prot_P-lacustris_contig964.15983.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig964.15983.1
Unique Name	prot_P-lacustris_contig964.15983.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	287

Homology

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: D7FTU9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU9_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 7.130e-56
Identity = 126/220 (57.27%), Postives = 141/220 (64.09%), Query Frame = 0

Query:    1 MPGELTRAFLEKVVQGSGWSLAEVEGLSLE-EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENERLQQRXXXXXXKEILSPEQHKCRPGQHYQGR---------STLFAATPTTATVDNSSSMGEPDGLMKT 210
            M G+LTRAFLE+VV+GSGWSLAEVE LSLE EGI SL+ S  GLRRLVYLNLARN LSSLLG+EHL SL TLVLRENRV+SIDEV RL  L +LR+LD+RLNP+M   SR  G   G SG S    GRPRADV+ VLPQL  LDGRG+ E+ERL                 H+ R GQ YQ           S  F A P T+        GEP GL  T
Sbjct:    1 MSGDLTRAFLEEVVRGSGWSLAEVESLSLEGEGIRSLRGSLGGLRRLVYLNLARNNLSSLLGIEHLVSLGTLVLRENRVESIDEVGRLSCLGDLRDLDIRLNPVMATASRRHG--GGRSGGSGS--GRPRADVVAVLPQLVTLDGRGVREDERLP----------------HRPRRGQQYQXXXXXWQQQRGSARFPAWPATSARSPRPRTGEPKGLATT 200

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A6H5JQB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB1_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.080e-50
Identity = 109/157 (69.43%), Postives = 120/157 (76.43%), Query Frame = 0

Query:    1 MPGELTRAFLEKVVQGSGWSLAEVEGLSLE-EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENERLQQR 156
            MP +LTRAFLEKVV+GSGWSLAEVE LSLE EGI SL+ S  GLRRLVYLNLARN LSSLLG+EHL SL TLVLRENRV+SIDEV RL  L +LR LDLR NP+M   SR  G   G SG+     G PRADV+ VLPQL  LDGRG+ E+ERL  R
Sbjct:  159 MPSDLTRAFLEKVVRGSGWSLAEVESLSLEGEGIRSLRGSLGGLRRLVYLNLARNILSSLLGIEHLVSLGTLVLRENRVESIDEVGRLSCLGDLRNLDLRRNPVMETASRRHG--GGRSGDRGS--GSPRADVVAVLPQLVTLDGRGVREDERLPHR 311

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A4W3J0U9_CALMI (Uncharacterized protein n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J0U9_CALMI)

HSP 1 Score: 77.4 bits (189), Expect = 2.820e-12
Identity = 58/151 (38.41%), Postives = 78/151 (51.66%), Query Frame = 0

Query:    6 TRAFLEKVVQGSGWSLAEVEGLSLE----EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 152
            T A++    Q   +   EVE LSL+    + I SL  +F   +RL  L+L+RN + SL G+E+L SL  L +  N V S  E+ RL  LTNLRELDLRLNP+              + N        R  V+ +LP L  LD R + E+ER
Sbjct:    9 TEAWIRDRAQLGSYRADEVESLSLQGTYSDKIVSLGDAFQNFKRLKCLDLSRNSIDSLGGLEYLPSLEKLNMYYNNVASSKEISRLCYLTNLRELDLRLNPV--------------TRNEDNF----RLFVVHMLPNLQRLDDRLVRESER 141

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A4W3ICF8_CALMI (Uncharacterized protein n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3ICF8_CALMI)

HSP 1 Score: 77.4 bits (189), Expect = 3.070e-12
Identity = 58/151 (38.41%), Postives = 78/151 (51.66%), Query Frame = 0

Query:    6 TRAFLEKVVQGSGWSLAEVEGLSLE----EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 152
            T A++    Q   +   EVE LSL+    + I SL  +F   +RL  L+L+RN + SL G+E+L SL  L +  N V S  E+ RL  LTNLRELDLRLNP+              + N        R  V+ +LP L  LD R + E+ER
Sbjct:    9 TEAWIRDRAQLGSYRADEVESLSLQGTYSDKIVSLGDAFQNFKRLKCLDLSRNSIDSLGGLEYLPSLEKLNMYYNNVASSKEISRLCYLTNLRELDLRLNPV--------------TRNEDNF----RLFVVHMLPNLQRLDDRLVRESER 141

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A4X1TK91_PIG (LRRcap domain-containing protein n=2 Tax=Suidae TaxID=9821 RepID=A0A4X1TK91_PIG)

HSP 1 Score: 73.6 bits (179), Expect = 5.280e-11
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 0

Query:   11 EKVVQGSGWS----LAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 152
            EK+ + SG +    LAE++ LS+    +E I+ L SSF  L  L  L+L+RN L SL G+E+L +L +L L  NR+ S+ EV+RL  L  L ++DLRLNP++ + +                    R  V+ +LP L  LD R + E ER
Sbjct:   12 EKIREKSGLAPHCDLAELQSLSIPGTYQEKITHLGSSFMNLLSLKSLDLSRNSLVSLEGIEYLTALESLNLYCNRISSLAEVFRLRSLAALSDVDLRLNPVVKSEADY------------------RLFVVHMLPGLRQLDDRPVRERER 143

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A287AET6_PIG (Centrosomal protein 72 n=7 Tax=Sus scrofa TaxID=9823 RepID=A0A287AET6_PIG)

HSP 1 Score: 73.6 bits (179), Expect = 5.390e-11
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 0

Query:   11 EKVVQGSGWS----LAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 152
            EK+ + SG +    LAE++ LS+    +E I+ L SSF  L  L  L+L+RN L SL G+E+L +L +L L  NR+ S+ EV+RL  L  L ++DLRLNP++ + +                    R  V+ +LP L  LD R + E ER
Sbjct:   12 EKIREKSGLAPHCDLAELQSLSIPGTYQEKITHLGSSFMNLLSLKSLDLSRNSLVSLEGIEYLTALESLNLYCNRISSLAEVFRLRSLAALSDVDLRLNPVVKSEADY------------------RLFVVHMLPGLRQLDDRPVRERER 143

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: UPI000A2B034A (centrosomal protein of 72 kDa isoform X2 n=2 Tax=Suidae TaxID=9821 RepID=UPI000A2B034A)

HSP 1 Score: 73.6 bits (179), Expect = 5.700e-11
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 0

Query:   11 EKVVQGSGWS----LAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 152
            EK+ + SG +    LAE++ LS+    +E I+ L SSF  L  L  L+L+RN L SL G+E+L +L +L L  NR+ S+ EV+RL  L  L ++DLRLNP++ + +                    R  V+ +LP L  LD R + E ER
Sbjct:   12 EKIREKSGLAPHCDLAELQSLSIPGTYQEKITHLGSSFMNLLSLKSLDLSRNSLVSLEGIEYLTALESLNLYCNRISSLAEVFRLRSLAALSDVDLRLNPVVKSEADY------------------RLFVVHMLPGLRQLDDRPVRERER 143

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: UPI000A2AF0CC (centrosomal protein of 72 kDa isoform X1 n=2 Tax=Sus scrofa TaxID=9823 RepID=UPI000A2AF0CC)

HSP 1 Score: 73.6 bits (179), Expect = 5.960e-11
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 0

Query:   11 EKVVQGSGWS----LAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 152
            EK+ + SG +    LAE++ LS+    +E I+ L SSF  L  L  L+L+RN L SL G+E+L +L +L L  NR+ S+ EV+RL  L  L ++DLRLNP++ + +                    R  V+ +LP L  LD R + E ER
Sbjct:   12 EKIREKSGLAPHCDLAELQSLSIPGTYQEKITHLGSSFMNLLSLKSLDLSRNSLVSLEGIEYLTALESLNLYCNRISSLAEVFRLRSLAALSDVDLRLNPVVKSEADY------------------RLFVVHMLPGLRQLDDRPVRERER 143

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: UPI001B34FCF6 (centrosomal protein of 72 kDa isoform X5 n=1 Tax=Ochotona curzoniae TaxID=130825 RepID=UPI001B34FCF6)

HSP 1 Score: 73.2 bits (178), Expect = 7.040e-11
Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 0

Query:   11 EKVVQGSGWS----LAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 152
            EK+ + SG +    LAE++ LS+    +E I+ L +S   LR L  L+L+RN L SL G+++L +L +L L  N + S+ EV+RL  LT LR++D RLNP++ + S                    R  V+ +LP+L  LD R + ++ER
Sbjct:   12 EKIREKSGLAPHRDLAELQSLSVPGTYQEKITHLGTSLMKLRGLRSLDLSRNSLVSLEGIQYLTALESLNLYYNSISSLSEVFRLHCLTELRDVDFRLNPVVKSESDY------------------RLFVVHMLPRLQQLDDRPVRDSER 143

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BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A8B6BZW5_MYTGA (Centrosomal protein CEP72 n=3 Tax=Mytilus TaxID=6548 RepID=A0A8B6BZW5_MYTGA)

HSP 1 Score: 73.2 bits (178), Expect = 7.370e-11
Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 0

Query:    5 LTRAFLEKVVQGSGWSLAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRAD----VITVLPQLSILDGRGIHENER 152
            LT   +   V     +L +V+ LSL     E +  L SSF    RL  L+L+RN ++ L G+EHL+ L  L L  N ++S +E+ RL   TNL+ELDLRLNP+                       R  AD    +I +LP L  LD RG+ + ER
Sbjct:    5 LTEEIIRNRVNLQHDNLEDVKALSLPGTYHEKVVELGSSFRKFSRLKSLDLSRNTITCLKGIEHLKLLEKLNLYYNSIESFEELKRLRFNTNLKELDLRLNPVT----------------------RTEADYRLYLIHMLPNLQKLDDRGVRDRER 138

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FTU9_ECTSI	7.130e-56	57.27	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5JQB1_9PHAE	1.080e-50	69.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A4W3J0U9_CALMI	2.820e-12	38.41	Uncharacterized protein n=2 Tax=Callorhinchus mili...	[more]
A0A4W3ICF8_CALMI	3.070e-12	38.41	Uncharacterized protein n=2 Tax=Callorhinchus mili...	[more]
A0A4X1TK91_PIG	5.280e-11	37.33	LRRcap domain-containing protein n=2 Tax=Suidae Ta...	[more]
A0A287AET6_PIG	5.390e-11	37.33	Centrosomal protein 72 n=7 Tax=Sus scrofa TaxID=98...	[more]
UPI000A2B034A	5.700e-11	37.33	centrosomal protein of 72 kDa isoform X2 n=2 Tax=S...	[more]
UPI000A2AF0CC	5.960e-11	37.33	centrosomal protein of 72 kDa isoform X1 n=2 Tax=S...	[more]
UPI001B34FCF6	7.040e-11	36.00	centrosomal protein of 72 kDa isoform X5 n=1 Tax=O...	[more]
A0A8B6BZW5_MYTGA	7.370e-11	35.90	Centrosomal protein CEP72 n=3 Tax=Mytilus TaxID=65...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 10..169 e-value: 1.9E-22 score: 81.0
None	No IPR available	PANTHER	PTHR18849	LEUCINE RICH REPEAT PROTEIN	coord: 22..190
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 32..149
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 67..88 score: 6.341
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 92..114 score: 5.933
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 45..66 score: 7.727

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig964	contig	P-lacustris_contig964:60400..62123 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig964.15983.1	mRNA_P-lacustris_contig964.15983.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig964 53264..63351 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig964.15983.1 ID=prot_P-lacustris_contig964.15983.1|Name=mRNA_P-lacustris_contig964.15983.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=287bp
MPGELTRAFLEKVVQGSGWSLAEVEGLSLEEGISSLQSSFDGLRRLVYLN
LARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRL
NPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHEN
ERLQQRRQQQQQKEILSPEQHKCRPGQHYQGRSTLFAATPTTATVDNSSS
MGEPDGLMKTTPRVDSIFGRSQSGRDFYNNEFPPEAVAVTAAASRGQQVS
HKNASSWPHAHPRTDTTVTTEQAIQAFLFPPQRQLQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt