prot_P-lacustris_contig124.1741.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig124.1741.1
Unique Nameprot_P-lacustris_contig124.1741.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length150
Homology
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BLAST of mRNA_P-lacustris_contig124.1741.1 vs. uniprot
Match: D8LU96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU96_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 2.830e-23
Identity = 55/79 (69.62%), Postives = 62/79 (78.48%), Query Frame = 0 
Query:   59 PSSDESAWDFDRFLEEQRRKEIQHDDHKAKVFQKEDRNLAFQRQSLKQRHLAGSEDGVGEDPLALPAGCTASASQEREG 137
            PS+DES WDF RFLEEQR KEIQHDD K K+FQKEDR+LA QRQSLK+R+L  SED +GEDPL L    TA A Q+ EG
Sbjct:  177 PSTDESGWDFGRFLEEQRLKEIQHDDRKEKIFQKEDRHLACQRQSLKKRYLLDSEDFIGEDPLGLLDDTTAPAFQQEEG 255
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig124.1741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU96_ECTSI2.830e-2369.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig124contigP-lacustris_contig124:8955..10433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig124.1741.1mRNA_P-lacustris_contig124.1741.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig124 8241..12611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig124.1741.1 ID=prot_P-lacustris_contig124.1741.1|Name=mRNA_P-lacustris_contig124.1741.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=150bp
MIGASRGHLNGRTQGALRKQYSSSQLELNNRLRGEATGDHSFEGENVSET
ESARALSSPSSDESAWDFDRFLEEQRRKEIQHDDHKAKVFQKEDRNLAFQ
RQSLKQRHLAGSEDGVGEDPLALPAGCTASASQEREGVGRIVSSSFLER*
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