prot_P-lacustris_contig1240.1757.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1240.1757.1
Unique Nameprot_P-lacustris_contig1240.1757.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length182
Homology
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A6H5KM66_9PHAE (RWD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KM66_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 4.470e-93
Identity = 146/179 (81.56%), Postives = 155/179 (86.59%), Query Frame = 0
Query:    1 MSGFETNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDRXXXXXXXXXXXXXXXXXXXXXXXXTIRRRRQIDGTP 179
            MSGFETNHEEEQSMELEALEAIYADLFSIVS+KPLEWK+HLEPTEGGEGEVNHVGIDFTCRIP+RYPDEAPGV VEATKGLTPKQ++EL  +A  +A E+VGMAMG+TIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDR                XXXXXX  TIRRRRQIDGTP
Sbjct:    1 MSGFETNHEEEQSMELEALEAIYADLFSIVSEKPLEWKVHLEPTEGGEGEVNHVGIDFTCRIPDRYPDEAPGVEVEATKGLTPKQIEELQALANTQAEEHVGMAMGYTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDRDRRKVEQVKEAEAKARXXXXXXDETIRRRRQIDGTP 179          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A835YPQ6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPQ6_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.220e-40
Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 0
Query:    6 TNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAE 140
            +N+ E+Q +E+EALEAIY   F+ +   PL+WK+H+ P   GEGE NHVG+D  C I   YPD  P + +   +GL   Q QELL +AQ+ A +NVG+AMG+T+AE+++EWLADNN  SA DGSMH  MLRRM E
Sbjct:    2 SNYTEDQELEVEALEAIYPKEFAKLQDSPLQWKVHVVPFPDGEGE-NHVGVDMVCTIGPSYPDTPPDIDIVIKQGLNEAQAQELLALAQQNAQDNVGIAMGYTLAEAIREWLADNN-QSATDGSMHANMLRRMDE 134          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A7S3YJK7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJK7_HETAK)

HSP 1 Score: 135 bits (339), Expect = 1.320e-35
Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 0
Query:    7 NHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 138
            ++ EEQSME+EALEAIY + ++ ++  PLE+K+ LEP +GG  + NHV ID   + PE YP+ AP + +   +GL   Q+ E++ +    A EN+GMAM FTIAE++KEWL +NNV  A DGSMH  ML+RM
Sbjct:    2 DYAEEQSMEVEALEAIYMEEYTKIADSPLEYKIFLEPIQGGGEDENHVAIDMMVKYPETYPEVAPEITINNRRGLGDHQIPEIMELVNTTAEENIGMAMIFTIAEAVKEWLNENNVKGA-DGSMHTAMLQRM 132          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A7S2SNU7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU7_9STRA)

HSP 1 Score: 128 bits (322), Expect = 5.380e-33
Identity = 71/142 (50.00%), Postives = 89/142 (62.68%), Query Frame = 0
Query:    1 MSGFETNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGD 142
            M+ FE   EE Q+ME EALE+I+   F  VS +P  W++HL P   G+ E NHV I F  ++P  YP+E P +++   KGLT  QV EL  +A   A EN+GMAM +TIAE L+EWL   N P A D SMH  MLRRM E D
Sbjct:    8 MAAFEAEAEE-QAMEAEALESIFMADFEQVSVQPFHWRIHLTPHPPGDDEENHVEIFFEAKVPAAYPNEKPVMSITPEKGLTEGQVLELQELADATAEENLGMAMIYTIAEELREWLLARNEPPA-DNSMHAAMLRRMQEKD 147          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: K0RNJ8_THAOC (RWD domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RNJ8_THAOC)

HSP 1 Score: 116 bits (291), Expect = 8.550e-28
Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 0
Query:    6 TNHEEEQSMELEALEAIYADLFSIVS-KKPLEWKLHLEPTEGG-----EGEVNHVGIDFTCRIPERYPDEA-PGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDR 143
            ++H+EEQ ME EALEAI+ D F + S  +P EW + L P + G     E + NHV ++   +IP  YP+EA P + +E  KGL+     EL+++A +EA  N GM + F + E +KEWL DNNV    D SM+ +M+R+  E +R
Sbjct:  101 SDHQEEQEMEAEALEAIFMDAFEVRSPNQPFEWSVKLVPVDCGGDEEEENKENHVMVNLVAKIPLAYPEEALPELDIEVVKGLSKDNKTELVKLANEEAEANEGMPVVFAVCERIKEWLVDNNVKGLDDASMYAQMMRKAKEKER 245          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A484EBS0_BRELC (RWD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBS0_BRELC)

HSP 1 Score: 111 bits (277), Expect = 8.870e-28
Identity = 56/133 (42.11%), Postives = 89/133 (66.92%), Query Frame = 0
Query:    6 TNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 138
            T+++EEQ+ME+EALEAIY + F+ +S  PL +++H+ P + G+   N VG+     IP+ YPD  P + +   KGL   Q++E+  + +++  EN+GMAM +T++E+ +E+L +NN     DGS H EMLRRM
Sbjct:    2 TDYQEEQAMEVEALEAIYMNDFTKLSDTPLAYQIHIVPNQDGDN--NFVGLLLQAEIPKTYPDSEPKIEIIVKKGLASGQIKEIEELLERQIKENMGMAMIYTLSEAAREYLVENNREDN-DGSEHQEMLRRM 131          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: F0W5M7_9STRA (Uncharacterized protein AlNc14C21G2192 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5M7_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.160e-26
Identity = 55/133 (41.35%), Postives = 86/133 (64.66%), Query Frame = 0
Query:    6 TNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 138
            T+H E+  ME+EALE+IY   F+++  KPL + +H+ P +  +G  NHV +  TC IPE YP++ P + +   KGL+  Q  E+  + Q++   N GM M +TI+E+++E+L +NN  +  DGS + EMLRRM
Sbjct:   40 TDHREDMMMEVEALESIYMQDFTMIKDKPLCYAVHIVPNQ--DGSENHVALTLTCCIPETYPEQEPNLEITTLKGLSDAQRNEIEALLQQQIRGNAGMPMIYTISEAVREYLVENN-RAGHDGSEYQEMLRRM 169          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A3R7H247_9STRA (RWD domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H247_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.800e-24
Identity = 56/133 (42.11%), Postives = 86/133 (64.66%), Query Frame = 0
Query:    6 TNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 138
            T+++EEQSME+EALEAIY D F+ +S  PL +++ + P + G+   N V +     IP  YPD  P + +   KGL+ +Q +E+  +  ++  EN+GMAM +T+ E+++E+L +NN     DGS H EMLRRM
Sbjct:    2 TDYKEEQSMEVEALEAIYMDDFTKLSDDPLSFQVRVVPNQDGKN--NFVAMTLKVDIPATYPDVEPTLEIILNKGLSDRQHKEMKELLTQQIEENMGMAMMYTLCEAVREYLVENN-REGNDGSEHQEMLRRM 131          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A2R5G5A0_9STRA (E3 ubiquitin-protein ligase RNF25 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5A0_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.310e-24
Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 0
Query:    7 NHEEEQSMELEALEAIYADLFSIVSKK-PLEWKLHLEPTEGGEG-EVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDR 143
            +H+EEQ +ELEALEAI+ + +S+  +  P   KL L P  G +  E N VG++    +P  YP+ AP VAV A +GLT KQ  EL  +A  E    +GMAM F ++E +KEWL +NN     D SMH +ML++M + +R
Sbjct:    2 DHDEEQQLELEALEAIFVEDYSLEQESSPRVVKLKLLPFSGEDADEENKVGVEAQFTLPAEYPEVAPEVAVTALRGLTSKQTDELADLALAEVENLLGMAMIFQLSEVIKEWLVENN-RDHTDESMHAQMLQKMQDEER 139          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A7S2W2G4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2G4_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.070e-24
Identity = 55/132 (41.67%), Postives = 82/132 (62.12%), Query Frame = 0
Query:    7 NHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 138
            ++EEEQS+ELEALEAI+ D + ++   P + ++ LEP  G   E +HV +     +P+ YP+  P ++V+  KGL PK  +EL     + A EN+GM M FTI E +K+WL +NN     D SMH +M+ R+
Sbjct:   14 DYEEEQSLELEALEAIFVDDYELLETSPRKVRVTLEPFPGQPDE-SHVAVSVEFVLPKTYPEVVPEISVQPIKGLIPKHCEELKASGDECANENLGMPMIFTITEVIKDWLCENN-RDHTDQSMHAQMMMRI 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KM66_9PHAE4.470e-9381.56RWD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YPQ6_9STRA1.220e-4053.33Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S3YJK7_HETAK1.320e-3550.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2SNU7_9STRA5.380e-3350.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K0RNJ8_THAOC8.550e-2842.07RWD domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A484EBS0_BRELC8.870e-2842.11RWD domain-containing protein n=1 Tax=Bremia lactu... [more]
F0W5M7_9STRA4.160e-2641.35Uncharacterized protein AlNc14C21G2192 n=1 Tax=Alb... [more]
A0A3R7H247_9STRA1.800e-2442.11RWD domain-containing protein n=4 Tax=Phytophthora... [more]
A0A2R5G5A0_9STRA2.310e-2443.88E3 ubiquitin-protein ligase RNF25 n=1 Tax=Hondaea ... [more]
A0A7S2W2G4_9STRA3.070e-2441.67Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..166
IPR006575RWD domainSMARTSM00591RWD2001bcoord: 14..120
e-value: 6.1E-16
score: 69.0
IPR006575RWD domainPFAMPF05773RWDcoord: 10..117
e-value: 1.1E-21
score: 77.3
IPR006575RWD domainPROSITEPS50908RWDcoord: 14..120
score: 20.965
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..129
e-value: 4.3E-33
score: 115.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..123
IPR040213GIR2-likePANTHERPTHR12292RWD DOMAIN-CONTAINING PROTEINcoord: 8..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1240contigP-lacustris_contig1240:17129..25544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1240.1757.1mRNA_P-lacustris_contig1240.1757.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1240 16847..29173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1240.1757.1 ID=prot_P-lacustris_contig1240.1757.1|Name=mRNA_P-lacustris_contig1240.1757.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=182bp
MSGFETNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGE
VNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGEN
VGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDRDRRKEKE
VKEAEAKARAEDDEDEETIRRRRQIDGTPSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006575RWD-domain
IPR016135UBQ-conjugating_enzyme/RWD
IPR040213GIR2-like