prot_P-lacustris_contig1226.1683.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1226.1683.1
Unique Nameprot_P-lacustris_contig1226.1683.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length115
Homology
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A6H5KSN1_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSN1_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 7.010e-70
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0 
Query:    1 MEVEDRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFVRG 112
            MEVEDRYEGRGGVFESVDVG  GGPQRSVEGWILFVRNVHEEAQEDDIMDKFSE+GAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQ AIDEMDGSQLL+QDISV+WAFV+G
Sbjct:   70 MEVEDRYEGRGGVFESVDVGSAGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEYGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQAAIDEMDGSQLLDQDISVSWAFVKG 181
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A7S2G621_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G621_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.660e-50
Identity = 80/107 (74.77%), Postives = 93/107 (86.92%), Query Frame = 0 
Query:    4 EDRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFV 110
            E+RY+GRGGVFESVD G  GGP +SVEGWILFVRNVHEEAQEDDI+DKFSE G V+N+HVNLDRRTGFVKGY LVEFE +EEA+ AI+ ++G +LL Q ISV WAF+
Sbjct:   53 EERYDGRGGVFESVDAGGEGGPLQSVEGWILFVRNVHEEAQEDDILDKFSESGDVRNIHVNLDRRTGFVKGYALVEFESREEAENAIETLNGEELLGQTISVDWAFL 159
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A7S3GV69_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV69_9STRA)

HSP 1 Score: 154 bits (389), Expect = 7.890e-46
Identity = 72/105 (68.57%), Postives = 87/105 (82.86%), Query Frame = 0 
Query:    5 DRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAF 109
            DRY GRGGVFE++  G   GP +S+EGWI+FV NVH+EAQEDDI+DKFSE+G VKN+HVNLDRRTGFVKGY LVEFE+ ++AQ AI  +DG +LL+Q I V WAF
Sbjct:   53 DRYNGRGGVFENIQRGSGAGPLQSIEGWIVFVTNVHQEAQEDDILDKFSEYGTVKNIHVNLDRRTGFVKGYALVEFEELKDAQAAIQGLDGKKLLDQVIQVDWAF 157
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A7S2DBP5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBP5_9STRA)

HSP 1 Score: 154 bits (389), Expect = 8.390e-46
Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 0 
Query:    1 MEVEDRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFV 110
            M+ EDRY+GRGG+FESV+     GP  SVEGWILF+R VHEEAQEDDI+DKF E G V+N+HVNLDRRTGFVKGY LVE+E  EEA  AI+  +G +LL Q ISV WAF+
Sbjct:   40 MDTEDRYDGRGGIFESVETADGVGPAESVEGWILFIRGVHEEAQEDDILDKFLECGEVRNIHVNLDRRTGFVKGYALVEYESFEEATSAIETFNGQELLGQTISVDWAFL 149
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A7S2S198_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S198_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.030e-43
Identity = 70/113 (61.95%), Postives = 91/113 (80.53%), Query Frame = 0 
Query:    1 MEVEDRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFVRGA 113
            M+ E+RYEGRGGVF+S+  G   GP +SVEGWILFVR VHEEAQEDDI+DKF++FG V+N+ VNLDRRTGFVKGY L+E+ + +EA  A++ M+G ++L Q ISV WAF+  +
Sbjct:   47 MDAEERYEGRGGVFDSI-AGDGPGPAKSVEGWILFVRGVHEEAQEDDILDKFADFGEVRNIAVNLDRRTGFVKGYALIEYAEHDEAAKALEAMNGDEILGQTISVDWAFLESS 158
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A7S0E2Z3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E2Z3_9CRYP)

HSP 1 Score: 147 bits (370), Expect = 5.730e-43
Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 0 
Query:    4 EDRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFVRGALR 115
            EDRY G+ G FESVD     GP +SVEGWI+FV  +HEEA E+DI DKFSE+G +K + + LDRRTGFVKGY LVE+EKK EAQ AI++M+G++L+EQ ++V WAF +G +R
Sbjct:   37 EDRYAGKSGQFESVDTEGGPGPSKSVEGWIVFVMGIHEEANEEDIYDKFSEYGEIKQMQLPLDRRTGFVKGYALVEYEKKSEAQKAIEQMNGAELMEQTLTVDWAFSKGPIR 148
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A6U2CUA9_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A6U2CUA9_HEMAN)

HSP 1 Score: 144 bits (363), Expect = 1.320e-41
Identity = 67/115 (58.26%), Postives = 88/115 (76.52%), Query Frame = 0 
Query:    1 MEVEDRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFVRGALR 115
            ME E+RY GR G FESVD     GP +SVEGWI FV  ++EEA E+D+ DKFS+FG +KNL + LDRRTGFVKGY LVE+E ++EAQ AI+EM+G++ +EQ ++V WAF +G  +
Sbjct:   58 MEAEERYSGRAGQFESVDNEGGKGPAKSVEGWICFVTGINEEANEEDVYDKFSDFGEIKNLQLPLDRRTGFVKGYALVEYELRKEAQAAIEEMNGAEFMEQTLTVDWAFTKGPFK 172
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A7S0WPK5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WPK5_9CHLO)

HSP 1 Score: 144 bits (362), Expect = 1.350e-41
Identity = 67/115 (58.26%), Postives = 92/115 (80.00%), Query Frame = 0 
Query:    1 MEVEDRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFVRGALR 115
            M+VE R+ G+   +ES++ G   GP +SVEGWI+ V  VHEEAQEDD+ + F+E+G ++NLH+NLDRRTGFVKGY ++E+E K+EAQ AID ++G+QLL+Q ISVTWAF +G L+
Sbjct:   48 MDVEQRFTGK---YESLESGTGPGPAKSVEGWIVMVTGVHEEAQEDDLHEAFAEYGEIQNLHLNLDRRTGFVKGYAMLEYESKKEAQAAIDSLNGTQLLDQTISVTWAFSKGPLK 159
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: B3RRM4_TRIAD (RNA-binding protein 8A n=2 Tax=Trichoplax TaxID=10227 RepID=B3RRM4_TRIAD)

HSP 1 Score: 142 bits (359), Expect = 3.850e-41
Identity = 68/101 (67.33%), Postives = 83/101 (82.18%), Query Frame = 0 
Query:   14 FESVDVGP--TGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFVRG 112
            +ES+DV      GPQRSVEGWI+FV N+HEEAQEDD+ +KF+E+G VKNLH+NLDRRTGF+KGY LVEFE K+EAQ AID ++G+ LLEQ I V W FV+G
Sbjct:   54 YESMDVDGDYATGPQRSVEGWIVFVANIHEEAQEDDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAIDNLNGTNLLEQTIKVDWCFVKG 154
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BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Match: A0A0G4H5U6_9ALVE (RRM domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H5U6_9ALVE)

HSP 1 Score: 141 bits (356), Expect = 6.210e-41
Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 0 
Query:    5 DRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMDKFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLEQDISVTWAFVR 111
            +RYEG+GGVFES+    +G   +SVEGWI+ VR +HEEAQEDDI D FS +G +KNLH+NLDRRTGFVKGY L+E+E+ +EAQ AI  M+G +LL Q + V WAFVR
Sbjct:   39 ERYEGQGGVFESLSHDASGTAAKSVEGWIVIVRGLHEEAQEDDIHDSFSGYGEIKNLHLNLDRRTGFVKGYALIEYEQFDEAQAAIHAMNGKELLSQPVHVDWAFVR 145
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1226.1683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSN1_9PHAE7.010e-7093.75RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2G621_9STRA1.660e-5074.77Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3GV69_9STRA7.890e-4668.57Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2DBP5_9STRA8.390e-4667.27Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2S198_9STRA2.030e-4361.95Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S0E2Z3_9CRYP5.730e-4360.71Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A6U2CUA9_HEMAN1.320e-4158.26Hypothetical protein n=3 Tax=Hemiselmis TaxID=7792... [more]
A0A7S0WPK5_9CHLO1.350e-4158.26Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
B3RRM4_TRIAD3.850e-4167.33RNA-binding protein 8A n=2 Tax=Trichoplax TaxID=10... [more]
A0A0G4H5U6_9ALVE6.210e-4162.62RRM domain-containing protein n=1 Tax=Chromera vel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 33..106
e-value: 5.3E-18
score: 75.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 34..101
e-value: 3.2E-18
score: 65.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 32..110
score: 15.494
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..114
e-value: 3.0E-28
score: 100.8
NoneNo IPR availablePANTHERPTHR45894FAMILY NOT NAMEDcoord: 11..113
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 24..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1226contigP-lacustris_contig1226:11916..15335 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1226.1683.1mRNA_P-lacustris_contig1226.1683.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1226 11846..15335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1226.1683.1 ID=prot_P-lacustris_contig1226.1683.1|Name=mRNA_P-lacustris_contig1226.1683.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=115bp
MEVEDRYEGRGGVFESVDVGPTGGPQRSVEGWILFVRNVHEEAQEDDIMD
KFSEFGAVKNLHVNLDRRTGFVKGYCLVEFEKKEEAQLAIDEMDGSQLLE
QDISVTWAFVRGALR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf