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Homology
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: D7FTU9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU9_ECTSI) HSP 1 Score: 202 bits (515), Expect = 1.730e-51 Identity = 126/220 (57.27%), Postives = 141/220 (64.09%), Query Frame = 2
Query: 122 MPGELTRAFLEKVVQGSGWSLAEVEGLSLE-EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENERLQQRXXXXXXKEILSPEQHKCRPGQHYQGR---------STLFAATPTTATVDNSSSMGEPDGLMKT 751
M G+LTRAFLE+VV+GSGWSLAEVE LSLE EGI SL+ S GLRRLVYLNLARN LSSLLG+EHL SL TLVLRENRV+SIDEV RL L +LR+LD+RLNP+M SR G G SG S GRPRADV+ VLPQL LDGRG+ E+ERL H+ R GQ YQ S F A P T+ GEP GL T
Sbjct: 1 MSGDLTRAFLEEVVRGSGWSLAEVESLSLEGEGIRSLRGSLGGLRRLVYLNLARNNLSSLLGIEHLVSLGTLVLRENRVESIDEVGRLSCLGDLRDLDIRLNPVMATASRRHG--GGRSGGSGS--GRPRADVVAVLPQLVTLDGRGVREDERLP----------------HRPRRGQQYQXXXXXWQQQRGSARFPAWPATSARSPRPRTGEPKGLATT 200
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A6H5JQB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB1_9PHAE) HSP 1 Score: 192 bits (488), Expect = 2.540e-47 Identity = 112/171 (65.50%), Postives = 124/171 (72.51%), Query Frame = 2
Query: 80 LADDSLPRLCSEGEMPGELTRAFLEKVVQGSGWSLAEVEGLSLE-EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENERLQQR 589
L D L + MP +LTRAFLEKVV+GSGWSLAEVE LSLE EGI SL+ S GLRRLVYLNLARN LSSLLG+EHL SL TLVLRENRV+SIDEV RL L +LR LDLR NP+M SR G G SG+ G PRADV+ VLPQL LDGRG+ E+ERL R
Sbjct: 145 LRDSRLTGSAQDKNMPSDLTRAFLEKVVRGSGWSLAEVESLSLEGEGIRSLRGSLGGLRRLVYLNLARNILSSLLGIEHLVSLGTLVLRENRVESIDEVGRLSCLGDLRNLDLRRNPVMETASRRHG--GGRSGDRGS--GSPRADVVAVLPQLVTLDGRGVREDERLPHR 311
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A4W3J0U9_CALMI (Uncharacterized protein n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J0U9_CALMI) HSP 1 Score: 77.8 bits (190), Expect = 4.050e-11 Identity = 58/151 (38.41%), Postives = 78/151 (51.66%), Query Frame = 2
Query: 137 TRAFLEKVVQGSGWSLAEVEGLSLE----EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 577
T A++ Q + EVE LSL+ + I SL +F +RL L+L+RN + SL G+E+L SL L + N V S E+ RL LTNLRELDLRLNP+ + N R V+ +LP L LD R + E+ER
Sbjct: 9 TEAWIRDRAQLGSYRADEVESLSLQGTYSDKIVSLGDAFQNFKRLKCLDLSRNSIDSLGGLEYLPSLEKLNMYYNNVASSKEISRLCYLTNLRELDLRLNPV--------------TRNEDNF----RLFVVHMLPNLQRLDDRLVRESER 141
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A4W3ICF8_CALMI (Uncharacterized protein n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3ICF8_CALMI) HSP 1 Score: 77.8 bits (190), Expect = 4.830e-11 Identity = 58/151 (38.41%), Postives = 78/151 (51.66%), Query Frame = 2
Query: 137 TRAFLEKVVQGSGWSLAEVEGLSLE----EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 577
T A++ Q + EVE LSL+ + I SL +F +RL L+L+RN + SL G+E+L SL L + N V S E+ RL LTNLRELDLRLNP+ + N R V+ +LP L LD R + E+ER
Sbjct: 9 TEAWIRDRAQLGSYRADEVESLSLQGTYSDKIVSLGDAFQNFKRLKCLDLSRNSIDSLGGLEYLPSLEKLNMYYNNVASSKEISRLCYLTNLRELDLRLNPV--------------TRNEDNF----RLFVVHMLPNLQRLDDRLVRESER 141
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A4X1TK91_PIG (LRRcap domain-containing protein n=2 Tax=Suidae TaxID=9821 RepID=A0A4X1TK91_PIG) HSP 1 Score: 73.6 bits (179), Expect = 7.800e-10 Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 2
Query: 152 EKVVQGSGWS----LAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 577
EK+ + SG + LAE++ LS+ +E I+ L SSF L L L+L+RN L SL G+E+L +L +L L NR+ S+ EV+RL L L ++DLRLNP++ + + R V+ +LP L LD R + E ER
Sbjct: 12 EKIREKSGLAPHCDLAELQSLSIPGTYQEKITHLGSSFMNLLSLKSLDLSRNSLVSLEGIEYLTALESLNLYCNRISSLAEVFRLRSLAALSDVDLRLNPVVKSEADY------------------RLFVVHMLPGLRQLDDRPVRERER 143
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A287AET6_PIG (Centrosomal protein 72 n=7 Tax=Sus scrofa TaxID=9823 RepID=A0A287AET6_PIG) HSP 1 Score: 73.6 bits (179), Expect = 8.110e-10 Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 2
Query: 152 EKVVQGSGWS----LAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 577
EK+ + SG + LAE++ LS+ +E I+ L SSF L L L+L+RN L SL G+E+L +L +L L NR+ S+ EV+RL L L ++DLRLNP++ + + R V+ +LP L LD R + E ER
Sbjct: 12 EKIREKSGLAPHCDLAELQSLSIPGTYQEKITHLGSSFMNLLSLKSLDLSRNSLVSLEGIEYLTALESLNLYCNRISSLAEVFRLRSLAALSDVDLRLNPVVKSEADY------------------RLFVVHMLPGLRQLDDRPVRERER 143
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A8B6BZW5_MYTGA (Centrosomal protein CEP72 n=3 Tax=Mytilus TaxID=6548 RepID=A0A8B6BZW5_MYTGA) HSP 1 Score: 73.6 bits (179), Expect = 8.390e-10 Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 2
Query: 134 LTRAFLEKVVQGSGWSLAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRAD----VITVLPQLSILDGRGIHENER 577
LT + V +L +V+ LSL E + L SSF RL L+L+RN ++ L G+EHL+ L L L N ++S +E+ RL TNL+ELDLRLNP+ R AD +I +LP L LD RG+ + ER
Sbjct: 5 LTEEIIRNRVNLQHDNLEDVKALSLPGTYHEKVVELGSSFRKFSRLKSLDLSRNTITCLKGIEHLKLLEKLNLYYNSIESFEELKRLRFNTNLKELDLRLNPVT----------------------RTEADYRLYLIHMLPNLQKLDDRGVRDRER 138
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A0B6ZU39_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZU39_9EUPU) HSP 1 Score: 73.6 bits (179), Expect = 8.740e-10 Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 2
Query: 134 LTRAFLEKVVQGSGWSLAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 577
LT A + V S +L +++ LSL E I S+ +S RL L+L+RN L SL G+EHL+ + L L N V S++E+ RL TNL+E+DLRLNP+ + N R +I +LP L LD R + + ER
Sbjct: 7 LTEALIRSRVNLSHENLEDIKSLSLPGTYHEKIVSIGTSLRRFTRLKSLDLSRNALESLQGLEHLQMIEKLNLYYNNVSSLEELKRLKHNTNLKEIDLRLNPV--------------TRNEPDY----RLYLIHMLPNLQKLDDRAVRDRER 140
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: UPI000A2B034A (centrosomal protein of 72 kDa isoform X2 n=2 Tax=Suidae TaxID=9821 RepID=UPI000A2B034A) HSP 1 Score: 73.6 bits (179), Expect = 9.100e-10 Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 2
Query: 152 EKVVQGSGWS----LAEVEGLSL----EEGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 577
EK+ + SG + LAE++ LS+ +E I+ L SSF L L L+L+RN L SL G+E+L +L +L L NR+ S+ EV+RL L L ++DLRLNP++ + + R V+ +LP L LD R + E ER
Sbjct: 12 EKIREKSGLAPHCDLAELQSLSIPGTYQEKITHLGSSFMNLLSLKSLDLSRNSLVSLEGIEYLTALESLNLYCNRISSLAEVFRLRSLAALSDVDLRLNPVVKSEADY------------------RLFVVHMLPGLRQLDDRPVRERER 143
BLAST of mRNA_P-lacustris_contig964.15983.1 vs. uniprot
Match: A0A8J4SQP6_9TREM (Uncharacterized protein n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4SQP6_9TREM) HSP 1 Score: 70.5 bits (171), Expect = 9.540e-10 Identity = 53/152 (34.87%), Postives = 79/152 (51.97%), Query Frame = 2
Query: 134 LTRAFLEKVVQGSGWSLAEVEGLSLE----EGISSLQSSFDGLRRLVYLNLARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRLNPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHENER 577
+T +++ + G +L +++ L LE E ISSL S+ RL L+++RN L S+ G+EH+ +L L L N +D + E+ RL TNLR+LDLRLNP+ LD R + +LP+L LD R I + ER
Sbjct: 3 ITEKWIKNRAKIDGDNLEDIKTLILEGNFDEKISSLGSALLHFSRLKILDISRNLLKSIRGIEHIITLEVLNLYYNSIDDVTEIKRLQYNTNLRDLDLRLNPVARV-----SLDY-------------RLYLTHLLPKLKSLDCRPIRDGER 136
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Mammalia |
| Seed ortholog score | 77.4 |
| Seed ortholog evalue | 1.2e-11 |
| Seed eggNOG ortholog | 225400.XP_006762557.1 |
| Preferred name | CEP72 |
| KEGG ko | ko:K16532 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000086,GO:0000226,GO:0000278,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007098,GO:0007099,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010389,GO:0010564,GO:0015630,GO:0016043,GO:0022402,GO:0022406,GO:0022607,GO:0030030,GO:0030031,GO:0031023,GO:0031503,GO:0032879,GO:0032880,GO:0033036,GO:0033566,GO:0034451,GO:0034613,GO:0034629,GO:0042802,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0050789,GO:0050794,GO:0051179,GO:0051298,GO:0051640,GO:0051641,GO:0051726,GO:0060271,GO:0060341,GO:0065007,GO:0070727,GO:0070925,GO:0071840,GO:0097711,GO:0098534,GO:0120031,GO:0120036,GO:0140056,GO:1901987,GO:1901990,GO:1902749,GO:1903047,GO:1903827,GO:1904779 |
| EggNOG free text desc. | gamma-tubulin complex localization |
| EggNOG OGs | 28NHF@1,2QV2Y@2759,39VWX@33154,3BERK@33208,3CYD5@33213,3JF4S@40674,47Z3V@7711,497MV@7742 |
| Ec32 ortholog description | Hypothetical leucine rich repeat protein |
| Ec32 ortholog | Ec-02_002560.1 |
| COG Functional cat. | S |
| Best tax level | Mammalia |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03036 |
| Exons | 4 |
| Model size | 2210 |
| Cds size | 861 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817394.539695-UTR-P-lacustris_contig964:53263..53349 | 1622817394.539695-UTR-P-lacustris_contig964:53263..53349 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig964 53264..53349 + |
| 1693495033.8733246-UTR-P-lacustris_contig964:53263..53349 | 1693495033.8733246-UTR-P-lacustris_contig964:53263..53349 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig964 53264..53349 + |
| 1622817394.5514443-UTR-P-lacustris_contig964:60364..60399 | 1622817394.5514443-UTR-P-lacustris_contig964:60364..60399 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig964 60365..60399 + |
| 1693495033.8934865-UTR-P-lacustris_contig964:60364..60399 | 1693495033.8934865-UTR-P-lacustris_contig964:60364..60399 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig964 60365..60399 + |
| 1622817394.5976377-UTR-P-lacustris_contig964:62123..63351 | 1622817394.5976377-UTR-P-lacustris_contig964:62123..63351 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig964 62124..63351 + |
| 1693495033.9578085-UTR-P-lacustris_contig964:62123..63351 | 1693495033.9578085-UTR-P-lacustris_contig964:62123..63351 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig964 62124..63351 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817394.5618138-CDS-P-lacustris_contig964:60399..60435 | 1622817394.5618138-CDS-P-lacustris_contig964:60399..60435 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig964 60400..60435 + |
| 1693495033.9063156-CDS-P-lacustris_contig964:60399..60435 | 1693495033.9063156-CDS-P-lacustris_contig964:60399..60435 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig964 60400..60435 + |
| 1622817394.5742269-CDS-P-lacustris_contig964:60581..60725 | 1622817394.5742269-CDS-P-lacustris_contig964:60581..60725 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig964 60582..60725 + |
| 1693495033.9193163-CDS-P-lacustris_contig964:60581..60725 | 1693495033.9193163-CDS-P-lacustris_contig964:60581..60725 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig964 60582..60725 + |
| 1622817394.5871696-CDS-P-lacustris_contig964:61442..62123 | 1622817394.5871696-CDS-P-lacustris_contig964:61442..62123 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig964 61443..62123 + |
| 1693495033.9394433-CDS-P-lacustris_contig964:61442..62123 | 1693495033.9394433-CDS-P-lacustris_contig964:61442..62123 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig964 61443..62123 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig964.15983.1 >prot_P-lacustris_contig964.15983.1 ID=prot_P-lacustris_contig964.15983.1|Name=mRNA_P-lacustris_contig964.15983.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=287bp
MPGELTRAFLEKVVQGSGWSLAEVEGLSLEEGISSLQSSFDGLRRLVYLN LARNKLSSLLGVEHLESLATLVLRENRVDSIDEVWRLGGLTNLRELDLRL NPIMTAISRECGLDRGMSGNSSGIGGRPRADVITVLPQLSILDGRGIHEN ERLQQRRQQQQQKEILSPEQHKCRPGQHYQGRSTLFAATPTTATVDNSSS MGEPDGLMKTTPRVDSIFGRSQSGRDFYNNEFPPEAVAVTAAASRGQQVS HKNASSWPHAHPRTDTTVTTEQAIQAFLFPPQRQLQ* back to topmRNA from alignment at P-lacustris_contig964:53264..63351+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig964.15983.1 ID=mRNA_P-lacustris_contig964.15983.1|Name=mRNA_P-lacustris_contig964.15983.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10088bp|location=Sequence derived from alignment at P-lacustris_contig964:53264..63351+ (Pleurocladia lacustris SAG_25_93) GTGAAACCAACCTCAAACAATTGATTCTCCTTGTATATTAGGGGTTCGTT
CGTCGAGACAAGAGACGGACGTTGCGCGACTTGCAGGTGAGGTCGTGAGG
TCCACCCCATCAACAAGGTTGACCCCCTTGAATTTCAACTCAACGCCAAC
GCTAAAATTCCATCATTACTTGCAGCTGATGCGACTGAGAGAGGGAAGGT
AAACATACATAAAACAGGACGCAGCAAACCTTGCTTTGGTGCTACATGTA
ACTCTGCTGTAGACAGAGGACACATCCAGATCCTGGATCGAAGGACCAAG
ATCACTACCGCTGGAAGGATTTAACCTGACCAAAAGAGGTGACAAAAAGA
GGAAAGCGTACTTCCTCCAATAACTATGATATAGTCCGTGCCGCGATGTC
TGTATACGAAAATGGCAACTGCTACATGTTGTTTGTACTCCGAGTAGACC
TATTTGTCGAGACTAGTTTTTTTCGAAAATACTTGGTGACACAACGGCTT
TACGGCTTGTGCGGTAGGGTGAAAAATTGAGATGGGGGAAAATGAGATAG
GGGAAAATTAAAAATCCTGCTCGACCGTTTCTTACGCTGTGATATTTTCA
GGTTTTATTTGGGGGTCCTTTTCCAAACCCAAAATATTATTTGGGCTTCT
TACGCAGTGATATTTGGCCGAAAAAAAACTCCAAAATCCTAATCGACGAT
TCCAATCCAGGAATCCTAGCACTCGGCTAAGAAAATGGACCAATATATAA
TTCCATCTCGCTAATATTTTTGGGTTAGGAATTGGGGGTCAACCAGGGCC
AACCCACATTTCGTGCCAGAACGAGGAACTACACCTTCTGTTGCCCAAAC
ATAGGTCAACATCGTGAGGCCATACACAAACCCTCTGCAAGGATCGAAAA
TTCAGGGCGTTCTGCGTCTTGTTGGCCGCACACGACCCGAAAACGTCAAG
CTGCAACGTGGCTCTGGTGAGCCTCTTCTCTCTATGTGGTCCTCTCAGAG
AGCGTGCGTGCGTGGTTGAGGTCGGAATTTTCGTACACACATCAGTTTGT
TTTCCGGCCATAACTTTGCCAAGGAGGAAGCAACGGCAATAGCAAGGCTA
TCCCTAGAGAGGTGGAGAGTTGGTCCATCTCGCACGCCCAAGGTTAGGGG
CCGTGGGGTCTTGTGCGTGTCGGGAAAAATCATTGCAACTACCCCTCAAC
ATCACCGCGAGAGCCGTTGCCTCAAATTCGGCATGTTTTTTGCACACAAC
GGTTTAGTTTTCCCACCATAACTTTGCGAAGGAGGAAGCAACGGCAGTAA
CAAGGCTATCCCTTGAGAGGTGGAGAGTTGGTCCATCTCGCACGCCCAAG
GTTAGGGGCTGTGGGGTCTTTTGCATGTCGGGAAAAATCATTGCAACTAC
ACTCTCTCCCGCAAAAAAGACCAAACCAAAAAAGAGCCGTTTTTTTTGTG
ACTTCTGCACATGTAACCATTCATAAACGCATCGTAGAGAGAGCTTTACG
CCAACGATATCTAGAAACAGCAGTCACTGGTGTGTGGGTATACACATGCC
TTCTGCAGGCGTCCCAAAAACAGGGTGATCTGTGTCTTACCGACCGCGCA
CCAGCCGAAAACGTGAACCGAAGCATTCTGTTACCCACACAAGCTTGAAT
CAGCCTTTTTTTCACTGGAAAAAAAATACGTCTCCAGGGCCGTAAGAAGG
TCAATAATTATAATTCGGGCCTGCCCCACGAAATAATATCCAGTTTATAT
TTCCCCAAATAAAATCTGAAAATATCCACGAATTCTTGAAACAAAAAAGG
GCAAAATCCGTTTCTGGCCCAAAAACAATTTCTCAAGAGACGGATTTGTG
CCTTTTTCGTTTTAACAAAATTCGATTTCAAGAATCCGTGCGAGGTTGAG
ACGGATTCTAGGGCAGAATCCGTCTCGGATCTCACACGGATTCTTGAAAC
GAAAAAGTTCGACAGTCTCGGGGCACATTGTCATTGGTCAGCCGGTTAGC
GCGGTCGACCCATATTACTGAAGCACACACGTATGTCTATTTCCCAGCAG
TGCGTGCTTTAGCGCCAGCGCTTGTAGGCCTGCTGGGCGTCACCTGTGGC
CTAGGCAACGCACTTGTTCTGATCGCGGGTAGCGTGGTTCATCAACGAAA
ACTACAACGCGGACTCTGCACCACCACCGAGATCTCGCTACACACAATGC
CATGCCTCCCACAACTTGCCATGCCCACAGATATCACAATGGATCACACG
CTCGAAGTAGTTTGGTTGCGATCGGTGCCCCAGAGGCCGAGAACCGGGTG
ACGGTGTGTGCAGTTTGTGTTGCTTTTGCTGCCCATAGGCCAGAGGCGCT
AGGTGCAAGACAAACTAAACGGATTACTTCTGCATCACCACCGAGCTCTC
GCTACGCACAATGCCCATGCTCCCCACAACTGCCATGCCCACAGATATCA
CAATGGATCACACGCTCGAAGTAGTTTGTTTGCGATCGGTGCCCCAGAGG
CCGAGAACTGGGTGACGGTGTGTGCTGTTTGTGTTGCTGTTGCTGGCCAC
AGGCCACAGGCACCAGGTGAAAAAAACAAAAAAACGGATTACTTCTGCAT
CACCGCCAAGCTCTCGCCACACACAATACCCATGCCCCCCACAACTGCCA
CGTCCATAGATATCACAATGAATATCACGCTCGAAGTGGTTTGGTTGCGA
TCGGCGACCCAGAGGCCGAGAACCGGGTGACGGTGTGCTGTTTGTGCTGT
TTAAGGCTGACCTCGGGCCAATGGCGCCTGAAAATATTTTCTGACTTGAA
AATCCGTTTGCTATAAGAAAGGCAGCATGTCCGCCCAGGTGAAAAAAAAC
TGAAAACGGATTTCGCCCTCTTTCGTTTCAAGAATCCGTCTCTATAAGAA
ACGACCTAAACGGATTTTCAAGTCAAAAAATATTTTCAGGGGCCATTGGC
CCGAGGTCAGCTTCAAGCAGCACAAACAGCACACCGTCACCCGGTTCTCG
GCCCTGGGTCGCCAATCGCAATCAAACCACTCCGAGCGTGTTATTCATTG
TGATATCTGTGAGCATGGCAGTTGTGGGGGCATGGGTATTGTGTGTGGCG
AGAGCTTGCGGTGATGCAGAAGTAATCCGTCTAGTTTTTTTTGTTTTTTT
CACCTGGTGCCTGTGGCCTGTGGCCAGCAACAGCAACACAAACAGCACAC
ACCGTCACCCGGTTCTCGGCCTCTGGGGCACCGATCGCAACCAAACTACT
CCGAGCGTGATCCATCGTGATATCTGTGGGCATGGCAGCTGTGGGGAGCA
TGGGCATTGTGCGTAGCGAGAGCTCGGTGGTGATGCAGAAGTAGTCCGTT
TAGTTTTTTTCACCTGGCGCCTCTCGCCTGTGGGCAGCACAAGCAACACA
AACTGCACACACCGTCACCCGGTTCTCGGCCTCTGGGGCACCGATCGCAA
CCAAACTACTTCGAGCGTGTGATCCATTGTGATATCTGTGGGCATGGCAA
GTTGTGGGAGGCATGGCATTGTGTGTAGCGAGATCTCGGTGGTGGTGCAG
AGTCCGCGTTGTAGTTTTCGTTGATGAACCACGCTACCCGCGATCAGAAC
AAGTGCGTTGCCTAGGCCACAGGTGACGCCCAGCAGGCCTACAAGCGCTG
GCGCTAAAGCACGCACTGCTGCGAGATAGACATACGTGTGCGTAAGCGTG
CTTCAGTATTGCGGGTCGACCACGCTAACCGGCTGACCAATGACAATGTG
CCCCGAGACTCGAACTTTTTCGTTTCAAGAATCCGTGTGAGATCCGAGAC
GGATTCTGCCCTAGAATCCGTCTCAACCTCGCACGGATTCTTGAAATCGG
ATTTTGTTGAAGCGAAAAAGGAACAAATCCGTCTCTATAAGAAACTGTTT
TGGGGGCAGACACGGATTTTGCCCTTTTCAAGAATCCGTCTCTATAAGAA
ACGGCCTTAGGGCCTGTATTAACCAAGCTACCAAAATAAAAATAAAAATA
AAAATAAGGAGGCGTTTCGGGCCTGGTTCTCGCGATTTTGGGCTTCCTGG
GGGCGCCGCAGAGGGCCTGAGGTGTCGAGACCGGGTCCCCAGGTTTCACA
CAAGTGTTGTGCGTTTGTAGTCTTGTTACTTTCGAGTATGTTTGTTTTTT
CCTCGACTTCCTTTTCCTGCACTGCGGCCGCTACAGCACACCGCCGTGAC
GTATGAAGGTACCCTCGGGTAGCTGAGATCAGGGTTTACCTCTTCCGCCC
AGTAGAGCGAGAGAAGACAGTGTGTATGGCGCTCGGGGGGGAAGAACCAG
CGAGAATCAGCTCCAAAAAAATATCAGAAAGAGATGGAGGCTTTCCTTCA
AATTGGGAGAATTCCCCGCGCTATCCCCGGGCAACCGGTCACGACAATCA
TTGACTTTAATTTTAATTTCAAGAAAAAATGTCTTGGGACTTTTTTTAAA
ATTATATTCAAAATGTGTGGTTCCATGATTATGACGTTCACGCCTCGTGG
AAGCCTCCTGGGCCAATCACAGCTCGATTTCCAATTTTAATTTTGGGAAC
ATCGTTAATACACGGCCTTAAAGGTATTCTGTATGCATACAAAAACGCTC
CGAAAACCTGTAGTAAAAATGAAAACGTGGCTCTGAAAATACCGAGTGCA
TCTGCTCTCATTGTTGTCACGACCTCATAAGTCATAACATCATAATCTCT
GACCTCCGCATGCAATCAACAGGTGGTCCACTTGCTACCGATTGCCCCCT
CCCCCCCCTTTACGTCGCACGCCCGCTCCTTGCCATTCTATAAAATAAAC
CTGCCTTATCAACCGATGTATTCCCTGCGTTACGCGTCACTGTCAGGAGG
ATTGCTGCGTGTAAACTGGTGACCTCCCCTTCCGGTTCGTCTCTTGGCCG
GGTTTTTGTCCTTTTCCTTTGTTGGGTTTTTGTCCTTTTCCTTTGTTGGG
TTTTTGTCCTTTTCCTTTGTTGGGTTTTTGTCCTTTTCCTTTGTTGCATC
CGCCGCCAACGCCAACGCGGAGGACGCTATTTCAAGATCTATCTTCCATT
TTGTTGACCTCATGTTCGTTTGGACAGCGTCCCATTCCCGCCTCCCTTGC
TATTGTTTCGCCTATTGCAACAGCCCCATCGCGCCCAATCAAGTTGCACT
TCCCATTCTCCATGAGTAAGTAGCATGCTACGGTTTTAGACCTTCCTAGG
TAACCAGCGCTCTAAATGCTCTATATTCTCCAACGCTGGCCGTCAGTATA
CGTTACCAGTGGCGCACGTTCATCCAGCTGAGGATTGCCGGCCATCAGTT
CCAACACAACTTCGAAACCTCATGACCCACCGTAGCCGCAGATTCGTCGC
CAATCCCAATCAACGGTTACAACTCCTGCGAATGTTTTATTCAGCACGCG
GCACATCTTCTTGATCGTGGCTACCCTTAGATGTCTCGAAATGTACTTCG
ACCCTGTCAGCACATTCCCACGGAGCCGGTGTTGACAACTTAGTTTCTCC
CTTCCAAAGAAGACGGTGCCCCTCGTAAGGCCAAACTCCTCGAATCTTTT
CATTGCATGTGTATACACTTCCGAAGGGCGACACCGAAAAAAATTGATAC
GACCAAGCCCAGTCAGAGCGCGCGCCCACATTCGCCTCATTCCCGCGCAA
TGCTAATCCCGCCCCGTAAAATGTGGCCGAATTCTACGGCCTATTCTCCC
TTGCCAAACCCTCTAAAACGGATTTTCAGAAGTGGTGCTTCGTCGGAAGA
ACAGCCCCACCTTGCTTGTGAAAGTTTTTAACCGTTACTATCTTTCCGGC
AGTAGCTGCCATTTTATTGCCCACACAGATGATGGCAGCTACTTTGCTAG
TTCCGTTGCCTGATTGCCACATTTACTTTGTTATGATGCCCCTTCGCCCT
CGTTGCCTGATTGCCTCCGACCTGGTGTTGAGCCTCTCCTGTTAGCGACC
CACGCACGAGTCTCCCGTCCGCGTCTTGCTAACAACTGCCGCGAACTGCT
GTCCCAACCACGTCGTTATACCCCCTACTCTTTTCGGTGCGGAAACTTCC
TCGCAATTCCTTGCCCCCGTGCTACGCTAGGCATCCACGATTCAATCCCG
CCCCGCAAACCCTCTGTTTCCTTGGTTCAACTGTTGCGCATCTTTGCTGC
CGTCCAACAACGAGACTGACTTCATTCGCTTGGGACGGCAGCAAAAGTAC
ACCTTTTGTTTTTTCAGATTTTCCTGCATAATTGCCGAGTTTTAGTGGGA
AATCCTATGTTAACATGACATACGTCGCCCCGGTGGTCTAGTTGGCAACC
TCGCAACCTTTTTGTGGCTAGGTCTCGGGTTCGAATCTCGCTTCGTGAGT
AAGCAAAGTTCGTGATCAAACAAAATTCGATGTAGTTGTCGACGAGGGAA
AGGGACGGTAAAAATTAAACATGTATCCCAGGAGAACGGGTGGGCCTCAG
GGAGAGGAATCCTGCTGTGTGACCCCGGCTTGCTCCCCACTACATACAGT
ATCGCCGAAGGGGTAAAGAAAGGCTTGCGTCCAGAATATGTGGGAAGAAA
AAAACAAAATAACCCGTTCATTTGTTCGGAATCCTGAAAAAATGGGCATT
AGTTGCTGCCGTCTGAAGCGATAGTATCGTTTGTTGAACGGCGGCAGGGA
TGTCACGGTTTTCGCAGTTGTGTAGTGTATTACCAAAACCGATTCTATTC
CCTTAACGAAAACAATGTATTTTCGTTATTTTATCAAACATTGATGTTTT
GAAAAAGTCTAAGCAAAGCGATCACTCGTATACACACCGCCCAAGGACTA
TACCATGATTTTTGTTGAGCGGAAGCGGAATCACCTTTTCCTCTTATTAC
TGAGGTACATTTTTCCCAACTGTACGTATTTCCAGGACATTGTGAATAGA
TGCCATAGAGCACACGCGTCACGCAGCCACGCGTATTTACATTCAGGAGT
GTTTGATGTGGATGAATGAACAAGGTCCCAAATATCTACCGAACGCATGG
GCAAAGTCTACCCCCCTCCCCCACGCGCACGCCCACCCTGGCGGGAGATT
CTGACTCATGTTTGTACGCCTTGTCCTGTGGTGCTGTGGTGGCCGACACA
GACGATTCTCTGCCGCGACTCTGTTCGGAAGGAGAGATGCCCGGCGAGCT
CACCCGCGCGTTCCTGGAAAAGGTGACAGGGAGGAAGGAGTTAGCGTTGT
ATGAGTGGAACAAGGCCGACAAACGTACAATTGAGAACAAAGCTCTGACG
GACTGCTGTGTCCTCTGAATCTAGCTGCCTCTCTGCGCGGCACTATCTTA
TTCTTTTTGGTGCGGCAGGTGGTACAGGGCTCGGGTTGGAGCCTTGCGGA
GGTGGAGGGCTTGAGTCTGGAGGAGGGAATAAGTTCCCTTCAGAGCTCGT
TCGATGGCCTGCGTAGGCTGGTGTACCTGAATCTCGCACGGAACAAGCTG
TCGTCGTTACTGGTGGGTGTTGTCCGACGCCAGGTAGCCCGTCGCGATCC
TTCCCGAAAATGTTGTCACCATTGTTGTTTCCCTTCCGGGCATGAAATAG
AAAAGCCACCGTCAGGAAACTGCGAGTTTGTTCAGCACCACAGGCCTGGC
GCGGAGGCCAAGGAAAAACCACGGCCGCGCCGGTAACAAGCAAATAGGGA
AACCGTCCTCCCAAGCACCGAGCGATAGATACGTGTCTGGAAAGTGTGGA
TAACGCTAGAAACAGAAGCGCCAATCGGTCGATGGCTGTCTATGTGTTAG
CCTCGTTTTTTCTGTTTTCCTGTCGAGTCTGTCAGTGCGTTTTCTGAATG
TGACCATTGTCTCCCATATGCCTTTCCTATCCACGCAAAGAGGCGAAATT
CGTTTTAGTAACGAACGGGGTCAGCGTGGACAACCATTACCTTTTAGAAA
GGCATTGCGAGAGGTCGCTACGAACCCTACGGAAAAGCTCCGTGTCGTCC
ATGGCATATACCCTCCCTCCTCCAACTTCAGCGCAATTTCATAGTCGCAA
GACCTACAACTGTCAGTAGCCTATTTCAATCGAACATCGAACAAGAGTGT
GGAGTAAAGAACCCCCCCGCCCCACCACACAATAGAACAATGCATTGGAA
ACAGCTGTATTATTTCTCATGACCATTATCCAAATCCTTAGATACGCAGC
AGTTGAGAACGCCACCTCTTCGCCCCCAGGGTGTCGAGCACTTGGAGTCC
CTTGCAACATTGGTTCTGCGCGAGAATCGCGTGGATAGCATCGACGAGGT
CTGGCGACTCGGCGGCCTGACGAACTTGCGGGAGCTTGACCTGCGCCTCA
ACCCGATCATGACGGCGATATCCAGAGAGTGCGGTCTTGATCGTGGGATG
AGCGGCAACAGCAGCGGCATCGGCGGCAGGCCTCGCGCGGATGTCATTAC
GGTGTTGCCACAGCTGTCCATCCTGGATGGGCGGGGAATACACGAAAACG
AACGGCTTCAACAACGCCGGCAGCAGCAGCAACAGAAGGAAATTCTCAGC
CCGGAGCAACATAAGTGCCGGCCCGGGCAGCATTATCAGGGGCGTTCCAC
TCTGTTTGCGGCAACGCCTACTACGGCAACGGTCGACAATTCTTCGAGTA
TGGGGGAGCCCGACGGGCTAATGAAAACCACACCGCGAGTAGACTCGATC
TTCGGACGATCCCAGAGTGGGCGAGATTTTTACAACAACGAGTTTCCACC
GGAAGCGGTAGCGGTGACAGCGGCGGCATCGCGCGGCCAGCAGGTCAGCC
ACAAAAACGCGAGCAGTTGGCCTCACGCCCACCCGCGTACCGATACGACG
GTGACGACGGAGCAGGCGATTCAAGCCTTTTTATTCCCACCGCAGCGTCA
ACTGCAGTGACCTCGGCGAATACGATAGCGAAAGCTTCGTCTTCCGCGCT
CGATGACGAACGGAGAGTCTCCATGTCCGCCCGGCGAAACCCTCCCACCC
AAGCACGAAGCGACGGTGGCGGTGGATCCTCGAGACGCTTGAGGGAAAGG
CGGCAAGTATCAGGACGCTATGATAGCTATGACAGCTATGACAGCTATCA
CGCCACGCCCGAGGAGAGGAGGGAAAATGGCGGTGCTGAGGGGCACCGGG
AGCGGAATTCCCGCGAACTGCGCGTCGAAACAGTTGCGGCGCCCCCAGCG
ACAACCGGGAAGGGAGATCTTTTTTCGAACGCCCGGCCACGGTCGTCGTT
GGCGAGGCGAGGAAACGCGATCACCCAAGCGCCGAGGATGGCGGTAGCAA
AAGCAGCAGCACACGCAGCTTGAGCGGGGGTACGGCACCTGTCGTCAAGG
GTTGGAGCAGTGAGTCCCTGGTGCCTCTTGTCGACTTGTCTTCAGGTGGA
GCTCCGGCTGGCGGGCATCCCCCTCGTCGTCCGGAACCGCCACCACCTAC
AGCATTAAGGGAGGAACGTCGCGACGACGATGAATTCGCAGCCCTCTGGC
GTGAGCTAGGTACCGACGAATCGCTTGACAAGCCCATGACCTCGTCATCG
CTGTCCCCCTCGGCGGCGGCAAGCCAAATCAGACCCCAAACTACAGCCAG
AACCATCAGCACAAGCACGACAGCAGCCGCAGCCGCGCGCGCCGTGGAGG
CCTTCCGCCAGAGCTCCCAAAGGCTTGGCCTCCTCTGAGGCTACCCCAAC
CGCCGACGGTTGTTACGCCACCGGTGGTCGCCGTAGTTTCGCGACCGGTT
TTCATGATACTGACGGTGGTGATGCAAAGGCGCCCCGCCCAGGGCGGATG
TTGCACCCCTTCATGGTATCATCCGCCCGTAGCAACAGCGGTGCGGGCTT
ACGGGATAGGGATTGTTCCAACAAGGCTGGCGAGAGCCGTGGGAGTGGCT
TCTGTAGGCTGAAAGGTGCGACGAACAAGTGCGGCGATCACTCTATGCCT
GCTGCCGGCTCTTCTTCGGAAGCGGCGGTTGTGTCGTTGACCGATGTAGG
TTCGGACTCGCTGGAAACGGCTCTCGTTGCAACGTCAAGAAAGTGCCCGG
CATGCTCCGGTGAATATCGCGGGAGCGTCCAGGAGGCGTTGGCCATTGCA
GCAGCTGTGAGCGGTGGGGCGGTGGAGAGCGCTGAAGG back to topCoding sequence (CDS) from alignment at P-lacustris_contig964:53264..63351+ >mRNA_P-lacustris_contig964.15983.1 ID=mRNA_P-lacustris_contig964.15983.1|Name=mRNA_P-lacustris_contig964.15983.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1722bp|location=Sequence derived from alignment at P-lacustris_contig964:53264..63351+ (Pleurocladia lacustris SAG_25_93) ATGCCCGGCGAGCTCACCCGCGCGTTCCTGGAAAAGATGCCCGGCGAGCT CACCCGCGCGTTCCTGGAAAAGGTGGTACAGGGCTCGGGTTGGAGCCTTG CGGAGGTGGAGGGCTTGAGTCTGGAGGAGGGAATAAGTTCCCTTCAGAGC TCGTTCGATGGCCTGCGTAGGCTGGTGTACCTGAATCTCGCACGGAACAA GCTGTCGTCGTTACTGGTGGTACAGGGCTCGGGTTGGAGCCTTGCGGAGG TGGAGGGCTTGAGTCTGGAGGAGGGAATAAGTTCCCTTCAGAGCTCGTTC GATGGCCTGCGTAGGCTGGTGTACCTGAATCTCGCACGGAACAAGCTGTC GTCGTTACTGGGTGTCGAGCACTTGGAGTCCCTTGCAACATTGGTTCTGC GCGAGAATCGCGTGGATAGCATCGACGAGGTCTGGCGACTCGGCGGCCTG ACGAACTTGCGGGAGCTTGACCTGCGCCTCAACCCGATCATGACGGCGAT ATCCAGAGAGTGCGGTCTTGATCGTGGGATGAGCGGCAACAGCAGCGGCA TCGGCGGCAGGCCTCGCGCGGATGTCATTACGGTGTTGCCACAGCTGTCC ATCCTGGATGGGCGGGGAATACACGAAAACGAACGGCTTCAACAACGCCG GCAGCAGCAGCAACAGAAGGAAATTCTCAGCCCGGAGCAACATAAGTGCC GGCCCGGGCAGCATTATCAGGGGCGTTCCACTCTGTTTGCGGCAACGCCT ACTACGGCAACGGTCGACAATTCTTCGAGTATGGGGGAGCCCGACGGGCT AATGAAAACCACACCGCGAGTAGACTCGATCTTCGGACGATCCCAGAGTG GGCGAGATTTTTACAACAACGAGTTTCCACCGGAAGCGGTAGCGGTGACA GCGGCGGCATCGCGCGGCCAGCAGGTCAGCCACAAAAACGCGAGCAGTTG GCCTCACGCCCACCCGCGTACCGATACGACGGTGACGACGGAGCAGGCGA TTCAAGCCTTTTTATTCCCACCGCAGCGTCAACTGCAGTGAGGTGTCGAG CACTTGGAGTCCCTTGCAACATTGGTTCTGCGCGAGAATCGCGTGGATAG CATCGACGAGGTCTGGCGACTCGGCGGCCTGACGAACTTGCGGGAGCTTG ACCTGCGCCTCAACCCGATCATGACGGCGATATCCAGAGAGTGCGGTCTT GATCGTGGGATGAGCGGCAACAGCAGCGGCATCGGCGGCAGGCCTCGCGC GGATGTCATTACGGTGTTGCCACAGCTGTCCATCCTGGATGGGCGGGGAA TACACGAAAACGAACGGCTTCAACAACGCCGGCAGCAGCAGCAACAGAAG GAAATTCTCAGCCCGGAGCAACATAAGTGCCGGCCCGGGCAGCATTATCA GGGGCGTTCCACTCTGTTTGCGGCAACGCCTACTACGGCAACGGTCGACA ATTCTTCGAGTATGGGGGAGCCCGACGGGCTAATGAAAACCACACCGCGA GTAGACTCGATCTTCGGACGATCCCAGAGTGGGCGAGATTTTTACAACAA CGAGTTTCCACCGGAAGCGGTAGCGGTGACAGCGGCGGCATCGCGCGGCC AGCAGGTCAGCCACAAAAACGCGAGCAGTTGGCCTCACGCCCACCCGCGT ACCGATACGACGGTGACGACGGAGCAGGCGATTCAAGCCTTTTTATTCCC ACCGCAGCGTCAACTGCAGTGA back to top
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