prot_P-lacustris_contig97.16021.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig97.16021.1
Unique Nameprot_P-lacustris_contig97.16021.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length183
Homology
BLAST of mRNA_P-lacustris_contig97.16021.1 vs. uniprot
Match: D7FYX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX7_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 4.660e-20
Identity = 84/189 (44.44%), Postives = 101/189 (53.44%), Query Frame = 0
Query:    1 MARFNHVLALACLLRQ---FEGNAPNLASSCSSSFGQPSPSTSCDRAAAAARSPRRFISSAGLVCPAASEASL---SSDSGGTCRPRDHWRRRQRHLHGQPEDPMRPCRRRPLPCSSTSLSAVREGSSSGSSSGVHSRPSPGVVDLGEGDEVVGGLAAAGRPAPGGGARKIKEGGNK--GKSVLGKAGT 181
            M R  H LAL C LRQ   F       + + SSSF QPS  T+C   AA+A SPRR + SA L CP   +A+    S++ G  CRP  H  RR R      E  +R   RRP   S TSLSAVREG+SS SS+     P+P   D  EG+EV  GL A+  P PGG      +GG +  GK VL KAG 
Sbjct:   17 MVRLAHALALTCFLRQCGAFHPVGAPPSPAVSSSFRQPSTLTTCCGRAASATSPRRLVPSASLACPTPPQAARLHSSNNPGDACRPEGHRNRRYRRRDDGTEWRLR---RRP---SLTSLSAVREGTSSSSSA-----PAPAGQDQLEGEEVGWGLPASREPEPGGSRETKNKGGGEEGGKPVLEKAGN 194          
BLAST of mRNA_P-lacustris_contig97.16021.1 vs. uniprot
Match: A0A6H5JGI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI5_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.080e-18
Identity = 87/189 (46.03%), Postives = 100/189 (52.91%), Query Frame = 0
Query:    1 MARFNHVLALACLLRQ---FEGNAPNLASSCSSSFGQPSPSTSCDRAAAAARSPRRFISSAGLVCPAASEASL---SSDSGGTCRPRDHWRRRQRHLHGQPEDPMRPCRRRPLPCSSTSLSAVREGSSSGSSSGVHSRPSPGVVDLGEGDEVVGGLAAAGRPAPGGGARKIKEGGNK--GKSVLGKAGT 181
            MARF H LALAC LRQ   F       + + SSSF QPS   +C    A+A SP RF+ S  L CP   +A+    S++ G  CRP  H  RRQR      E  +R   RRP    STSLSAVREG+SS  SSG    PS G   L EG+E   GL A+G   PGG       G  K  GKSVL KAG 
Sbjct:   17 MARFAHALALACFLRQCGAFNPVGAPPSPAFSSSFRQPSSLATCCGRVASATSPSRFVPSGSLACPTPPQAARLHSSNNPGDACRPEGHRNRRQRCQRDGTEWRLR---RRPW---STSLSAVREGTSS--SSGA---PSSGQDQL-EGEEAGWGLPASGESEPGGSRETKNRGRGKEGGKSVLEKAGN 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig97.16021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYX7_ECTSI4.660e-2044.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGI5_9PHAE1.080e-1846.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..182
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.483

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig97contigP-lacustris_contig97:100781..102228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig97.16021.1mRNA_P-lacustris_contig97.16021.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig97 100766..104003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig97.16021.1 ID=prot_P-lacustris_contig97.16021.1|Name=mRNA_P-lacustris_contig97.16021.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=183bp
MARFNHVLALACLLRQFEGNAPNLASSCSSSFGQPSPSTSCDRAAAAARS
PRRFISSAGLVCPAASEASLSSDSGGTCRPRDHWRRRQRHLHGQPEDPMR
PCRRRPLPCSSTSLSAVREGSSSGSSSGVHSRPSPGVVDLGEGDEVVGGL
AAAGRPAPGGGARKIKEGGNKGKSVLGKAGTH*
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