prot_P-lacustris_contig981.16132.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig981.16132.1
Unique Nameprot_P-lacustris_contig981.16132.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length346
Homology
BLAST of mRNA_P-lacustris_contig981.16132.1 vs. uniprot
Match: A0A6H5KN83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN83_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 3.920e-139
Identity = 236/352 (67.05%), Postives = 261/352 (74.15%), Query Frame = 0
Query:    1 MSAVDYSKWDKMANEMSDSDDDHGNNPEVTTFDEPQSVTFGGTPAS--AEVWTDTSD-TGHHP--TPSSPHVEAPIDGFAGAAAEAGGTASAASPRPKIHEPVSNEQLAENGAAVHRDDNDGRQVLHYVWRQAREEVAVVVPVPSGTRAADVEVSLTAKPETVTEGVADLLRVSVKASSGV-GIASGAAGDDVAAPGVGAGMLHVLEGELAFQVKLGEEGEGEVDWELKDYPGTVVTRDCP-VDGEDAGGTPAAATAAAAGSGEGFIARRSGSNGDRRGVEVVLRKHCPVSNAAVWWKSLLKGGPEIDVSAIKGRATNEHQSVWEEALGMFKEKVASRKSQEKISVDMGGGD 345
            MS VDYSKWDKMA+EMSDSDDD+GNNPEVTTFD+PQSVTFGGT AS  AE W   SD +G HP  TPSS  V AP DG  GA A A   A+  +P P++   +S+E+L ENGAAV  D N GRQ L YVWRQ R EV VVVPVP+GTRA DVEVSL AKPET+ EGVADL+RV+VKA+ G  G AS   G    APG G  ++ VLEGELAFQ KLG E EGEV+WELKDYPGT V RD P   G+  G  P  A AA      G     S SNGDRRGVE+VL+KHCPV NAAVWWKSLLKGGPEIDV+AIKGRATN HQSVWEEALGMFKE+VA+RK Q KISVDM  GD
Sbjct:    1 MSGVDYSKWDKMASEMSDSDDDNGNNPEVTTFDQPQSVTFGGTSASQAAEGWDGASDDSGAHPDTTPSSSGVAAPADGSTGAVAAA---ATGTTPTPQVKPLISDERLTENGAAVRGDANAGRQALQYVWRQTRAEVVVVVPVPAGTRAGDVEVSLRAKPETIAEGVADLIRVAVKATRGRDGAASRELGTAATAPGGGTKLVPVLEGELAFQAKLGAEDEGEVEWELKDYPGTAVARDDPDSSGDPVGSAPPPAPAA------GAREASSSSNGDRRGVEIVLKKHCPVPNAAVWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKEQVAARKGQPKISVDMEEGD 343          
BLAST of mRNA_P-lacustris_contig981.16132.1 vs. uniprot
Match: A0A836CJH1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH1_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 9.360e-11
Identity = 74/223 (33.18%), Postives = 96/223 (43.05%), Query Frame = 0
Query:    4 VDYSKWDKMANEMSDSDDDHGNN-PEVTTFDEPQSVTFGGTPASAEVWTDTSDTGHHPTPSSPHVEAPIDGFAGAAAEAGGTASAASPRPKIHE-PVSNEQLAENGAAVHRDDNDGRQVLHYVWRQAREEVAVVVPVPSGTRAADVEVSLTAKPETVTEGVADLLRVSVKASSGVGIASGAAGDDVAAPGVGAGMLHVLEGELAFQVKLGEEGEGEVDWELKD 224
            VDYSKWDKMA +MSDS+D+ G + P VT FD P SVT+GG            D                       + AG   +  S R  + + P     L  NGAAV  D         Y W Q+R +VA+ V  P GTRA++VEV +T+     T      L   +K S     A GA                +LEG+L + V L  +    VDW L+D
Sbjct:    2 VDYSKWDKMAADMSDSEDEEGGSKPVVTAFDNPTSVTWGG-----------GDAPEEERLXXXXXXXXXXXXXXXXSSAGTPGADDSKRAALTDKPARLLTLTRNGAAVQDDCG----AYTYFWSQSRGDVAITVVAPPGTRASEVEVKVTSDASAPTLAAQAPLGHHLKVS-----AKGAI---------------LLEGDLTYPVALDPDDPESVDWVLQD 189          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig981.16132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN83_9PHAE3.920e-13967.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJH1_9STRA9.360e-1133.18CS domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 79..154
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 115..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig981contigP-lacustris_contig981:36588..37625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig981.16132.1mRNA_P-lacustris_contig981.16132.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig981 36568..38758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig981.16132.1 ID=prot_P-lacustris_contig981.16132.1|Name=mRNA_P-lacustris_contig981.16132.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=346bp
MSAVDYSKWDKMANEMSDSDDDHGNNPEVTTFDEPQSVTFGGTPASAEVW
TDTSDTGHHPTPSSPHVEAPIDGFAGAAAEAGGTASAASPRPKIHEPVSN
EQLAENGAAVHRDDNDGRQVLHYVWRQAREEVAVVVPVPSGTRAADVEVS
LTAKPETVTEGVADLLRVSVKASSGVGIASGAAGDDVAAPGVGAGMLHVL
EGELAFQVKLGEEGEGEVDWELKDYPGTVVTRDCPVDGEDAGGTPAAATA
AAAGSGEGFIARRSGSNGDRRGVEVVLRKHCPVSNAAVWWKSLLKGGPEI
DVSAIKGRATNEHQSVWEEALGMFKEKVASRKSQEKISVDMGGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037898NudC_fam
IPR008978HSP20-like_chaperone