prot_P-lacustris_contig98.16107.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig98.16107.1
Unique Nameprot_P-lacustris_contig98.16107.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length272
Homology
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Match: A0A6H5K0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D3_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.360e-51
Identity = 222/267 (83.15%), Postives = 229/267 (85.77%), Query Frame = 0
Query:    1 MGDRELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGLADVDVPANATSRAFAAELMARVGAPGGXXXXXXXXXXXXXXX--PTNAELLRQSQNYALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVIRARRDRPAAETELTEEERVELERERDRNERDALVERMLDKDKSKTKQMELGGLTPAQISELATRGKVTTESGSQR 265
            MGDREL QWVSDKLHDVVGFSE  T QFVVALARRASKSG GAAALLAGL+D+DVPANATSRAFAAELMARVGA GGXXXXXXXXXXXXXXX  PTNAELL+QSQ+YAL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TVIR RR RP                     ERDALVERM++KDKSKTKQMELGGLTPAQISELATRGKVT+ESG QR
Sbjct:   71 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGGXXXXXXXXXXXXXXXXXPTNAELLKQSQSYALLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TVIRPRRARPEXXXXXXXXXXXXXXXXXXXXERDALVERMMEKDKSKTKQMELGGLTPAQISELATRGKVTSESGEQR 333          
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Match: D8LHZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ7_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.980e-39
Identity = 213/265 (80.38%), Postives = 217/265 (81.89%), Query Frame = 0
Query:    1 MGDRELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGLADVDVPANATSRAFAAELMARVGAPGGXXXXXXXXXXXXXXXPTNAELLRQSQNYALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVIRARRDRPAAETELTEEERVELERERDRNERDALVERMLDKDKSKTKQMELGGLTPAQISELATRGKVTTESGSQR 265
            MGDREL QWVSDKLHDVVGFSE  T QFV+ALARRASKSG GAAALLAGL+D+DVPANATSRAFAAELM RVGA G  XXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVIRARR RP                     ERDALVERMLDKDKSKTKQMELGGLTPAQISELATRGKVT+ESG QR
Sbjct:    1 MGDRELLQWVSDKLHDVVGFSESSTAQFVLALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMTRVGASG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTVIRARRARPEXXXXXXXXXXXXXXXXXXXXERDALVERMLDKDKSKTKQMELGGLTPAQISELATRGKVTSESGEQR 263          
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Match: A0A835YTF2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF2_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.990e-22
Identity = 137/262 (52.29%), Postives = 163/262 (62.21%), Query Frame = 0
Query:    1 MGDRELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGLADVDVPANATSRAFAAELMARVGAPGGXXXXXXXXXXXXXXXPTNAELLRQSQNYALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVIRARRDRPAAETELTEEERVELERERDRNERDALVERMLDKDKSKTKQMELGGLTPAQISELATRGKVTTESG 262
            M DRE+ +WVSDKLHD++G+S+  T QF+ ALA+RA+ +     AL+  LAD DVP N ++R+FA EL+ +VG                   PT AELL  S++Y L    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                R + A   E TEE+  E +R  D  ERDALVERM+++DKSKTK  ELGGLTPAQ+ ELATRG +    G
Sbjct:    1 MSDREVNRWVSDKLHDILGYSDNTTAQFITALAKRATSAD----ALVEQLADNDVPVNDSTRSFARELLMKVGG-----AAARPAQPAAPRGPTQAELLAASKSYGLLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------RPKRAKAVEETEEDAAERQRRADLEERDALVERMMERDKSKTKSAELGGLTPAQVQELATRGVLRGAGG 221          
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Match: A0A7S0I880_MICPS (RNA helicase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I880_MICPS)

HSP 1 Score: 65.5 bits (158), Expect = 2.500e-8
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    1 MGDRELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGLADVDVPANATSRAFAAELMARVGAPGG 77
            M +R L+ WVSDKLHD++GF+E     +V+AL ++AS +G+    L + LA   +P + T+R+FAAELM+RV   GG
Sbjct:    1 MDERALKSWVSDKLHDILGFAEGALASYVIALGKKASDAGS----LASQLASQGLPDDGTTRSFAAELMSRVPRAGG 73          
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Match: A0A7S1DHS5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DHS5_HEMAN)

HSP 1 Score: 62.4 bits (150), Expect = 5.490e-8
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    1 MGDRELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGLADVDVPANATSRAFAAELMARVGA 74
            MGD  L++WVSD+LH +VG+SE+  V +V+AL  RA       A++LA L + D+P N TSR FA  LM R GA
Sbjct:   24 MGD--LEKWVSDQLHGLVGYSEKVVVDYVIALGTRAKDE----ASILAALRENDIPINDTSRKFAVNLMKRSGA 91          
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Match: A0A2V0NYA0_9CHLO (RNA helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NYA0_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 4.770e-7
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    3 DRELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGLADVDVPANATSRAFAAELMARV 72
            DREL+ WVSD+LHDV GFS+R T  F++A AR+A     G AAL   L+   +P      AFAAEL++R+
Sbjct:    4 DRELRAWVSDRLHDVAGFSDRTTADFILATARKAKA---GPAALARALSAAGLPDTPPVAAFAAELLSRL 70          
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Match: A0A0D2KYR4_9CHLO (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KYR4_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 2.130e-5
Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    3 DRELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGLADVDVPANATSRAFAAELMARV 72
            DREL+ WVSD+LH++VGFS+R T  F++A A++   S   A AL   L+   +P NA   AF  EL++R+
Sbjct:    4 DRELRSWVSDRLHELVGFSDRTTADFILAQAKKVKGS---APALGRHLSAAGLPDNAAVAAFCGELLSRL 70          
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Match: L1IN45_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1IN45_GUITC)

HSP 1 Score: 55.5 bits (132), Expect = 4.730e-5
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    5 ELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGLADVDVPANATSRAFAAELMARV 72
            +L++WV D+LH ++G SE + V +V+ALA+++       AAL+A L D DVP N  SR FA +LM  V
Sbjct:    3 DLKKWVGDQLHGLIGMSESNLVDYVIALAKKSRDE----AALMAALRDNDVPINDESRRFALQLMKSV 66          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig98.16107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5K0D3_9PHAE2.360e-5183.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHZ7_ECTSI1.980e-3980.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTF2_9STRA4.990e-2252.29P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S0I880_MICPS2.500e-846.75RNA helicase n=1 Tax=Micromonas pusilla TaxID=3883... [more]
A0A7S1DHS5_HEMAN5.490e-850.00Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A2V0NYA0_9CHLO4.770e-750.00RNA helicase n=1 Tax=Raphidocelis subcapitata TaxI... [more]
A0A0D2KYR4_9CHLO2.130e-545.71Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
L1IN45_GUITC4.730e-545.59Uncharacterized protein n=2 Tax=Geminigeraceae Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..226
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 5..114
NoneNo IPR availablePANTHERPTHR18934:SF214coord: 5..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig98contigP-lacustris_contig98:56169..60206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig98.16107.1mRNA_P-lacustris_contig98.16107.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig98 35300..61191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig98.16107.1 ID=prot_P-lacustris_contig98.16107.1|Name=mRNA_P-lacustris_contig98.16107.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=272bp
MGDRELQQWVSDKLHDVVGFSERDTVQFVVALARRASKSGNGAAALLAGL
ADVDVPANATSRAFAAELMARVGAPGGGGRGAQRQQRQEQRQPTNAELLR
QSQNYALLSSDEEEGGGGGYSSLKEKEARRAEKRALRKSGKREKKAAAAA
AAETSGIGRDDGSGSGNKGGGRRRRRGGDDGESSEDDTVIRARRDRPAAE
TELTEEERVELERERDRNERDALVERMLDKDKSKTKQMELGGLTPAQISE
LATRGKVTTESGSQRSSPRRS*
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