mRNA_P-lacustris_contig1240.1757.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1240.1757.1
Unique NamemRNA_P-lacustris_contig1240.1757.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A6H5KM66_9PHAE (RWD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KM66_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 2.360e-87
Identity = 146/179 (81.56%), Postives = 155/179 (86.59%), Query Frame = 1
Query:  283 MSGFETNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDRXXXXXXXXXXXXXXXXXXXXXXXXTIRRRRQIDGTP 819
            MSGFETNHEEEQSMELEALEAIYADLFSIVS+KPLEWK+HLEPTEGGEGEVNHVGIDFTCRIP+RYPDEAPGV VEATKGLTPKQ++EL  +A  +A E+VGMAMG+TIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDR                XXXXXX  TIRRRRQIDGTP
Sbjct:    1 MSGFETNHEEEQSMELEALEAIYADLFSIVSEKPLEWKVHLEPTEGGEGEVNHVGIDFTCRIPDRYPDEAPGVEVEATKGLTPKQIEELQALANTQAEEHVGMAMGYTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDRDRRKVEQVKEAEAKARXXXXXXDETIRRRRQIDGTP 179          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A835YPQ6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPQ6_9STRA)

HSP 1 Score: 148 bits (373), Expect = 7.340e-37
Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 1
Query:  298 TNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAE 702
            +N+ E+Q +E+EALEAIY   F+ +   PL+WK+H+ P   GEGE NHVG+D  C I   YPD  P + +   +GL   Q QELL +AQ+ A +NVG+AMG+T+AE+++EWLADNN  SA DGSMH  MLRRM E
Sbjct:    2 SNYTEDQELEVEALEAIYPKEFAKLQDSPLQWKVHVVPFPDGEGE-NHVGVDMVCTIGPSYPDTPPDIDIVIKQGLNEAQAQELLALAQQNAQDNVGIAMGYTLAEAIREWLADNN-QSATDGSMHANMLRRMDE 134          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A7S3YJK7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJK7_HETAK)

HSP 1 Score: 136 bits (342), Expect = 3.580e-32
Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 1
Query:  301 NHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 696
            ++ EEQSME+EALEAIY + ++ ++  PLE+K+ LEP +GG  + NHV ID   + PE YP+ AP + +   +GL   Q+ E++ +    A EN+GMAM FTIAE++KEWL +NNV  A DGSMH  ML+RM
Sbjct:    2 DYAEEQSMEVEALEAIYMEEYTKIADSPLEYKIFLEPIQGGGEDENHVAIDMMVKYPETYPEVAPEITINNRRGLGDHQIPEIMELVNTTAEENIGMAMIFTIAEAVKEWLNENNVKGA-DGSMHTAMLQRM 132          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A7S2SNU7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU7_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.670e-30
Identity = 71/142 (50.00%), Postives = 89/142 (62.68%), Query Frame = 1
Query:  283 MSGFETNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGD 708
            M+ FE    EEQ+ME EALE+I+   F  VS +P  W++HL P   G+ E NHV I F  ++P  YP+E P +++   KGLT  QV EL  +A   A EN+GMAM +TIAE L+EWL   N P A D SMH  MLRRM E D
Sbjct:    8 MAAFEAE-AEEQAMEAEALESIFMADFEQVSVQPFHWRIHLTPHPPGDDEENHVEIFFEAKVPAAYPNEKPVMSITPEKGLTEGQVLELQELADATAEENLGMAMIYTIAEELREWLLARNEPPA-DNSMHAAMLRRMQEKD 147          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A484EBS0_BRELC (RWD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBS0_BRELC)

HSP 1 Score: 112 bits (280), Expect = 3.430e-25
Identity = 56/133 (42.11%), Postives = 89/133 (66.92%), Query Frame = 1
Query:  298 TNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 696
            T+++EEQ+ME+EALEAIY + F+ +S  PL +++H+ P + G+   N VG+     IP+ YPD  P + +   KGL   Q++E+  + +++  EN+GMAM +T++E+ +E+L +NN     DGS H EMLRRM
Sbjct:    2 TDYQEEQAMEVEALEAIYMNDFTKLSDTPLAYQIHIVPNQDGDN--NFVGLLLQAEIPKTYPDSEPKIEIIVKKGLASGQIKEIEELLERQIKENMGMAMIYTLSEAAREYLVENNREDN-DGSEHQEMLRRM 131          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: K0RNJ8_THAOC (RWD domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RNJ8_THAOC)

HSP 1 Score: 117 bits (294), Expect = 6.180e-25
Identity = 61/145 (42.07%), Postives = 89/145 (61.38%), Query Frame = 1
Query:  298 TNHEEEQSMELEALEAIYADLFSIVS-KKPLEWKLHLEPTEGG-----EGEVNHVGIDFTCRIPERYPDEA-PGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDR 711
            ++H+EEQ ME EALEAI+ D F + S  +P EW + L P + G     E + NHV ++   +IP  YP+EA P + +E  KGL+     EL+++A +EA  N GM + F + E +KEWL DNNV    D SM+ +M+R+  E +R
Sbjct:  101 SDHQEEQEMEAEALEAIFMDAFEVRSPNQPFEWSVKLVPVDCGGDEEEENKENHVMVNLVAKIPLAYPEEALPELDIEVVKGLSKDNKTELVKLANEEAEANEGMPVVFAVCERIKEWLVDNNVKGLDDASMYAQMMRKAKEKER 245          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: F0W5M7_9STRA (Uncharacterized protein AlNc14C21G2192 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5M7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.590e-23
Identity = 55/133 (41.35%), Postives = 86/133 (64.66%), Query Frame = 1
Query:  298 TNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 696
            T+H E+  ME+EALE+IY   F+++  KPL + +H+ P +  +G  NHV +  TC IPE YP++ P + +   KGL+  Q  E+  + Q++   N GM M +TI+E+++E+L +NN  +  DGS + EMLRRM
Sbjct:   40 TDHREDMMMEVEALESIYMQDFTMIKDKPLCYAVHIVPNQ--DGSENHVALTLTCCIPETYPEQEPNLEITTLKGLSDAQRNEIEALLQQQIRGNAGMPMIYTISEAVREYLVENN-RAGHDGSEYQEMLRRM 169          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A3R7H247_9STRA (RWD domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H247_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.170e-22
Identity = 56/133 (42.11%), Postives = 86/133 (64.66%), Query Frame = 1
Query:  298 TNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 696
            T+++EEQSME+EALEAIY D F+ +S  PL +++ + P + G+   N V +     IP  YPD  P + +   KGL+ +Q +E+  +  ++  EN+GMAM +T+ E+++E+L +NN     DGS H EMLRRM
Sbjct:    2 TDYKEEQSMEVEALEAIYMDDFTKLSDDPLSFQVRVVPNQDGKN--NFVAMTLKVDIPATYPDVEPTLEIILNKGLSDRQHKEMKELLTQQIEENMGMAMMYTLCEAVREYLVENN-REGNDGSEHQEMLRRM 131          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A2R5G5A0_9STRA (E3 ubiquitin-protein ligase RNF25 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5A0_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.320e-22
Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 1
Query:  301 NHEEEQSMELEALEAIYADLFSIVSKK-PLEWKLHLEPTEGGEG-EVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDR 711
            +H+EEQ +ELEALEAI+ + +S+  +  P   KL L P  G +  E N VG++    +P  YP+ AP VAV A +GLT KQ  EL  +A  E    +GMAM F ++E +KEWL +NN     D SMH +ML++M + +R
Sbjct:    2 DHDEEQQLELEALEAIFVEDYSLEQESSPRVVKLKLLPFSGEDADEENKVGVEAQFTLPAEYPEVAPEVAVTALRGLTSKQTDELADLALAEVENLLGMAMIFQLSEVIKEWLVENN-RDHTDESMHAQMLQKMQDEER 139          
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Match: A0A7S2W2G4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2G4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 7.670e-22
Identity = 55/132 (41.67%), Postives = 82/132 (62.12%), Query Frame = 1
Query:  301 NHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGEVNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGENVGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRM 696
            ++EEEQS+ELEALEAI+ D + ++   P + ++ LEP  G   E +HV +     +P+ YP+  P ++V+  KGL PK  +EL     + A EN+GM M FTI E +K+WL +NN     D SMH +M+ R+
Sbjct:   14 DYEEEQSLELEALEAIFVDDYELLETSPRKVRVTLEPFPGQPDE-SHVAVSVEFVLPKTYPEVVPEISVQPIKGLIPKHCEELKASGDECANENLGMPMIFTITEVIKDWLCENN-RDHTDQSMHAQMMMRI 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1240.1757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KM66_9PHAE2.360e-8781.56RWD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YPQ6_9STRA7.340e-3753.33Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S3YJK7_HETAK3.580e-3250.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2SNU7_9STRA6.670e-3050.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A484EBS0_BRELC3.430e-2542.11RWD domain-containing protein n=1 Tax=Bremia lactu... [more]
K0RNJ8_THAOC6.180e-2542.07RWD domain-containing protein (Fragment) n=1 Tax=T... [more]
F0W5M7_9STRA1.590e-2341.35Uncharacterized protein AlNc14C21G2192 n=1 Tax=Alb... [more]
A0A3R7H247_9STRA4.170e-2242.11RWD domain-containing protein n=4 Tax=Phytophthora... [more]
A0A2R5G5A0_9STRA6.320e-2243.88E3 ubiquitin-protein ligase RNF25 n=1 Tax=Hondaea ... [more]
A0A7S2W2G4_9STRA7.670e-2241.67Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1240contigP-lacustris_contig1240:16847..29173 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.0
Seed ortholog evalue6.3e-75
Seed eggNOG ortholog2880.D7FTA4
Preferred nameRWDD4
KEGG koko:K20032
KEGG TC9.B.37.1,9.B.37.3
Hectar predicted targeting categoryother localisation
GOsGO:0002181,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005844,GO:0006355,GO:0006357,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010469,GO:0010556,GO:0010646,GO:0010647,GO:0014070,GO:0019219,GO:0019222,GO:0019538,GO:0023051,GO:0023052,GO:0023056,GO:0030518,GO:0030521,GO:0030522,GO:0031323,GO:0031326,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032502,GO:0032870,GO:0032991,GO:0033143,GO:0033145,GO:0033554,GO:0033574,GO:0033993,GO:0034599,GO:0034641,GO:0034645,GO:0042221,GO:0043043,GO:0043170,GO:0043401,GO:0043603,GO:0043604,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0048518,GO:0048522,GO:0048545,GO:0048583,GO:0048584,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0060765,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071383,GO:0071394,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:1901564,GO:1901566,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1903506,GO:1903832,GO:1903833,GO:1990904,GO:2000112,GO:2000273,GO:2000823,GO:2000825,GO:2001141
EggNOG free text desc.positive regulation of androgen receptor activity
EggNOG OGsKOG4018@1,KOG4018@2759
EC2.3.1.225
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04131
Exons8
Model size1895
Cds size546
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1240.1757.1prot_P-lacustris_contig1240.1757.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1240 17129..25544 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815557.6775465-UTR-P-lacustris_contig1240:16846..171281622815557.6775465-UTR-P-lacustris_contig1240:16846..17128Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1240 16847..17128 +
1693493611.110355-UTR-P-lacustris_contig1240:16846..171281693493611.110355-UTR-P-lacustris_contig1240:16846..17128Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1240 16847..17128 +
1622815557.752185-UTR-P-lacustris_contig1240:25544..255641622815557.752185-UTR-P-lacustris_contig1240:25544..25564Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1240 25545..25564 +
1693493611.186706-UTR-P-lacustris_contig1240:25544..255641693493611.186706-UTR-P-lacustris_contig1240:25544..25564Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1240 25545..25564 +
1622815557.7618678-UTR-P-lacustris_contig1240:26963..270961622815557.7618678-UTR-P-lacustris_contig1240:26963..27096Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1240 26964..27096 +
1693493611.1980863-UTR-P-lacustris_contig1240:26963..270961693493611.1980863-UTR-P-lacustris_contig1240:26963..27096Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1240 26964..27096 +
1622815557.7714872-UTR-P-lacustris_contig1240:28259..291731622815557.7714872-UTR-P-lacustris_contig1240:28259..29173Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1240 28260..29173 +
1693493611.207578-UTR-P-lacustris_contig1240:28259..291731693493611.207578-UTR-P-lacustris_contig1240:28259..29173Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1240 28260..29173 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815557.6916127-CDS-P-lacustris_contig1240:17128..171441622815557.6916127-CDS-P-lacustris_contig1240:17128..17144Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 17129..17144 +
1693493611.1249025-CDS-P-lacustris_contig1240:17128..171441693493611.1249025-CDS-P-lacustris_contig1240:17128..17144Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 17129..17144 +
1622815557.7015722-CDS-P-lacustris_contig1240:20215..203591622815557.7015722-CDS-P-lacustris_contig1240:20215..20359Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 20216..20359 +
1693493611.133712-CDS-P-lacustris_contig1240:20215..203591693493611.133712-CDS-P-lacustris_contig1240:20215..20359Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 20216..20359 +
1622815557.7117474-CDS-P-lacustris_contig1240:20948..210761622815557.7117474-CDS-P-lacustris_contig1240:20948..21076Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 20949..21076 +
1693493611.1415696-CDS-P-lacustris_contig1240:20948..210761693493611.1415696-CDS-P-lacustris_contig1240:20948..21076Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 20949..21076 +
1622815557.7218087-CDS-P-lacustris_contig1240:23851..239461622815557.7218087-CDS-P-lacustris_contig1240:23851..23946Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 23852..23946 +
1693493611.149565-CDS-P-lacustris_contig1240:23851..239461693493611.149565-CDS-P-lacustris_contig1240:23851..23946Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 23852..23946 +
1622815557.7324517-CDS-P-lacustris_contig1240:24854..249421622815557.7324517-CDS-P-lacustris_contig1240:24854..24942Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 24855..24942 +
1693493611.1581433-CDS-P-lacustris_contig1240:24854..249421693493611.1581433-CDS-P-lacustris_contig1240:24854..24942Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 24855..24942 +
1622815557.7424712-CDS-P-lacustris_contig1240:25469..255441622815557.7424712-CDS-P-lacustris_contig1240:25469..25544Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 25470..25544 +
1693493611.1720188-CDS-P-lacustris_contig1240:25469..255441693493611.1720188-CDS-P-lacustris_contig1240:25469..25544Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1240 25470..25544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1240.1757.1

>prot_P-lacustris_contig1240.1757.1 ID=prot_P-lacustris_contig1240.1757.1|Name=mRNA_P-lacustris_contig1240.1757.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=182bp
MSGFETNHEEEQSMELEALEAIYADLFSIVSKKPLEWKLHLEPTEGGEGE
VNHVGIDFTCRIPERYPDEAPGVAVEATKGLTPKQVQELLRVAQKEAGEN
VGMAMGFTIAESLKEWLADNNVPSAVDGSMHGEMLRRMAEGDRDRRKEKE
VKEAEAKARAEDDEDEETIRRRRQIDGTPSP*
back to top

mRNA from alignment at P-lacustris_contig1240:16847..29173+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1240.1757.1 ID=mRNA_P-lacustris_contig1240.1757.1|Name=mRNA_P-lacustris_contig1240.1757.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=12327bp|location=Sequence derived from alignment at P-lacustris_contig1240:16847..29173+ (Pleurocladia lacustris SAG_25_93)
CACAGCAGAGCAGTGGCGACTACAGCAGTTCAGCAGTGGACGGGTCAGTT CCTGACTCTCGGCTGCTGCTGTCGCGAAAACGCTGCCAGCAAAGCTTCTA TTCTTGGTTGGTTCGGAACTCGCGAACACCCCATAGAAGCGAAAGGAAGC TGGCCGACGGACTACTGCGGCTATATCACAGCCGAGGAGAACACCCCGCT TTCAGGGAAGTAGAACTTCACCTCGTTGCGTCGGGCATTGCAAACAGGAG CTCCAGCTTGCTGCACAACCGCCGCCGCAGCCATGAGTGGGTTCGAAAGT GAGCTACTTCCTGTTCACGCACACAGGAGTCCTTCTGTATTTGATATTTT GACGGGTGGTGTCGTGTCGGAGGATGAACTGCGCTCCCTTTTACATTGTC CTCTGCTGTAGATCAATTCAGCTTGTGGACACACATGTGGATTACGGATG GTATTCAGCACTTGTGGCTTTCCTGAATGGCAAGGGTTAGCTCAATCCCA TATATCTGTGTGGCGGATGCCTCATGCTGCGGTGTGCGCATATCGATGTT TGCTTAGGCCAGCACTAAATTATGCATCACACAAATGTTGCGCAATATTT TGGCACACACTCAGGATATGCATGCGCCAAATAGAGCATTGGTAGGTCAA CTCGCAGTAAGTTGATGGAGGGGGCCGCTAACACGGGCCCCGAAAAGCCG CATGCAATTTCACGTGTAATGTATCATACACGCGCTCTTTATCCGTTTTT GTTGGAAGGTGGGGTGGTTGAAAACATCAAGAAAAACTGGCTCTCTGCAG GCTCGAGAGGTTAATGTTTGATTTTTCACGTTGTCACCGGCACCAGGCAC ACGGAGTTTTGTACCGAGGTTGCGTGAGATACAACACCGTTGTGATAAAA TTTCGGGACCGAACACGTTATCGCACCGTTATGGTCCTGATGTGTTGGGG GGGTGATATGTCGTGTCACCGGTGTTGCTTGATTTGGTCGGGGTGGAAAA AGTTGCACATGTGGGTATTCTACATGCGGTAGGAGGGGGTGTGGTATCTC ATGAAAGTTGTGGTATCTCGTGCAACCTGCGGCAGGCGAGCGGCGGAGAC CCTCGACAGCAGCGAAGACAAGCGTGGGCACCACACACACCACACTACTG TATTGCCTGTCTTCATCACAATCACACCCGACGCCTACGTGCAGAATGGG ATCCTGACATCCTGACGCTGACAGCAGGAATTATGTCTGCTGCTGCCGTC TCTGTTTTCTAGCCCCTCATCTTCTCTCCCCACAAGCTTCTCTCACATTA ACGTTATTGATATTCGGACGTGTGGTGACGATGGGATTGAATTGCTGCTC TGCCGTGTTGCACTCGCCCCTGCCACATACCGGTGTGCCTTCTGAAATAT TTCACCGACCTGATAGAGGTCACCCGACCTCATGATAGCATAGCCAAGGC CGTACTCTTTCAATGCGTGTGCGAAGTCTGTGCCAAGCGATGATCGCGGC GTCATGTTGGCAAGGGGCCCTACCCACCGTATTTCCACACAAGATAACAC GCCCCTGGTGAACTCATCTGGTGTTCAAAAGATTGTCACTGGGTGTGGTG TTCCGTAAGGGGGCGTGGTATATTCTGTGGCGCCGGTGATGCTATTAAGC TCCTGCGGGAGCCATGGTAGGGGTTGTGATAACCGGGGTGTGTGATAATG AGGGGGTGACGACAAAGGAGTGATACCACCTGAAAGGACCTTGAACCCAT GCATCATTGCATCACGTGCAGCTCGCCGAACCCGGGTACGGATGACAACC CGCTACCACCTGGCTTACCACCTGGCGCGCACCAGAGAGGGAAGGACAAC GATTTATTTATTTTCAAGATTTTTAAAGAAGACTACTCAGCCTTAGCCCA GCATGCTCTCGAACGAGTCCAAAATGAGTCCAAGTAGCACACGCAAGACA CAAGACGAGACGCATCCGGCGAGAAAAATTAAGAATTTCGTTCCGTGGAG GAGATAAAAGCATGATATTCTGTCGAGCCAGAAGCGATCGCCGCGGTCAA GGAGCTGTGTAGGATGCTGCAGCACCAGGGTGTTTTTTTTTCTCCCTGCG CGATAAGGGTCATGCCTCATGCCTTATCGTTGATGTGATGGTCGATAAGG GTCATTCATGCCTTATCGTTGATGTGATGGTCGATAAGGGTCATGCCTTA TCGTTGATGTGATGGTCGCAGTACGGCGTGACTCCCCCGCATACGGAAGG ATGCGTTGCGAGTGTTCTCTGTTCGAGTTCGGGTAGCATGGTTTTTCTCA AGGATAGATAATACCTCGGTTTGAGCCCAGTATCTACCGGTAATTGCCGC AAATTTACCGCAAAATACGGGGACGAAATTATTCCGTCCCGGGGATGAAA AACTCCCGTCCCCGGGAGTTCCACCTTTTTTTTTTGTTTGACGTATTTCG TTTGTGGTCTATCGTGTTTCTCTGCTGTCTGTGGCGCTGTGTCTCTGTCT CGCTTGAAATGGAGGCCCGGGCGGTTCGTTTCTTGTAGCTTGAAGCATGG AGCGAAGACTGCAGTGTGCCCGCTTCCTTCCCGAAAGTACGAAAAACGAA AAACAGACCAACCCAGACAGAAAACAACTCTATTCTCTACCTTGGTCAAC GAGCACGTCTAGTCTGTATCATGCTTTCGAAAATAAAAAAAATAGAAGAA CTGAAAAGATGAAAGATGTGACCGAGGTTTCTTGTGAAACGATCAATCAA TACGAAAACTCTCAACCTCTTTTTTAAGGCTCAAAGCTCAACATGGCCAT CGTCATACGTGCTAGAGACGGGCCCCCTCGTGAACCGGAAAAGTACCGCA AAAAAACAAGTACCTACCCGGTGAGCTTGGTACCGGTAATTACCGGCAGC GGGGTACTACCGATTCTGGTTTTTCTGGTGGTAAATTGAAGGGGGCGTAG AGCGTTTCAAAATGCTCTCCGTGAAGAGCCGTGCTAGAAACCGGGGGTTA GAACTAGAACAGCACGCTCCTCTAGTTTGGACACCACAGGCGATGGCACG CCACTACACGCCTGTTCATCTGTTGACCTCGTTCTGGCCGTCGGTTTACG CGATTGGGCGTAGCAGTCTTCGCTGAACTCGTCTTTAGTACTCGCACGCT CAAAGAGACGATACTTTTGAATGCTGGCACTGTTGCTGTTGGGCCTGCCG CTGCTGCTCCTACGCACAGCACAACCATCGTCGTTGCTGCTAATACTAGT GCCGTCCGCCGCACGGGCACCTCTGTGCTGCGGTCATGCTACGGGCCCTT GATGACGCCGTCGCTTGCGCTCACATTGGCGCTGATTGCCTGCCGCTGCA CTTTGTCCCCATAACCCAGCCAACCACGAGGAAGAGCAGTCGATGGAGCT AGAGGCCCTGGAGGCGATCTACGCCGACTTGTTCAGCATCGTCAGCAAGA AGCCGCTAGAATGGAAATTGCACCTCGAACCAACCGAGGGCGGCGAGGGA GAGGTTAACCACGGTGAGGAAAAACACGTGACCCTTTTGGGGGCGATGTC GAGATGGACATTTTTCCTTGAGCGATCCACGGCAGAGCACGCACAGTAGC CGGTTAAACCATCGCTAGGCTGCGATTGGTCGCTTTTTTGTAGGCACTGA TTGGTCGCTTTTTGTGAGCTCTGATTGGTCGCTTTTGGCGGGCTCTGATT GGTCGCCTCCTAGCGAGCCCTGCTTGGTCGATGAGAGGTGAACGGAAGGT GAGAGGTGAACGGAAGGTGAGAGATTGATCGATCGCTTCGTCGCTTCTGA GGGTCCAAATCGACGCCACTACGAGGGTACCTAGATGTATACCTTGTGAG ATCTTCAGGGGTACGCCGAAAAGTTGGGGTAGTACGTAGGGCTGGTCAGG GGCACTGAAGAAATTCCCATCGTGTACATCCTCTTGCTTGTGGGCTCCTA AACCGCCCCGCAATTCTCTTTTCGCTATCCTCTTTTGTCCAACGGCATTT GGGGTACACTTTTTCCCCTTCGGGGAGAGGGTGGGGGGTACCATTTTATG CTTTAACGACAATGTACTCCTTCTTTGTTCTCGTGTGTTATTTGTTCCTC AGTTGGGATAGACTTTACCTGCCGGATCCCCGAGAGATATCCCGACGAGG CGCCAGGAGTCGCCGTCGAGGCAACTAAGGGCCTGACACCCAAGCAGGTC CAGGAACTCCTGCGGGTGGCGCAAAAAGAGGTATCTATGTATGCATGCAA GTGCCAAGGAGCGTTTCGACAGCACAGCCCGTGGCGCCTGCTTTCTGCCG GCACCACTCACTTCTATTCTATTCTGTTCGATTTGATGTGTTCATCCGCA AGTGAAGTGAAGTGAAGCGAAGGTGCGACATGAAAGCCACATCACGAGAA AAGGAATATGATTGTGTTCTGTGTATCCCGTTCAAAAATGAAAAGAGGGG GGGTGAGGTCGTCTATTACACGGAGGGTTGTCGGGAAAAAAGCAAAGAAC AAGGGGGTCAGCAGCTTTTCTCGGAAGCAAATGTTCGGGACATGGTGAGG AACCATCGCACGGTTCTGTGCATATGCTTATATATGTTCCATATTGTGTT CCGTATTTTCGAGTCGGGAATGGAGGAAAGCACCTGCCCTAACCCTAACT CTAACCCAGCTCTCCAGCTCCCGCTTTCAGAACGCTTGTTCACTCGACGC TTTGGGCTAGGGTTTGGGATATTTAGGGTTAGGCTCGTGTGCGGTCAAAA GAAGGTACACCAAGCTCCCCTTTTTTCTTTTTCGCACGCGTGTTGCTGAG GTTGTTCCGTGGTTGACCTCACGCTATATCCACGCGTGACTGTGTATGGC GACGACCAGCCGGCTGCCTCTCTCTGACATGCGGTTGGGCTCCTCTCACA GGAAGCGAGCGCAGCATGAGATAACCTATATCAAAGAAGAGCAGAGTAGG CAAAGAGGAGGGGGTGTCGACTTGCAAGCATTTGAAGACTTGAAGGCAGA GGCTCAAGCCTAACTGATCACGCGCAACGAGACTACGTCGTGGAAGGGTT TGGCAGGATGAAATTGCGGCCGATCGGCATGACGGCCTCTCCCTGTGAAA TTCCTCCAAGTCTCCGGAGGAAAGAGTTTGCTGACGTGGCACACATACAG CAGTAGTCACCGATCGAAAGCACTATTTCCGTTGGAGTTTGCAGACTAGA AAACAATTGAGCAAAAAAATGATCAAAACTATCTATTTCGGTTGATGTTT GCAGGGAAAAAGATGAAAAGTTTCAACAACGAGATGAAATGTCGGCGAGC AAGAGCACGCTTCCGTTCGCGAGTCGCCGGACGTTTGCTCCCAAAGAGGG CTAACGCACCCTCAACCCTAACCCTAACCCTAAACCCTAACCCTAGCCCG TCGTTTCGGCGTACGAACTGCGGGTATGGGTGTGGCCTCGCGGCACCGGC AGCCTTTTGTGACGAAGGCCAGCCTAGCGCCTCTCCCTGACACGCGTTTT GGAATGTTCTCACATAAAGAACGCCCGAGTACAAGTAGGGGACAAAGGGA CAAAATCCCGGCTGTGGCACAATAAAATAGTTGTTCTGAGATTTCGTTTT GGTAACGTTCGTTCGTTCGCGGCTCGTGTTTAATTAAGGTGCTGAGAATG GAGCGGCTTTCCTTCGTTTTGCCACGCCTGCTGAGACCAACGTATGAAGC AGCTCACGGCTTAAGGCGCTGTTTGTTGCTTTAGCGATTGGTTCCGGGGT AGGCTTGAGCCGCTTTTATTGCGTCAGGCGGCATCTTTATTTTCGGCCTA TCTATTTTGGAATCTAACCCACAAATGTTTCGGTGATTGATGTAGGAGAG CCTCTGCCAAGCATGAGCACTAGGTGGCATCGGATTCGACCCCCTTGCTC GCTGTTTTCATCGCATCTGATGGGACCCCCCTCCCCACAACCATCGTCTC ATTGGATGTGACGCCCCTCGCCGCAATTATCATGCCATCGCGAGGAATTA GTTTTGACAAATGAAATCCTCGGTTAGCAGAGTCCTGCAAGAATAGCGAT GTTGGAATATTCTCGGAACTTTCTCCGTCCGTCACGCTTGACGTGCAGCA GATGTTCTGCTGTGAAGTAACGGTGAGTACGCGGGCACCAATGGGGTGGA TTGCCAGAATAGTCTGTGGTATTTTTTTGTTGAGAAGCAGCGGCGAGGGG AGCGAGCCGATCGCTGCTTCGAATTCCTACCGACATCGCGAGACGCTGTT TGCGCGCGTGAAAACGAAAGATAAAGTCTGCGAAAATTCCGCCCCAAAAT CTCCCCCCGGAAGGCAATTCAAGTTTTTGCTGCACGTCTCTGTAGCGAGA AGTAGACCCACAATTTCGATTCACAACCGAACGACCTCAGCAGCACCGAT CGTCGCTGCCAGGAGCTTGTTGCTGCTCGTTTGGTGGGAGCCCATGCAAG CGACGTTGCCAAACGCGTGAATTCAAACGGGTCACCGCAGAGTGCAGAGG TCTATCCTGAGGTGGGACGACACACATACATCTCCTACCTCACCCCGTTG CCCCCAAGCGGTTCCGCTGCATTGCTGCTCACAGAAACACTGACTCTGCA CTCTCTGGTTTGTTTGGAGATACCGTACCTCATCGGGCTGCAGCAGTACA TTCTCTGCTCTAGCTCTGGACGCTTCTGAGGAGCGCATCGTCCCTTCCTA CACACGGGAAGAATCTAATGTATTTTGTAATGTAAATTATGGATGCTACG CCTCCATGATAGCTGGTATTCACATGTTCCGTTTTTTCTTTTCCATAGAC CGGAGCTTTTTTTTCGGGGGATAAAACAACCACAAACGACTGCCGTGCTT CTCTGTCCCTCTCGATGTCTTTTCTCGGGAGCTCGTTTTTTGTTTTTTTG CTTCGGACCTTTGTTTTTGTTTCTCCTTTCCATTCTCCTCTCCCGTTCTT GTTTTTTGTTTCACGCCGGCCTTGGTGCACGCGTGAATGTCTGTCCACCC GCCAGGCTGGGGAGAACGTAGGCATGGCGATGGGCTTCACAATCGCCGAG AGCTTGAAGGAGTGGCTCGCCGACAACAACGTCCCCTCTGCGGTGGACGG GTGAGCTAAGCTAAAACGTTGTACCGCTGGTTGCGGAAGATAGATACCAC ACCGGTGTGATAACATCAACATTCTGGGACCGAAAACGCCACCACAGGGT GTGGTAATATGTTTAGTGAAGGTGTGTGATATATCATGTCATTGGTGTTT CGGGATGGAAAAAAGTAACATTAACACCGGTGTGGCATTTTGTAAATGTG TGCTATGTCAACACAACGCCCGTTGTCCTTTACACCTCACCTTGCGAACC CGAACCGTATAACCTTAACTTTACCCCGAGCGCCGAGCTCGACGGGAGCA TTTGGCTCGCGGACAACAGCGTCCGAACAGCGTCCCGCGTACGGTATTTG GCTTGCACCTTTACTTCATTTATTTTCAACCATAGACGCCCGGTGTACTT TGTAGTTGGTCTTGGGTCGACGGGCGTTTCGTTCGTGCTTTATTTTCGTT CAATTAGTACAATAGCCCTTTAGCCCTTTAGCCTTTTATCACACTTTGAT TGCGGAGGATGGCAAAGGAAACACCGTGTGTGTTCTTTTTCTCCGTCCTC TACTTTTCACCATTTTTTAATTCTTCTCGATATTAGTTCGAAATATTTCT CCGTCAATCTCACTTGCCCTGTTTTGCGGTGGTTGATTTTGATTGTTTTG CTACTGTAGGTTGCTTTTTTTTGTTTCTCTTGTGACGGATTCGCGGAAAC CGAAGCCCTCCCCCCTTGAACAAAAAAAATAATAACCACTAGTACGGGAA TGTTGGTTGAGAAGACGCTACGCCCGAACTTTTGTCCCTCTTACTCAGTA TCGTTGATCTATTCGGTGTTACAGTACCCTGATCGTGTTTGTATTTGGAT TTCAATGTTGTTCTTTCCTTTTTTGGATTTCAATGTTGTTCTTTCCTTTT TTGAGTAGGTCGATGCACGGCGAGATGCTTCGGAGGATGGCGGAGGGGGA CAGGGATAGGCGAAAGGAGAAAGAAGTCAAGGAGGCCGAGGCAAAGGTGC GGCTGTCATGTTGCTGTTATTGTCGTTGTTGTTGACGTGTTTTTCATGTT TATTGTTTTCTTTAGTTGTTTTATGTTGTTGTTTTATGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTATTTGTTGTTGCTGTTGCCTGTTG TCTCATCTTTTGTGGACCTTACCCTACACATAGAGTACACCTTTCGGTGA TTTGAGGTACAATACTGTAAGCGCGCGCCCCAGCCGGGGTCACGTTCCTA GGGTTACTGCTGTAAAGGTCTACTGTGTTGTTGATGGTTGTTTATTCTCT TCTTTTTTTTCTACGGTGGCAGACACGCTTCATTTGTTGTTGCTGCTGCT GTTGCTGATGATATCTTTGCTCTGTCCTTTATTCTGATTGCATGATCCTT TTATTGTTTACTACAGCAGCATATTCTTCTATTGTTGCTGCTGTTGTTGC CGATGTTTGTTTGTTCTGATGTTTGTTCCGATTGTGTTTTGGCGTGTTTC TATTGACCGGCTTCGTTATCCAGGCACGCGCGGAGGACGACGAAGACGAA GAAACCATCCGAAGGAGAAGACAGATCGACGGAACCCCGTCACCGTAGAA TCTTTCAAGTTGTGGAAGGTATGCATACGACGGCACCCCCGTCACCGTAG AGTCTTTCAAGTTGTGGAAGGTTTGCATACGCGTGAAAATGCTGGCGGTC GTTCTTGGTGTTGCCGCCGCCGCCGCCGTCGTTGTTGTTGTTTGGTTGTT GGTGGGGTAGCAAGTCCTGCCACCGGTGGTGGCGCAACATTTTTTCGTAT TTTTCGACAGACATGCTCCAAGACATATTTGCTTGTGTGCCGAACACGCC CGAATGTGGCGGCCATCACATTCCTAGATGAACGATATTTTGAACGATTT TTCGACGCCTTTTGCCCTTGTGGTTTTGAAAAGACGAAAACTGGTAGAAA CATGTTGTAGGGTAGGGTCGAGCTCGAATTTCCGCCGGCCAGGTAGATCC GGACGAGGGAGCCGTTGAGAAGCAGATGGACAAGAATAACGTAGCAATTT GTACCTCATACAAAACGCCGATTGATCGCACCCCCTAGACGGTCTGCCAA AAAAGATACCGCATACCACATAAGATACGTGAACCGAAATGATTCCGTAT ACCACATAGATCCCGTGAAATAGCGAGTGATCGCACCCGCCCTAGCCCGA AATTGAAAGGTCGGTGTGACGAGATTGCTGCACGACCAAGATGGTGTGAT TGCTGCACGACCAAGATGGTGCCAATGACTATTGTAGCGAAGGTGTTGGT GCTCTTGGAAACTTATTGGAAATTTATTGGAATGATCTCGTCGAGGGTTT TCTTTTTTTCTCAGCCTCAGTTGAGATTTGAAGGTCGATTTAGTGGGGAT GCGATCACTCGCCGCTCTGCGGCATCTCCTGTGTTATGCGGTATATTGTG TTGCATACGTTTCATTATGTGGTGTGAGGTATCTTGTGTGGTATACGGTA TATAATGCGGTATACAGTATCTTGTGTGGTGTACGGCCTAGGGCGGGTTC GATATCACTCGCCATTTGGCGGTAAGTTGAGTTGCTCCGGCGATGTTCCG CACTTATTATATGGGACTACTGGGAGTGGGCTCCGGGAGGCGTTTCGGTA AAGCGGCTGCATCCACGTGGAACCTCTCTGGCACCGTTTCGGGCCAGGGA AAGGGGATTCGCTTCCGCGCCAGGATAACTTACATTAGATATTATCAGAT GAGATACCCTATGTTTTTGCGACCCCCGATTCCCGGGCTGCCCGGCCTCC CTCCCGTATTGGAAGGTTCGTGCGGATTCCATAGCGGCGTACGTACGGAA TCGCTGTTTGGAATAACCTGCTGTGCTTTGGTCGAATCGTCACGTCACCA ATCACACGCCGTGCCATACCATACTATTCTCGCGAGAGATTTGACCTGGT TTGTATGTAGCAGCGCTCCAACCTGGGTTTTCCGTATTACGCGTTGGCGG TTTTCTACGAAATCCAGGTGGCGTTTGAGTTGGAGGCGAGGGCAGGCAAG GCGGTCGACGAAGACTTGGCGTCCAAGAAGCCCACTGGGAAGGAGATGTT CTTGCAACGTCTGGCAATGGAGGAAGCGGAGGGTGTGGAAGGAGAGGAGG GTGAGTTATTTTTGTTGTTGTTGTTGTTGTTGTTGTTTGCTGTTGTTGTT GTCATACCTGGTGGAGCACGGGGGAGGGGATGGAAGAGGTGGCCGGTGAG TTGTTATCGCGTTGTTGCCTCTGTTGCCCAACACCTCCTCGACCCCTCCA TAGCTTCCCTCCCCTCCTAGACGACAGCGAATGAGTTTCCGTTATCGCAG GCTAAGCTTAAGCTTAAACCAAACTGCCTCTCCTTGTGTGTGTTGGCGTC CCATCTGTTCTGGACGCTAGCCAGCACACCATACGGCGAGGATGTAGGCG GGCGCATCAGCCGGAGTTCACAGAACTTTTTTTGTACCTTTTATTGTCCA ACTTCCTTCGGTGTGCTTGCCTTGATTTTCGTGGCGAGAAGGAGCCCAGC CGTCCCTTTCCCTCGTCGACGGTTAGACCGAATTTGTGTACTCACTGACT AAATCCGATTTCCACTGCAAGGCACGCTGTGAGAAAAAATCCCCAGTTCG TACGACTTCGCCAAGGATCGAACGCACGACCTAGCCCGTCAGGGACATAC GAGGTTTACCATAGCCACCGGGGTGACCAGCCCTGCTAGACGAGAACGGA CGACTCTCCGTGGTCCCCAAACCTATATGGCCGAAACGAAGGCAAAACTG AATGCAGCTTTCTCACCTTTCCACAAACAACAGTAACAAAAACTCAAAAA TATGTGAGGGTTGGTTGTAGAATATGAAGGAAATGGGCGAAGCACACGTC GCTCAGCGGGAGAGTTGCGCAGGAAGCTACCCCCTCTCTTGGAATTGGGT CGCGTCTCCAAGCTGGATTTTTCGGTAGGTCCGAACTCCATCCCATCCCA TCCAAACTGGCGGGAAGGAGTTGCTCAATAATTCTTCTGTTCAAAGTAAA GGGAGGCGTGCGAGATGGTTGGGGGCTCCGGGAGAGGAACCCTTCCGGTG TGACCGCGGCTGGTGCGCCACCTATACATATATCAATCACCGTAAGGTGC AACGAAAAGGCTACATTTGTAGGGTCCAGAGCAAACGAGAGGGAGCAGAG AAAGAAGCCACACACGGCTTGTTCCGTCTCGGGTTTGTAGGCATGCAAGG CCTAAGGTTAGATGACCTCGGCTTCCTGCTCATGAGTGTACCCTTCCCCC CGACCCCCTGCAGATGTGTTGGTAGGGGATGAAGGGGCGTTCTTGGATGA CGAAGATCTGGACGATTTCAGCGACGACGATGACGATGACGACGACGATG ATGCCTGATTACGACGATCAGAAGCAGAGCTTGCAGCTGTGCGGTAGGTA TCGTCGATCCCCATAGTTGCAGATAAACGTCGCTCATGGAGGTTGACCGT CCTGTGAAAAGAGATTGGCATTCCGGCTAGAAGGATGACACTCCCGCGAG AACAGGTTGAAAGTCATGCGAGAAGAGAAGAGCAATACGCCGGCCATCGA GCTTAGAACGAATTAGGCTCAGGGGTTGCACTGAGTGGCCTCGTGATGGT TGAAAGCTTTTCCGGGGTCGATGCGTTCCTTGATGCCCGCTGTGGCAGCC TAAGGCTGACGGAGCACACCAACTTATAAGCAACGGCGATGACGCAGGGA TAGCCCCAGCGGACGACAGGGCCGAGCGTGCATCCCGAAGCAGACCTAAA CGTTGAGGGCGTGGACGACGACGAAGATTGAGACGGGGTTTGAAGAGAAG GAAGAGGAGAAGCATCAATTTAAGGGTCAAGCCTCGGCTGTCTCAATTGG TCTGTGCCACGGTTGTTGTTCTTTCAAGTCTTTGCTACTGATGCGTTCCA GGTCTCAACTACGGTGCTTCCAGGTCTTGCACTGTTGTGTTGCAGGTTTT GACTACTACGGTGTTCTGGCTTGGACTGCTAAGACTAAGCATGCTGCTGT ATCTCAAGTCATGTCTTTTCCTTCTCTTAGAAGCCCACTCGCGCATCATT TACGCCACGATGGGCTTGCTTGCTGCTTTTCCGGGGGAAGGTGTTGGACG ATTTTTCGGTGTTAGGGCGGACGCTGCCGGGCATGAAGGAGCGACGACCA CGAAGACGATGGCCCATCAGATTAAGG
back to top

Coding sequence (CDS) from alignment at P-lacustris_contig1240:16847..29173+

>mRNA_P-lacustris_contig1240.1757.1 ID=mRNA_P-lacustris_contig1240.1757.1|Name=mRNA_P-lacustris_contig1240.1757.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1092bp|location=Sequence derived from alignment at P-lacustris_contig1240:16847..29173+ (Pleurocladia lacustris SAG_25_93)
ATGAGTGGGTTCGAAAATGAGTGGGTTCGAAACCAACCACGAGGAAGAGC
AGTCGATGGAGCTAGAGGCCCTGGAGGCGATCTACGCCGACTTGTTCAGC
ATCGTCAGCAAGAAGCCGCTAGAATGGAAATTGCACCTCGAACCAACCGA
GGGCGGCGAGGGAGAGGTTAACCACGCCAACCACGAGGAAGAGCAGTCGA
TGGAGCTAGAGGCCCTGGAGGCGATCTACGCCGACTTGTTCAGCATCGTC
AGCAAGAAGCCGCTAGAATGGAAATTGCACCTCGAACCAACCGAGGGCGG
CGAGGGAGAGGTTAACCACGTTGGGATAGACTTTACCTGCCGGATCCCCG
AGAGATATCCCGACGAGGCGCCAGGAGTCGCCGTCGAGGCAACTAAGGGC
CTGACACCCAAGCAGGTCCAGGAACTCCTGCGGGTGGCGCAAAAAGAGTT
GGGATAGACTTTACCTGCCGGATCCCCGAGAGATATCCCGACGAGGCGCC
AGGAGTCGCCGTCGAGGCAACTAAGGGCCTGACACCCAAGCAGGTCCAGG
AACTCCTGCGGGTGGCGCAAAAAGAGGCTGGGGAGAACGTAGGCATGGCG
ATGGGCTTCACAATCGCCGAGAGCTTGAAGGAGTGGCTCGCCGACAACAA
CGTCCCCTCTGCGGTGGACGGGCTGGGGAGAACGTAGGCATGGCGATGGG
CTTCACAATCGCCGAGAGCTTGAAGGAGTGGCTCGCCGACAACAACGTCC
CCTCTGCGGTGGACGGGTCGATGCACGGCGAGATGCTTCGGAGGATGGCG
GAGGGGGACAGGGATAGGCGAAAGGAGAAAGAAGTCAAGGAGGCCGAGGC
AAAGGTCGATGCACGGCGAGATGCTTCGGAGGATGGCGGAGGGGGACAGG
GATAGGCGAAAGGAGAAAGAAGTCAAGGAGGCCGAGGCAAAGGCACGCGC
GGAGGACGACGAAGACGAAGAAACCATCCGAAGGAGAAGACAGATCGACG
GAACCCCGTCACCGTAGGCACGCGCGGAGGACGACGAAGACGAAGAAACC
ATCCGAAGGAGAAGACAGATCGACGGAACCCCGTCACCGTAG
back to top