prot_P-lacustris_contig97.16024.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig97.16024.1
Unique Nameprot_P-lacustris_contig97.16024.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length487
Homology
BLAST of mRNA_P-lacustris_contig97.16024.1 vs. uniprot
Match: D7FYY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY5_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 3.040e-59
Identity = 218/500 (43.60%), Postives = 247/500 (49.40%), Query Frame = 0
Query:   76 VLRGGDSSHGSGSGGE---EAALPQRLG-AVEPAAALLDGA-ALKASGGKEEAVVDEVSKPASAVVE-----ARQERKVDAKEKALREALLSADGPTKILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAEARAAESASPPAPASAAASAVKGKXXXXXTAGGVVASGEGVLVTSQRVEGEHI--------------------------------ESGSNTG-----------GGGGGVVDVDEPGDAGRSA-----IPVMEAGGQTLASTSAAA------DFNTAGSAAARTSDGT--VNEEQRTSGHADAVAPPVADDTGTGTFDMERVRCDQRFEQLVEIIECVATELSVSDISKVVWGLSILGHVPRNSLLESLATFLTDRLRQEIAT-----------------------------GAFASPAAVAGGTEESATTGGSSGGVREGAGMAGVKMASDAAEEGEQGSQLVRPVDGDKRGVAAGAEDGN 480
            VLRGG  S  +GSG E   +A+ PQ+   AVEPA++   G    K + G+         KPA+A         +QE K DAKEKALREALLSADGP+KILRE ERIPALRRLSDSALRVTSATPSDGRLAALALYRLGA ARAAESA     AS AASAV+G          V A GE   V   +  GE                                  ESG  +               GG    +E G AG  A     I V    G T     AA       D   AGS   R+S+G   V EE  T   A +V         T  FDME VR DQRFEQLVEIIECV+ +LSVSD SKVVWGLSILGHVPRNSLLESLATFLTDRLRQE AT                             GA      VAGG E+  ++                  +SD+ +EG  GS   +P +G   G  +G E GN
Sbjct:    6 VLRGGGGSDSNGSGSEMEEQASPPQKQDVAVEPASSSQPGGDPTKGAVGEGPETDGATVKPAAAXXXXXXXXVKQEPKGDAKEKALREALLSADGPSKILREAERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESAPSSGLASTAASAVEGS---------VAADGERSAVGPSKTGGEGXXXXXXXXXERPERXXXXXXXXXXXXERPAAATESGDQSSTTPTATLSAATARQGGEPFNNEQGQAGTGAATGTGIEVPGVKGDTPEEAGAAGESVKTKDPALAGSVP-RSSEGGGGVEEEVGTPAAAASVGSSPNKGATTAAFDMEEVRSDQRFEQLVEIIECVSKDLSVSDTSKVVWGLSILGHVPRNSLLESLATFLTDRLRQEAATAAXXXXXXXXXXXXXXXXXXXXXXXEGEGGANGQKVTVAGGAEDGISS----------------PSSSDSPQEGGLGSGSGKPAEGHDDGQLSGIEGGN 479          
BLAST of mRNA_P-lacustris_contig97.16024.1 vs. uniprot
Match: A0A6H5JR07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR07_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 3.230e-40
Identity = 158/389 (40.62%), Postives = 180/389 (46.27%), Query Frame = 0
Query:  163 KILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAEARAAESASPPAPASAAASAVKGKXXXXXTAGGVVASGEGVLVTSQRVEGEHIESGSNTGGGGGGVVDVDEPGDAGRS------------AIPVMEAGGQTLASTSAAADFNT--------------------AGSAAARTSD----GTVNEEQRTSGHADAVAPPVA-------DDTGTGTFDMERVRCDQRFEQLVEIIECVATELSVSDISKVVWGLSILGHVPRNSLLESLATFLTDRLRQEIAT-------------------------GAFASPAAVAGGTEESATTGGSSGGVREGAGMAGVKMASDAAEEGEQGSQLVRPVDGDKRGVAAGAEDGNAGG 483
            +ILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGA ARAAESA     AS AASAV+G          V A GE   V   +  G            GG   + ++P  A  S            +   +  GG    +    AD                       A   + +T D    G V      +G  +    P A         T T  FDME VR DQRFEQLVEIIECVA +LSV      VWGLSILGHVPRNSLLESLATFLTDRLRQE                            GA    AAV G TE+  ++                    D+ +EG  GS   +P +G  RG  +G E  NAGG
Sbjct:    9 RILREVERIPALRRLSDSALRVTSATPSDGRLAALALYRLGAAARAAESAPSSGLASTAASAVEGS---------VAADGERAAVGPSKAGGRGKRGAVERPESGG--AEAEKPAAATESRDQSSTAPTATLSAATVRQGGDPFNNEQGQADTGATTGTGIEVPGVMGDDPQEPGAAGESVKTKDAALAGGVPRSPEGAGGVEEFGAPAAAVGSSPHKGTTTAAFDMEEVRSDQRFEQLVEIIECVAKDLSV------VWGLSILGHVPRNSLLESLATFLTDRLRQEAXXXXXXXXXXXXXXXXXXXXXXXXDEHGADGGKAAVGGSTEDGISS----------------PSTGDSLQEGGLGSGSGKPAEGLNRGQLSGIEGDNAGG 364          
BLAST of mRNA_P-lacustris_contig97.16024.1 vs. uniprot
Match: A0A6H5JLF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLF3_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.130e-6
Identity = 52/112 (46.43%), Postives = 66/112 (58.93%), Query Frame = 0
Query:   61 DLISLSSPRRATLLSVLRGGDSSHGSGSGGEE---AALPQRLG-AVEPAAALLDG-----AALKASGGKEEAVVDEVSKPASAVVEARQERKVDAKEKALREALLSADGPTK 163
            D ++LSS RR     VLRGG  S+  GSG E+   A+ PQ+   AVEPA+A   G      A+      + A V+  +  A+A V  +QE K DAKE+ALREALLSADGP K
Sbjct:   12 DTVALSSSRRMAFSRVLRGGGGSNSDGSGREKEEKASPPQKQDVAVEPASASQPGRDPAKGAVGEGPETDSATVEPAAAAAAAAV--KQEPKGDAKEQALREALLSADGPAK 121          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig97.16024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYY5_ECTSI3.040e-5943.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR07_9PHAE3.230e-4040.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLF3_9PHAE1.130e-646.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..486
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.804

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig97contigP-lacustris_contig97:144502..146944 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig97.16024.1mRNA_P-lacustris_contig97.16024.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig97 136013..147014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig97.16024.1 ID=prot_P-lacustris_contig97.16024.1|Name=mRNA_P-lacustris_contig97.16024.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=487bp
MKRLVGITLLIVSLSRACSGASTTASNQRLRSRTSTRDCLYWTSSTTAAT
APRATPLAIADLISLSSPRRATLLSVLRGGDSSHGSGSGGEEAALPQRLG
AVEPAAALLDGAALKASGGKEEAVVDEVSKPASAVVEARQERKVDAKEKA
LREALLSADGPTKILREVERIPALRRLSDSALRVTSATPSDGRLAALALY
RLGAEARAAESASPPAPASAAASAVKGKPPSPATAGGVVASGEGVLVTSQ
RVEGEHIESGSNTGGGGGGVVDVDEPGDAGRSAIPVMEAGGQTLASTSAA
ADFNTAGSAAARTSDGTVNEEQRTSGHADAVAPPVADDTGTGTFDMERVR
CDQRFEQLVEIIECVATELSVSDISKVVWGLSILGHVPRNSLLESLATFL
TDRLRQEIATGAFASPAAVAGGTEESATTGGSSGGVREGAGMAGVKMASD
AAEEGEQGSQLVRPVDGDKRGVAAGAEDGNAGGRRG*
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