prot_P-lacustris_contig979.16104.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig979.16104.1
Unique Nameprot_P-lacustris_contig979.16104.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length717
Homology
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BLAST of mRNA_P-lacustris_contig979.16104.1 vs. uniprot
Match: D7G0P3_ECTSI (Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0P3_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 2.320e-107
Identity = 289/683 (42.31%), Postives = 347/683 (50.81%), Query Frame = 0 
Query:   70 TVQMMHSQIELLRQTILNLRKTGAQEMGDLRRQIGALEKLDPISAKALFDDIDSTSDAGDQPPAGVTPSQIKRLELLEDAIWGRSAVAGQASHLNIETSAEAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGHPDDGXXXXXXXEDVGDGEGAAARTEPKMRTWARKMMMFGGMAADVGVLQRQIDTFGEREENIETRVAALERQLAADAEAASSDAAEQRLKLLWRLMRQTTILRDKLVADGIAACAEGERGVNGVLIQEEALWAAPQETAXXXXXXXXXXXXXXXXXXXXXXXLILAARARLAWLENHAEETPSLG-TSLAGAVDSSEMVETQGSNQPIARES-DVDGGEAVES-TQANGDIGDVRQR-AKGDLPALAWKAPGEDEGASGAGWAVNLRNISAGG----GTTDVEVDRLWCRMDEIEGRIYRICADRERQRSQAGGP----KLAEVTGADLRHLQESMEQSSLALGLKLQDGLGSLSRRIELLEDNVQMVKARALSSSAPHAIAPPD-------------------------DSRIEQILTKVLGNEIPMVRRGIEGLTERVTSLEEAMAGAKEAGPPGLSAEEAAAXXXXXXXQ-ANEETQARMVAEMSALEERVDRRVREEARRTREDREAAEARGAMRRVSAVVSAYTADLATRLEGLRSEHEQQG 714
            TVQ+MHSQI LLRQT+L+LR+T AQE+GDLRRQI ALE   P +AKA FDDIDS   A +Q P G                                                                                                              GM          + T GERE+ IE+RVAALER+L ADAE A + AAE++ +LL RLMRQT +LR+ ++A+G+AA  EG         QEE  WA  +E                         LIL ARARLAWLE+ AE TPS G  + +G   S +  ET+ ++QP   ++ D+D     E  T A+G   DV QR A G LPA AW APG DEG                     G  D EV RLW  MDEIE RIYR C+DR R  S+  G     K  EVTGADL++LQ+S+E SSLA+G KL++GL +L  R+ LLE NV+ VKARALS SA  A++                            DSRIE+IL  VLG+EIP +RR + G+TERV  LE  +A    AG  GLS EEAAA       + ANEETQAR+ AEMSALEERVDRR REEAR        AEARGAMRRVSA VSAYTADLATRL+GL+SEHE+QG
Sbjct:   10 TVQVMHSQIALLRQTVLDLRETKAQEIGDLRRQIDALETSGPGNAKARFDDIDSRLRAVEQQPGG-------------------------------------------------------------------------------------------------------------SGM----------VGTIGEREDRIESRVAALERKLLADAEGAKAAAAERKRRLLDRLMRQTIVLRNTIIAEGMAAGTEGRSEGESEAAQEEDCWAGVREDMVRGGRGSGGVGQAADEEE-----LILTARARLAWLESCAENTPSSGGIAGSGPAGSGDDAETERNDQPATSDNGDIDLVVPEEGGTPASGMSDDVGQRRAAGALPAEAWTAPG-DEGXXXXXXXXXXXXXXXXXXXXXGDADGEVARLWRWMDEIESRIYRRCSDRGRLPSRGAGDVVTSKAGEVTGADLQNLQDSVELSSLAMGNKLEEGLATLDERMNLLEGNVRSVKARALSRSALDAVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXDSRIEEILAGVLGDEIPTLRRDLGGVTERVAHLEATVA-EDGAGGAGLSVEEAAAAAADAASRLANEETQARLAAEMSALEERVDRRAREEARXXXXXXXXAEARGAMRRVSATVSAYTADLATRLDGLKSEHEEQG 566
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig979.16104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0P3_ECTSI2.320e-10742.31Imm downregulated 18 n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 662..682
NoneNo IPR availableCOILSCoilCoilcoord: 601..621
NoneNo IPR availableCOILSCoilCoilcoord: 257..277
NoneNo IPR availableCOILSCoilCoilcoord: 544..564

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig979contigP-lacustris_contig979:59600..67242 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig979.16104.1mRNA_P-lacustris_contig979.16104.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig979 53397..67348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig979.16104.1 ID=prot_P-lacustris_contig979.16104.1|Name=mRNA_P-lacustris_contig979.16104.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=717bp
MTSGEADRESGALDVQQQADEEASSARDGEPVHDDITLSSKLEEAWPRME
MDGERALVVCTIDIQLLAGTVQMMHSQIELLRQTILNLRKTGAQEMGDLR
RQIGALEKLDPISAKALFDDIDSTSDAGDQPPAGVTPSQIKRLELLEDAI
WGRSAVAGQASHLNIETSAEAAAAAAAAAATPAAATPAAALEDAKEEELH
ELVGHPDDGGGGEGGGEDVGDGEGAAARTEPKMRTWARKMMMFGGMAADV
GVLQRQIDTFGEREENIETRVAALERQLAADAEAASSDAAEQRLKLLWRL
MRQTTILRDKLVADGIAACAEGERGVNGVLIQEEALWAAPQETAGGGGRT
MGGGGIGGDEQAAEEEDLILAARARLAWLENHAEETPSLGTSLAGAVDSS
EMVETQGSNQPIARESDVDGGEAVESTQANGDIGDVRQRAKGDLPALAWK
APGEDEGASGAGWAVNLRNISAGGGTTDVEVDRLWCRMDEIEGRIYRICA
DRERQRSQAGGPKLAEVTGADLRHLQESMEQSSLALGLKLQDGLGSLSRR
IELLEDNVQMVKARALSSSAPHAIAPPDDSRIEQILTKVLGNEIPMVRRG
IEGLTERVTSLEEAMAGAKEAGPPGLSAEEAAAAAADAARQANEETQARM
VAEMSALEERVDRRVREEARRTREDREAAEARGAMRRVSAVVSAYTADLA
TRLEGLRSEHEQQGWW*
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