prot_P-lacustris_contig971.16040.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig971.16040.1
Unique Nameprot_P-lacustris_contig971.16040.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length185
Homology
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BLAST of mRNA_P-lacustris_contig971.16040.1 vs. uniprot
Match: D7FWZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ2_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.310e-35
Identity = 126/181 (69.61%), Postives = 130/181 (71.82%), Query Frame = 0 
Query:    1 MDGSRGATGAVDVGVSHLNMNINVIGGGHGLGSGLSGRDKSIGAGDSAASSSPPVATTAFRSSAAMAASSVNGGLPSGRSRSPGFDVDKPSASSXXXXXXXXXXXXXXXXXXXXXX-TG-APGAEGSRXXXXXXXXXXXXXXXXXXXXXXXXXXDNSNNMDHAFTGATLQRSTSAPPMSDH 179
            MDGSRGATGAVDVGVSHLNMNINVIGGGHGLGSGLS  DKS  AGDS  S               MA SS NGGLPSGRSRSPGFDVDKP+   XXXXXXXXXXXXXXXXX      TG APGA    XXXXXX           XXXXXXXXX +SNN+DHAF GA LQRSTSAPP+SDH
Sbjct:    1 MDGSRGATGAVDVGVSHLNMNINVIGGGHGLGSGLSAGDKSA-AGDSTVSXXXXXXXXXXXXXXXMATSSSNGGLPSGRSRSPGFDVDKPTTXXXXXXXXXXXXXXXXXXXAGATVVTGSAPGAX-XXXXXXXXWLGAGDGFAGSXXXXXXXXXSSSNNVDHAFAGAMLQRSTSAPPVSDH 179
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig971.16040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWZ2_ECTSI2.310e-3569.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig971contigP-lacustris_contig971:122..1460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig971.16040.1mRNA_P-lacustris_contig971.16040.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig971 122..1460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig971.16040.1 ID=prot_P-lacustris_contig971.16040.1|Name=mRNA_P-lacustris_contig971.16040.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=185bp
MDGSRGATGAVDVGVSHLNMNINVIGGGHGLGSGLSGRDKSIGAGDSAAS
SSPPVATTAFRSSAAMAASSVNGGLPSGRSRSPGFDVDKPSASSSASEAA
ASNAAAAFLAGATAVVTGAPGAEGSRGSGGGWLGGGGAEDDFSTTAAAAG
RRDNSNNMDHAFTGATLQRSTSAPPMSDHVSLCF*
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