prot_P-lacustris_contig93.15716.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig93.15716.1
Unique Nameprot_P-lacustris_contig93.15716.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length97
Homology
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BLAST of mRNA_P-lacustris_contig93.15716.1 vs. uniprot
Match: A0A6H5K7N2_9PHAE (LysM domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N2_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 5.690e-6
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 0 
Query:   14 EEHLPFMVTHTLVKVLQDPLLSVHYQ 39
            EEHLPFMVTHT+VKVL+DPLLS HYQ
Sbjct: 2103 EEHLPFMVTHTMVKVLRDPLLSAHYQ 2128
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig93.15716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7N2_9PHAE5.690e-688.46LysM domain-containing protein (Fragment) n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig93contigP-lacustris_contig93:117011..117521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig93.15716.1mRNA_P-lacustris_contig93.15716.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig93 117011..117522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig93.15716.1 ID=prot_P-lacustris_contig93.15716.1|Name=mRNA_P-lacustris_contig93.15716.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=97bp
CDSPRRRVRSLEEEEHLPFMVTHTLVKVLQDPLLSVHYQSAVQTAVEVCC
GLGFSRLTGVMANADGLASMNMPGVAGDLSAVEGRAGGRRAGGGWGG
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