prot_P-lacustris_contig940.15814.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig940.15814.1
Unique Nameprot_P-lacustris_contig940.15814.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length302
Homology
BLAST of mRNA_P-lacustris_contig940.15814.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 4.410e-77
Identity = 144/242 (59.50%), Postives = 163/242 (67.36%), Query Frame = 0
Query:    1 MGVGGLDMGRAPGHPVGLRLPTMRGAGAPVSPAIVSAPSITRGRGAGMGDGGADMRGAPGSPGYLSLAMT--SGMPPVSPAFVSPHSIALGSSATQPHPAPLLPVDTIAAPQTTASNGGFGGKRAAAEILSHGDLNLSPENDSEKQPRTDGPGTSASFLTGGRRKGQLTQQASRCHGCRNTKPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMEVSGEQGGFWCCLHSGKEWCPCANR 240
            MG  G+D+G A G PV LRL T  GA  P+SPA VSA SI    G  MG GGADMRGAPGS G    A    +GMPP+            G    QP PA  +P   +  PQTT S+GG GGKRAAAE L+H DL  + ++DS+ Q RTDGPGTSAS  TGGRRKGQL QQAS CHGCR  KPTG  RHACQGGD EG E RGCNYW+  +CMG+WM+ SG+  GFWCCLHSG+EWCPCA R
Sbjct:    1 MGDSGIDIGHAQGPPVSLRLATTCGAEMPISPANVSASSIASHPGPLMGVGGADMRGAPGSSGGFPRATMCGAGMPPLXXXXXXXXXXXPGPRRAQPRPALAMP-QLLPVPQTTVSSGGVGGKRAAAETLAHVDLIPTTDHDSDNQRRTDGPGTSASTSTGGRRKGQLAQQASTCHGCRINKPTGNVRHACQGGD-EGGEARGCNYWVRQKCMGRWMQASGQPRGFWCCLHSGREWCPCAER 240          
BLAST of mRNA_P-lacustris_contig940.15814.1 vs. uniprot
Match: A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 9.280e-67
Identity = 114/175 (65.14%), Postives = 130/175 (74.29%), Query Frame = 0
Query:   72 GMPPVSPAFVSPHSIALGSSATQPHPAPLLPVDTIAAPQTTASNGGFGGKRAAAEILSHGDLNLSPENDSEKQPRTDGPGTSASFLTGGRRKGQLTQQASRCHGCRNTKPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMEVSGEQGGFWCCLHSGKEWCPCANRKAKTES 246
            GMPP+SPA VS  SIA G    QP PA  +P   +  PQTT S+GG GGKRAAAE L+H DL  + ++DS+ Q RTDGPGTSAS  TGGRRKGQL QQAS CHGCR  KPTG  RHACQGGD EG E RGCNYW+C +CMG+WM+ SG+  GFWCCLHSG+EWCPCA R +   S
Sbjct:  158 GMPPLSPANVSAPSIAPGPRRAQPRPALAMP-QLLPVPQTTVSSGGVGGKRAAAETLAHVDLIPTTDHDSDNQRRTDGPGTSASTSTGGRRKGQLAQQASTCHGCRINKPTGNVRHACQGGD-EGGEARGCNYWVCQKCMGRWMQASGQPRGFWCCLHSGREWCPCAERVSTKRS 330          
BLAST of mRNA_P-lacustris_contig940.15814.1 vs. uniprot
Match: D7FN79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN79_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 3.120e-27
Identity = 67/142 (47.18%), Postives = 84/142 (59.15%), Query Frame = 0
Query:  100 LLPVDTIAAPQTTASNGGFGGKRAAAEILSHGDLNLSPENDSEKQPRTDGPGTSASFLTGGRRKGQLTQQASRCHGCRNTKPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMEVSGEQGGFWCCLHSGKEWCPCANRK 241
             +P+ T  APQTT ++GG    R A   + H +LN S E +S +Q      G S+S  TGGRRKGQL +QA  CHGCR  KP    ++AC    ++G   R  NYWLC  C  +W E SG  G F CCLH GK+WCPC +RK
Sbjct:  160 FIPIRTSPAPQTTGTSGGVRENRGAGTFV-HENLNSSVEPESNRQLAAAVLGMSSSVSTGGRRKGQLREQAKSCHGCRTNKPGQGIKYAC----VDGRNPR-WNYWLCKSCFKEWTEASGVDG-FLCCLHRGKQWCPCNSRK 294          
BLAST of mRNA_P-lacustris_contig940.15814.1 vs. uniprot
Match: A0A6H5KAW8_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW8_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.030e-16
Identity = 45/88 (51.14%), Postives = 53/88 (60.23%), Query Frame = 0
Query:  153 SASFLTGGRRKGQLTQQASRCHGCRNTKPTGQARHACQGGDLEGDEMRGCNYWLCHRCMGKWMEVSGEQGGFWCCLHSGKEWCPCANR 240
            S+S  TGGRRKGQLT++A  CH CR   P    ++AC      GD    C YWLC +C+ +W E SG  G F CCLH G  WCPC NR
Sbjct:    2 SSSVSTGGRRKGQLTEEARTCHECRTKDPRQGIKNAC------GDSA--CCYWLCQKCLERWTEQSGRDG-FQCCLHYGSLWCPCKNR 80          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig940.15814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6Z2_9PHAE4.410e-7759.50CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L8M0_9PHAE9.280e-6765.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN79_ECTSI3.120e-2747.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAW8_9PHAE1.030e-1651.14CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig940contigP-lacustris_contig940:2503..3426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig940.15814.1mRNA_P-lacustris_contig940.15814.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig940 2386..3737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig940.15814.1 ID=prot_P-lacustris_contig940.15814.1|Name=mRNA_P-lacustris_contig940.15814.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=302bp
MGVGGLDMGRAPGHPVGLRLPTMRGAGAPVSPAIVSAPSITRGRGAGMGD
GGADMRGAPGSPGYLSLAMTSGMPPVSPAFVSPHSIALGSSATQPHPAPL
LPVDTIAAPQTTASNGGFGGKRAAAEILSHGDLNLSPENDSEKQPRTDGP
GTSASFLTGGRRKGQLTQQASRCHGCRNTKPTGQARHACQGGDLEGDEMR
GCNYWLCHRCMGKWMEVSGEQGGFWCCLHSGKEWCPCANRKAKTESASAK
APAFVFERKSVSHVRMLPATPIFPPPYSESRVSIPQPLVTPPRHYHLAAL
T*
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