAAAAVTEPATYSKASYYTTLGLYALSFPGIWSQIKRSTSAKVKRKTFISDGEAA-EKGKD-LRQQAGEIMAYMKANNYEVVEAGETITFRG 137          
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Match: A0A7R9XVV1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XVV1_9VIRI)

HSP 1 Score: 97.8 bits (242), Expect = 9.480e-21
Identity = 50/97 (51.55%), Postives = 65/97 (67.01%), Query Frame = 0
Query:  115 AAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTE-KGAESVQQTAAKIIAYFQANNYKIKEAGETITFEGPSRRAR 210
            AA AA   GY+K SYYTTLGLY+ S PGL+S+VKR+TK K    TY +PGPA TE +G + +   A ++  +F  NNY I +AGE +TF G   R+R
Sbjct:   34 AAAAADEPGYAKSSYYTTLGLYLFSLPGLYSLVKRSTKAKVVQKTYAVPGPAVTEAEGGKPLDALAREVSTFFIRNNYNITDAGEIVTFTGNIERSR 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig981.16133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHH2_ECTSI1.090e-8274.02CPLD51 protein required for cyt b6 assembly n=2 Ta... [more]
A0A835YMB8_9STRA1.320e-2762.64CPLD51 protein required for cyt b6 assembly n=1 Ta... [more]
A0A7S1VVB4_9STRA3.010e-2243.17Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A8J5XW98_DIALT3.390e-2253.10Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7R9ZEM2_9STRA9.250e-2256.79Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0L649_9EUKA1.130e-2150.00Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
R1DVU1_EMIHU1.330e-2154.44Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S4HKN9_9EUKA4.700e-2159.76Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A6U0P5Y2_9STRA7.500e-2154.55Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9XVV1_9VIRI9.480e-2151.55Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021919Cofactor assembly of complex C subunit B, CCB1PFAMPF12046CCB1coord: 128..207
e-value: 1.1E-17
score: 63.8
IPR021919Cofactor assembly of complex C subunit B, CCB1PANTHERPTHR35302FAMILY NOT NAMEDcoord: 104..209
NoneNo IPR availablePANTHERPTHR35302:SF1PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, CHLOROPLASTICcoord: 104..209
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig981contigP-lacustris_contig981:40313..44022 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig981.16133.1mRNA_P-lacustris_contig981.16133.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig981 38858..44203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig981.16133.1 ID=prot_P-lacustris_contig981.16133.1|Name=mRNA_P-lacustris_contig981.16133.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=278bp
MTRRARSTLIMALTTAVGLATSSQGFRTATVAGTSGFIANTGGSFFSINR
GRSVCSRRARAAYQTTQRDWHPTVQTTGLLLSMVIAPSEVADVAITAHDA
VSVALPTFLLSGEMAAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRA
TKTKYKDATYELPGPASTEKGAESVQQTAAKIIAYFQANNYKIKEAGETI
TFEGPSRRARARRSSWCSARPCRSRRWRSCCRSSSLPSATTGSCSLSCLP
TLACTTGKTALGTIRRRCGWRHRTTRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021919CCB1