prot_P-lacustris_contig93.15726.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig93.15726.1
Unique Nameprot_P-lacustris_contig93.15726.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length204
Homology
BLAST of mRNA_P-lacustris_contig93.15726.1 vs. uniprot
Match: A0A6H5L6J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J2_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.340e-57
Identity = 107/129 (82.95%), Postives = 111/129 (86.05%), Query Frame = 0
Query:    1 GLGEGFVEACLSVLGWSPQGVIEAILEDRLPPQVASLHRGLRRAWKSKKGDLDKAYRVDKDLAAAEAKRLIAMENRQEDDAYLLDREYDDXXXXXXXX----REVDVGGGG-RGDDLETVRRVNQLIRQ 124
            GLGEGFVEACLSVLGWSPQGVIEA+LEDRLPPQVA+L+RGLRRAWK KKGDLDKAYRVDKDLAAAEAKRLIAME RQEDDAYLL REYDD            REVDVGGGG RG D ETVRRVNQL+RQ
Sbjct:  362 GLGEGFVEACLSVLGWSPQGVIEAVLEDRLPPQVANLNRGLRRAWKGKKGDLDKAYRVDKDLAAAEAKRLIAMEKRQEDDAYLLSREYDDDYDDQAWREYDDREVDVGGGGGRGSDFETVRRVNQLVRQ 490          
BLAST of mRNA_P-lacustris_contig93.15726.1 vs. uniprot
Match: A0A7S2AVJ1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AVJ1_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.510e-8
Identity = 48/133 (36.09%), Postives = 70/133 (52.63%), Query Frame = 0
Query:    1 GLGEGFVEACLSVLGWSPQGVIEAILEDRLPPQVASLHRGLRRAWKSKKG--DLDKAYRV-----DKDLAAAEAKRLIA-MENRQEDDAYLLDREYDDXXXXXXXXREVDVGGGGRGDDLETVRRVNQLIRQE 125
            GLG GFVEA L    +S   V+ A+L+D LPPQ+  + R L R   S+K   D+D  Y V     D D+   + ++LI  M+  +ED+A++L REYDD          V      +  + E  RR+N +IR +
Sbjct:    1 GLGAGFVEAMLVFHDFSVARVVAAVLDDNLPPQLEGMDRKLGRYRVSRKDLKDIDAGYSVGSQARDDDVLREKQRQLIRNMDRDEEDNAWVLSREYDDDFDDQFD--NVVSFEVCKETEQENTRRMNSIIRDK 131          
BLAST of mRNA_P-lacustris_contig93.15726.1 vs. uniprot
Match: A0A4D9DC10_9STRA (CUE domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC10_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 9.330e-8
Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = 0
Query:    1 GLGEGFVEACLSVLGWSPQGVIEAILE-DRLPPQVASLHRGLRRAWKS----KKGDLDKAYRVDKDLAAAEAKRLIAMENRQEDDAYLLDREYDDXXXXXXXXREVDVGGGGRGDDLETVRRVNQLIRQE 125
            GLGEGFV ACL+V+G++   V+ A+LE   LP  + +L R L     +    KKG  +     D++  A +   L  ME   E+DAYLL +EYDD         +         +D E +R+ N L+R+E
Sbjct:  433 GLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSLPSPLGADKLRKKGREEAEEARDEEFIARQKAYLRQMEKDAEEDAYLL-QEYDDDFDDQYAGEQTMFSRDTTREDFEAIRKYNNLMRKE 561          
BLAST of mRNA_P-lacustris_contig93.15726.1 vs. uniprot
Match: A0A7S2BCH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCH7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.630e-7
Identity = 51/131 (38.93%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    2 LGEGFVEACLSVLGWSPQGVIEAILEDRLPPQVASLHRGLRR----AWKSKKGD--LDKAYRVDKDLAAAEAKRLIAMENRQ-EDDAYLLDREYDDXXXXXXXXREVDVGGGGRGDDLETVRRVNQLIRQE 125
            LGEGFVE CL+   +S + V+  ILED LPPQ+A + R  +R      K ++G+  +    + D D A A+   L  ME  + E +A+L+    D XXXXXXXX   ++G   R  DLE  ++ N  IR++
Sbjct:    1 LGEGFVEVCLAFHDFSVETVVNKILEDDLPPQLADMDRTTKRFRVNMGKVERGNFTVGTTVKADDDFAQAQKAYLRQMEEEEHEKEAFLMAEYNDXXXXXXXXXNNFEIGHSDR--DLEATKKSNAAIREK 129          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig93.15726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6J2_9PHAE1.340e-5782.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2AVJ1_9STRA3.510e-836.09Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9DC10_9STRA9.330e-835.38CUE domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2BCH7_9STRA4.630e-738.93Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.10coord: 1..30
e-value: 1.8E-7
score: 32.7
NoneNo IPR availablePANTHERPTHR21494ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100coord: 2..203
NoneNo IPR availablePANTHERPTHR21494:SF0ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2coord: 2..203
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 2..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig93contigP-lacustris_contig93:226255..231374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig93.15726.1mRNA_P-lacustris_contig93.15726.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig93 226253..231374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig93.15726.1 ID=prot_P-lacustris_contig93.15726.1|Name=mRNA_P-lacustris_contig93.15726.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=204bp
GLGEGFVEACLSVLGWSPQGVIEAILEDRLPPQVASLHRGLRRAWKSKKG
DLDKAYRVDKDLAAAEAKRLIAMENRQEDDAYLLDREYDDDYDDQYDDRE
VDVGGGGRGDDLETVRRVNQLIRQEEEEDAWWESNKNNNLSVPAPKGGGW
RARRDDEHAGEGESSEEYSGGRGRGRGGREGGRSGPSPRGRGRGGDNSSG
GGNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf