prot_P-lacustris_contig979.16103.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig979.16103.1
Unique Nameprot_P-lacustris_contig979.16103.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length469
Homology
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BLAST of mRNA_P-lacustris_contig979.16103.1 vs. uniprot
Match: A0A6H5JU08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU08_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 2.520e-107
Identity = 214/384 (55.73%), Postives = 246/384 (64.06%), Query Frame = 0 
Query:  103 GARRLQAPTSPTAAPVDIDRYLPECASIFVPTLAGDNMTGTYTFQGRYNDGRPVYTTDSGNHLFATTAAEAGVQSTSWFITQPEESSKFFLSLESDVFEPADLEGLQPWVRNNDPTCNACTTCSVCSAMIRVSCAALTADVSTPSPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASYGYSSTSAGTTTVNETSAVGDCVNLDIKNGADRSGTYAL-DMNG-GWIVLRNERSSYTAVGPNRTDVVFSIMMNVCSAGYGVVDAAWAEAVGDLPSTATVDAVFLKYAAENVGVDTVD-----------------CEVPVWL-VTDGAEDLETAGDFTFLSMSGSGDPSEATSWAKFTPATDTTRASLVENFWVDVGCADA 466
            G RRLQ  ++  A        LP CAS+FVPT AGD +TGTY FQG Y+D RPVY   +GN  FA    E GV +T W++TQ   +S FFLSLES VFEPADLE LQPWVRNNDPTC +C +       + +SC+ALTAD     PTA       XXXXXXXXX                 A+          TT+ +TSAVG C NL I NG DR+G Y+L D++G G +V RN R SY AVG NRTDVVFS MMNVC++GYGVVDA WA  VG LP T+TV+AVFL Y AENVGVDT D                 CEVPVWL V DGAE L+ AG+ TFLS+SG  DPSEATSWAKFTPAT TTR +L ENFW+DVGCA A
Sbjct:   79 GGRRLQQASTDGA-------LLPACASLFVPTGAGDELTGTYDFQGHYSDRRPVYAAANGNKFFAKD--EEGVPTT-WYVTQASPNSTFFLSLESAVFEPADLEDLQPWVRNNDPTCRSCIS------KLSMSCSALTADAI---PTAPETTTPAXXXXXXXXXAENENLTMSTAETVVPPATTPXXXXLPPDTTMADTSAVGGCANLKINNGEDRAGVYSLSDVDGEGGVVFRNGRPSYAAVGANRTDVVFSTMMNVCASGYGVVDADWANHVGYLPPTSTVNAVFLMYVAENVGVDTADDAAAAIATAAASSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDVGCAAA 443
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BLAST of mRNA_P-lacustris_contig979.16103.1 vs. uniprot
Match: D7G0N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N9_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 8.800e-101
Identity = 194/361 (53.74%), Postives = 225/361 (62.33%), Query Frame = 0 
Query:  124 LPECASIFVPTLAGDNMTGTYTFQGRYNDGRPVYTTDSGNHLFATTAAEAGVQSTSWFITQPEESSKFFLSLESDVFEPADLEG----LQPWVRNNDPTCNACTTCSVCSAMIRVSCAALTADVSTPSPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASYGYSSTSAGTTTVNETSAVGDCVNLDIKNGADRSGTYAL---DMNGGWIVLRNERSSYTAVGPNRTDVVFSIMMNVCSAGYGVVDAAWAEAVGDLPSTATVDAVFLKYAAENVGVDTVD----------CEVPVWL-VTDGAEDLETAGDFTFLSMSGSGDPSEATSWAKFTPATDTTRASLVENFWVDVGCADA 466
            LP C+S+FVPT AGD +TGTY FQG Y+D RPVY   +GN  FA    E GV +T W+ITQ   +SKFFLSLES VFEPADL+     LQPWVRNNDPTC +C +       + +SC+A TADV   +P           X                        +     T    TT+ +TSAVG C NL I NG DR+G Y+L   D  GG +V RN R SY AVG +RTDVVFS  MNVC++GYGVVDA WA  V  LP T+TV+ VFL Y AENVGVDT D          CEVPVWL V DGAE L+ AG+ TFLS+SG  DPSEATSWAKFTPAT TTR +L ENFW+D GCADA
Sbjct:   92 LPACSSLFVPTGAGDELTGTYDFQGHYSDRRPVYAAANGNKFFAKD--EEGVPTT-WYITQASPNSKFFLSLESAVFEPADLKDPEDMLQPWVRNNDPTCGSCIS------KLHMSCSAWTADVIAAAPVTTTPAPNDPVXSSPAENENSTMSTAETVVPPATTPAPTDLPTD---TTMVDTSAVGGCANLKINNGEDRAGVYSLSGVDGEGG-VVFRNGRPSYAAVGADRTDVVFSTTMNVCASGYGVVDADWAVGVEYLPPTSTVNTVFLMYVAENVGVDTADDAAASSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDFGCADA 439
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig979.16103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU08_9PHAE2.520e-10755.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0N9_ECTSI8.800e-10153.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..468
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.735

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig979contigP-lacustris_contig979:46177..47583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig979.16103.1mRNA_P-lacustris_contig979.16103.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig979 46177..47583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig979.16103.1 ID=prot_P-lacustris_contig979.16103.1|Name=mRNA_P-lacustris_contig979.16103.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=469bp
MHITAASFAAAVSVLLSLAARPCSGRTYVRGSVLTPETVVSNTRVSYGDS
EKIPRVSSSRDGQQAGKKESTGVRGAGSGSGQQHQVQQGRVGGRKKTSKK
LRGARRLQAPTSPTAAPVDIDRYLPECASIFVPTLAGDNMTGTYTFQGRY
NDGRPVYTTDSGNHLFATTAAEAGVQSTSWFITQPEESSKFFLSLESDVF
EPADLEGLQPWVRNNDPTCNACTTCSVCSAMIRVSCAALTADVSTPSPTA
APAAVAAGMGSGNSTSPSSSAHTSPTAAPTALPASYGYSSTSAGTTTVNE
TSAVGDCVNLDIKNGADRSGTYALDMNGGWIVLRNERSSYTAVGPNRTDV
VFSIMMNVCSAGYGVVDAAWAEAVGDLPSTATVDAVFLKYAAENVGVDTV
DCEVPVWLVTDGAEDLETAGDFTFLSMSGSGDPSEATSWAKFTPATDTTR
ASLVENFWVDVGCADAAA*
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