prot_P-lacustris_contig926.15685.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig926.15685.1
Unique Nameprot_P-lacustris_contig926.15685.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length695
Homology
BLAST of mRNA_P-lacustris_contig926.15685.1 vs. uniprot
Match: A0A6H5JI45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI45_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 3.070e-88
Identity = 305/654 (46.64%), Postives = 335/654 (51.22%), Query Frame = 0
Query:  117 LSSWRNTLLQGKRLLGS---RNRTQGTGATSLPSSHSRQHRRHQ--SATARWSAGPDTLTPSQPSRPDPTQRQEPGTGSISSSSTS-----TRHIAADVLSHPRTVSAESDFSLSDVFAGAVSPAGLAAXXXXXXXXEDL-------------VVFRTGGTARTGGAGGSTARTLTPRARPGGGKLGGRSPSSPIIGRVVAAVXXXXXXXXXXEEAAKLGVEREADEPGGAAWGDSSPPPISAMGEDENEESPPKMQGLSMLGRLSSPQELSPTTPTEG-------------------DAVTALLADTEALSGGKVGTAAGAEVGVVPGIATVSDDRTVPGRLGLTLSSPYEVSPSRAILSPGTDSDPGSTPSPELLVRRSGRLFGGGPPTREGFSPQP--EGAASHAEEEMPGIDARPVSTTSTFRPPPEEALTVSVSPRSAATA--GSSLW---PAASHTIPTSAGWQGADEVPGGLLATRSSKMRALGTLDLMQVVGTFSDSGSSSE---IEETSPRARAASASNFPRPKSPRXXXP-----RLKVLPVVGPGTGRPSSPINTTQQQEQQQAPSP-------------------LPPIQTDPERI-AGVHFHEAASPTPGESPGVESSREYSESDDDDTPGGGMLKGEDLV 693
            +S+WRNT  QG   +GS   R+RTQ  G  S PS  S         SATARWS+                 R  P T              T  I ADVLSHP  VSAESDFSLS+VFAGAVSPAGLAAXXXXXXXX                                                                  XXXXXXXXXX      G ER ADE   AA G S   P  A+G    E S P+MQG SM GRL SPQELSPTTP                          A+ AD   +SGG                    D RTV GRLGLTLSS  EV PSR +LSPGTDSDPGS+PSPE+LVRRS R F GG   +EGF+P P  EGAA+  EEE    +    + T    P P++   V+VSP SA+ +  GS+LW   P A  T   S G QGADE   GLLATRS KMRALGTLDLMQVVGTFSDS S S+   IEETSPRARAA+ASN PRPKS  XXX      RL VLP +G G  RPSSPI T Q Q+                          LPPIQ   E I AGVHF   A P PG SPG++SSREYSESDDDDTPGGGMLKGE LV
Sbjct: 1394 ISAWRNTW-QGLMSVGSSRGRSRTQTGGTASSPSRQSXXXXXXXXXSATARWSS----------------PRDAPATXXXXXXXXXXXXXXTGRIVADVLSHPTIVSAESDFSLSEVFAGAVSPAGLAAXXXXXXXXXXFRFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAERTADEGPPAAAGRSGVQP--AIGTATREVSTPQMQGASMPGRLGSPQELSPTTPXXXXXXXXXXXXXXXXXXXXXVSEAAAMTADPAEVSGG--------------------DGRTVLGRLGLTLSSHNEVFPSRVMLSPGTDSDPGSSPSPEVLVRRSSRPFSGGDAGQEGFAPHPQEEGAAAQKEEETEIGEGAQSAVTHEPTPSPDDVHGVTVSPPSASDSSLGSNLWCSGPFARSTFGKSMGGQGADEARDGLLATRSGKMRALGTLDLMQVVGTFSDSESPSDDIDIEETSPRARAAAASNSPRPKSXXXXXXXXXXXRLSVLPALGSGATRPSSPIITQQPQQXXXXXXXXXXXXXXXXXXXXXXXXXXLPPIQAGLEGIMAGVHFPGEALPRPGYSPGMDSSREYSESDDDDTPGGGMLKGERLV 2008          
BLAST of mRNA_P-lacustris_contig926.15685.1 vs. uniprot
Match: D8LTM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM1_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 9.380e-46
Identity = 164/407 (40.29%), Postives = 188/407 (46.19%), Query Frame = 0
Query:  313 GVEREADEPGGAAWGDSSPPPISAMGEDENEESPPKMQGLSMLGRLSSPQELSPTTPTEG-------------------DAVTALLADTEALSGGKVGTAAGAEVGVVPGIATVSDDRTVPGRLGLTLSSPYEVSPSRAILSPGTDSDPGSTPSPELLVRRSGRLFGGGPPTREGFSPQPEGAASHA--EEEMPGIDARPVSTTSTFRPPPEEALTVSVSPRSAATA--GSSLW---PAASHTIPTSAGWQGADEVPGGLLATRSSKMRALGTLDLMQVVGTFSDSGSSSEIEETSPRARAASASNFPRPKSPRXXXPRLKVLPVVGPGTGRPSSPINTTQQQEQQQAPSPLPPIQTDPERIAGVHFHEAASPTPGESPGVESSREYSESDDDDTPGGGMLKGEDLV 693
            G ER ADE   AA G     P  A+G    E S P+MQG SM GRL SPQELSPTTP                         +A+ AD   +SGG                    D RTV GRLGLTLSS  EV PSR +LSPGTDSDPGS+PSPE+LVRRS R F GG   +E F+P           EEE    +    + T    P P +   V++SP SA+ +  GS+LW   P A  T   S G QGA+E   GLLATRS KMRALGTLDLMQ                                         L+ +                                      +AGVHF   A P PG SPG++SSREYSESDDDDTPGGGMLKGE LV
Sbjct: 1253 GAERTADEGPPAAAGRGGVQP--AIGAATGEVSTPQMQGASMPGRLGSPQELSPTTPPXXXXXXXXXXXXXXXXXXXXVSEASAMTADPAEVSGG--------------------DGRTVLGRLGLTLSSHNEVFPSRVMLSPGTDSDPGSSPSPEVLVRRSSRPFSGGDVGQESFAPPXXXXXXXXXREEEAEIGEGAQSAVTHEPTPSPADVHGVTISPPSASDSSLGSNLWCSGPFARSTFGKSMGGQGAEEARDGLLATRSGKMRALGTLDLMQA---------------------------------------GLEGI--------------------------------------MAGVHFPGEALPRPGYSPGMDSSREYSESDDDDTPGGGMLKGEGLV 1560          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig926.15685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI45_9PHAE3.070e-8846.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTM1_ECTSI9.380e-4640.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig926contigP-lacustris_contig926:8666..11722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig926.15685.1mRNA_P-lacustris_contig926.15685.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig926 8285..33414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig926.15685.1 ID=prot_P-lacustris_contig926.15685.1|Name=mRNA_P-lacustris_contig926.15685.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=695bp
MTGSLSPGPAASPKGVQSSGNNELPDDAAASAWLPARAATSRPSNLPPSS
SQQSALAGGGGGGAETEGGGVAEVGSTASAIATVERRQQQGKEGAGSAAA
EEEVETGNVQRGSGGALSSWRNTLLQGKRLLGSRNRTQGTGATSLPSSHS
RQHRRHQSATARWSAGPDTLTPSQPSRPDPTQRQEPGTGSISSSSTSTRH
IAADVLSHPRTVSAESDFSLSDVFAGAVSPAGLAAAAAAASSREDLVVFR
TGGTARTGGAGGSTARTLTPRARPGGGKLGGRSPSSPIIGRVVAAVAEAA
AETAAEEEAAKLGVEREADEPGGAAWGDSSPPPISAMGEDENEESPPKMQ
GLSMLGRLSSPQELSPTTPTEGDAVTALLADTEALSGGKVGTAAGAEVGV
VPGIATVSDDRTVPGRLGLTLSSPYEVSPSRAILSPGTDSDPGSTPSPEL
LVRRSGRLFGGGPPTREGFSPQPEGAASHAEEEMPGIDARPVSTTSTFRP
PPEEALTVSVSPRSAATAGSSLWPAASHTIPTSAGWQGADEVPGGLLATR
SSKMRALGTLDLMQVVGTFSDSGSSSEIEETSPRARAASASNFPRPKSPR
AKSPRLKVLPVVGPGTGRPSSPINTTQQQEQQQAPSPLPPIQTDPERIAG
VHFHEAASPTPGESPGVESSREYSESDDDDTPGGGMLKGEDLVS*
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