prot_P-lacustris_contig120.1525.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig120.1525.1
Unique Name	prot_P-lacustris_contig120.1525.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	316

Homology

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: A0A6H5L4Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y5_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 5.510e-111
Identity = 171/213 (80.28%), Postives = 188/213 (88.26%), Query Frame = 0

Query:   74 RKAAPTREGASTRISAGTAMTTK-EDFESYDGGDYTIFIGRGMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYAKSG 285
            R+  P +   S+  SA TAMTT  EDFE+YDGGDY IF+GRGMERFRRGEV  SVSDFDRAI LQPRL AYMWQRGISLYYA+QFEEGS+QFR DVALNPNDTEEAIWTF+CE+R+PS+GFATAKQRLVKISNERRPYMRAAYSLFKGDA ESDLAKQM EVS G+  G AGSGAPYFY NLYLGLY+EAKG+DVLARKY++AAV+S YAKSG
Sbjct:   43 RQLQPVQAITSSSTSALTAMTTTHEDFEAYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADQFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQM-EVSLGS-NGVAGSGAPYFYVNLYLGLYSEAKGDDVLARKYISAAVRSPYAKSG 253

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: D8LR87_ECTSI (Binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR87_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 5.910e-108
Identity = 161/192 (83.85%), Postives = 177/192 (92.19%), Query Frame = 0

Query:   94 TTKEDFESYDGGDYTIFIGRGMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYAKSG 285
            TT EDFE+YDGGDY IF+GRGMERFRRGEV  SVSDFDRAI LQPRL AYMWQRGISLYYA++FEEGS+QFR DVALNPNDTEEAIWTF+CE+R+PS+GFATAKQRLVKISNERRPYMRAAYSLFKGDA ESDLAKQM E S G+  G AGSGAPYFYANLYLGLY+EAKG+DVLARKY++AAV+S Y+KSG
Sbjct:    3 TTHEDFETYDGGDYKIFVGRGMERFRRGEVAGSVSDFDRAISLQPRLEAYMWQRGISLYYADRFEEGSRQFRKDVALNPNDTEEAIWTFMCESRIPSVGFATAKQRLVKISNERRPYMRAAYSLFKGDASESDLAKQM-EGSLGS-NGAAGSGAPYFYANLYLGLYSEAKGDDVLARKYISAAVRSPYSKSG 192

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: A0A835ZJI4_9STRA (Binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI4_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.510e-58
Identity = 102/197 (51.78%), Postives = 135/197 (68.53%), Query Frame = 0

Query:   89 AGTAMTTKEDFESYDGGDYTIFIGRGMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYAKSG 285
            A  A   + D E+Y G +  ++I RGMERFR+ +V++S+SDFDRA++L P L  Y+WQRG+SLYYA++F EG+ QFR DV++NPNDTEEAIW F CEAR  ++GF  A++RL+K+  + RPYMR AYSLF+G   E DLA        G  +  +     +FYANLYLGLYAE + E  LAR Y+  AV S Y  +G
Sbjct:    2 ATRAAPQQFDPETYTGSNPKVYIVRGMERFRKAKVQESISDFDRALQLSPALGPYLWQRGLSLYYADRFAEGAAQFRLDVSVNPNDTEEAIWAFACEAR--TLGFQEARKRLLKVGQDTRPYMRTAYSLFQGSTSEQDLAMV------GQTDDRS-----HFYANLYLGLYAECREEVDLARHYIGLAVGSKYCATG 185

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: A0A7S1JEY7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JEY7_9EUGL)

HSP 1 Score: 193 bits (490), Expect = 1.080e-55
Identity = 93/172 (54.07%), Postives = 122/172 (70.93%), Query Frame = 0

Query:  114 GMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYAKSG 285
            GM++F +G+V+ S+ DFDR I   PR+  YMWQRG+SLYYA + +EGS+QFR DVA+NPNDTEEAIW FLCEAR PSIGF  A+  ++++  + RPYMRAAY LF+G   E  L +  ++            G   FY+NLYLGLYAEAKG+ V A++Y++AAV S Y +SG
Sbjct:  167 GMQKFTKGDVQGSIEDFDRIIAGAPRMEPYMWQRGLSLYYAEELQEGSRQFRRDVAVNPNDTEEAIWAFLCEARDPSIGFEKARTNMLQVGRDSRPYMRAAYDLFRGTGTEEGLKQAAVD------------GPSEFYSNLYLGLYAEAKGDSVAAQQYISAAVNSPYRRSG 326

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: A0A7S2B9N6_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9N6_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.460e-48
Identity = 91/178 (51.12%), Postives = 114/178 (64.04%), Query Frame = 0

Query:  106 DYTIFIGRGMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYAK 283
            D  I   RGM+ FR+G+V  S+  FD AI    R + Y+WQRG+SLYYA +FEEG+ QFR DVA NPNDTEEAIWTFLCEA+    GF  A+++++K+  + RP MR    LF GDA E DLA    +  PG+           FYA LYLGLY EAKG+ V A+ Y+  AV S+Y K
Sbjct:   68 DPRIATSRGMQAFRKGDVAGSLEQFDAAIAADERYTLYLWQRGLSLYYAGKFEEGAVQFRRDVAANPNDTEEAIWTFLCEAQTN--GFEAARKQMLKVGKDSRPIMRMVNELFLGDASEEDLATAGHKAGPGS--------RAEFYALLYLGLYNEAKGDAVHAKGYIQQAVSSAYGK 235

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: A0A7S4C893_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C893_9EUGL)

HSP 1 Score: 165 bits (417), Expect = 2.320e-47
Identity = 82/146 (56.16%), Postives = 104/146 (71.23%), Query Frame = 0

Query:  140 LSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYAKSG 285
            ++ YMWQRG+SLYYA   EEGS QFR DVA+NPNDTEEAIW FLCEAR PSIGFA A+Q ++++  + RPYMRAAY+LF+G   E+DL     +V            A  FY++LYLGLYAEA+G+   A++Y++AA  S YA SG
Sbjct:    1 MAPYMWQRGLSLYYAEALEEGSAQFRGDVAVNPNDTEEAIWAFLCEARDPSIGFAAARQNILRVGRDSRPYMRAAYNLFQGTGTEADLEAAGRDV------------ASRFYSDLYLGLYAEARGDAATAQRYISAAANSPYAISG 134

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: W7U3Q5_9STRA (Tetratricopeptide TPR2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Q5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.840e-46
Identity = 94/195 (48.21%), Postives = 121/195 (62.05%), Query Frame = 0

Query:  109 IFIGRGMERFRRGEVEDSVSDFDRAIRLQ-PRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYAKSGTT----CATSHAYIRKY 298
            + +  GME FRRG+VE S+  FD A+ L   +L  Y+WQRG+SLYYA ++ EG++QFR DVA+NP DTEEAIW FLCEA+V   GF  A+++++ +  + RPYMR AY LFKG   E DLAK          EG   S    FYA LYLGLYAEA+ E   AR Y+ A+V + Y  +        A  H  IRK+
Sbjct:   81 VLVSEGMELFRRGDVEGSIMYFDEALLLGGAQLEPYLWQRGLSLYYAGRYREGAEQFRKDVAVNPADTEEAIWAFLCEAQVD--GFEEARRKMLIVQTDPRPYMRRAYELFKGTCSEEDLAK----------EGANLSSPAAFYALLYLGLYAEARDEADKARNYIHASVATPYGNANRDYMAGLARVHLIIRKW 263

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: A0A803KNX0_CHEQI (Uncharacterized protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803KNX0_CHEQI)

HSP 1 Score: 163 bits (413), Expect = 4.350e-45
Identity = 85/174 (48.85%), Postives = 111/174 (63.79%), Query Frame = 0

Query:  109 IFIGRGMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYA 282
            + I RGM+ FR+G+V  SV +FDRAI L PR  AY+WQRG+SLYY ++FEEG++QFR DVA NPNDTEE+IW FLCEAR+   G   A++R +++  + RP MR  Y +FK       L         G           YFYA+LY GLY EA GE+  A+KY+ A+ +S YA
Sbjct:   81 LAIRRGMQLFRQGDVMGSVVEFDRAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEARL--YGVDEARKRYLEVGRDPRPVMRQVYDMFKDGGDPQKLVDTFSNSRDGE----------YFYASLYAGLYHEALGEEDAAKKYIVASCQSPYA 242

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: A0A836BA97_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BA97_9CHLO)

HSP 1 Score: 164 bits (414), Expect = 5.600e-45
Identity = 88/201 (43.78%), Postives = 120/201 (59.70%), Query Frame = 0

Query:   83 ASTRISAGTAMTTKEDFESYDGGDYTIFIGRGMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSYAK 283
            A    + G A+          GGD       GM++FRR EVE SV DFDR I+L P +  YMWQRG+SLYY  +F EG++QFR DVA+NPNDTEE+IWTFLCEA++  +G   A+++ +++  + RP MRAAY  FK       +  Q+          T   G   FY  LY+GL+ EA+G+   A+K +TAAV + YA+
Sbjct:   67 AGALAAGGVALAASLGGLGAGGGDPRTLTRSGMDKFRRNEVEASVDDFDRVIQLAPSMKPYMWQRGLSLYYLGRFAEGAEQFRIDVAVNPNDTEESIWTFLCEAQM--VGAEQARKQFLEVGRDSRPVMRAAYECFKTGQPPEKIMAQV----------TDNGGHDTFYGLLYVGLWHEAEGDTAEAQKAITAAVATPYAR 255

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BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Match: A0A7S0D5P5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D5P5_MICPS)

HSP 1 Score: 160 bits (405), Expect = 1.490e-44
Identity = 84/174 (48.28%), Postives = 107/174 (61.49%), Query Frame = 0

Query:  108 TIFIGRGMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGISLYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRLVKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYFYANLYLGLYAEAKGEDVLARKYVTAAVKSSY 281
            ++   RGM +F +G+V+ S++DFD  I   P  + YMWQRG+SLYYA +  EGS QFR DVA+NPNDTEEA+W FLCEAR   IGF  A++ L+ +  + R YMRAAY+LF G   E  L                G  A  FY  LYLGLY EAKG++  A+  V AAV + Y
Sbjct:   30 SLLTRRGMAKFTQGDVDGSIADFDAVIAAAPGRAPYMWQRGLSLYYAERLREGSAQFRRDVAVNPNDTEEAVWAFLCEARDKDIGFEKAREDLLVVGRDPRAYMRAAYALFAGTGDEDSL----------RAVAANGGAAEDFYTWLYLGLYREAKGDENGAKAAVLAAVATPY 193

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig120.1525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L4Y5_9PHAE	5.510e-111	80.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LR87_ECTSI	5.910e-108	83.85	Binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A835ZJI4_9STRA	1.510e-58	51.78	Binding protein n=1 Tax=Tribonema minus TaxID=3033...	[more]
A0A7S1JEY7_9EUGL	1.080e-55	54.07	Hypothetical protein n=1 Tax=Eutreptiella gymnasti...	[more]
A0A7S2B9N6_9STRA	4.460e-48	51.12	Hypothetical protein n=2 Tax=Florenciella parvula ...	[more]
A0A7S4C893_9EUGL	2.320e-47	56.16	Hypothetical protein (Fragment) n=1 Tax=Eutreptiel...	[more]
W7U3Q5_9STRA	4.840e-46	48.21	Tetratricopeptide TPR2 n=1 Tax=Nannochloropsis gad...	[more]
A0A803KNX0_CHEQI	4.350e-45	48.85	Uncharacterized protein n=2 Tax=Chenopodium quinoa...	[more]
A0A836BA97_9CHLO	5.600e-45	43.78	Uncharacterized protein n=1 Tax=Chlamydomonas schl...	[more]
A0A7S0D5P5_MICPS	1.490e-44	48.28	Hypothetical protein n=1 Tax=Micromonas pusilla Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 103..290 e-value: 7.7E-21 score: 76.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 106..277
None	No IPR available	PANTHER	PTHR47908	FAMILY NOT NAMED	coord: 102..285
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 47..70
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..46
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 71..315
None	No IPR available	TMHMM	TMhelix		coord: 47..69
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 107..140 score: 8.968
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 141..174 score: 7.051
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 107..174 score: 13.505

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig120	contig	P-lacustris_contig120:149500..154230 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig120.1525.1	mRNA_P-lacustris_contig120.1525.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig120 149491..155624 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig120.1525.1 ID=prot_P-lacustris_contig120.1525.1|Name=mRNA_P-lacustris_contig120.1525.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=316bp
MNQLHMAVHSSPASTSIFARNIFRFLSRSLSRYHGQPQDLMPHVSRVALL
LSPLFLGCCCAFVVKPLYLARRVRKAAPTREGASTRISAGTAMTTKEDFE
SYDGGDYTIFIGRGMERFRRGEVEDSVSDFDRAIRLQPRLSAYMWQRGIS
LYYANQFEEGSKQFRADVALNPNDTEEAIWTFLCEARVPSIGFATAKQRL
VKISNERRPYMRAAYSLFKGDAKESDLAKQMMEVSPGNVEGTAGSGAPYF
YANLYLGLYAEAKGEDVLARKYVTAAVKSSYAKSGTTCATSHAYIRKYEG
GKSSELVNLPACQHR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR019734	TPR_repeat
IPR013026	TPR-contain_dom