prot_P-lacustris_contig1150.1170.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig1150.1170.1
Unique Name	prot_P-lacustris_contig1150.1170.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	213

Homology

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: D7FKM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM9_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.310e-56
Identity = 127/215 (59.07%), Postives = 148/215 (68.84%), Query Frame = 0

Query:    1 MVFSSRMALSSFLLWPVAKAYVQLGLNAIA----LATTRT---QARHLFLTQ-QSFSDRTVDDSSRSPSSASSTSRGQFLGGVLVSSAALFACAAGAALPEQQRRVARMVCAPGRSRNASAIKIAAGPPESESAASSAISGLVAGAAVSTSKQLLLHPLDTVKTRLQLPRGGSSPELFRGLYDGVLPPLLAGLPSGALFFQRRTPLAPLLATFLG 207
            MV   R+AL S L WPVA AYVQLGL+A+A    L T+R    Q R L+++Q +S S+R V   SR+P  A STSR QFLGG+L SSAAL AC A A   EQ+  V+      G+         A   PESESAASSAISGLVAGAAVSTSKQLLL+P+DTVKTRLQLP+ GS PELFRGLYDGVLPPLLAGLPSGALFF  +   +  ++   G
Sbjct:    1 MVCCRRLALPSVLAWPVAHAYVQLGLHAVARPDVLTTSRVKPQQRRSLYMSQGESCSNRRVGGRSRAPLGAGSTSREQFLGGLLASSAALLACTAAANAAEQKAEVSNAPAVAGQLEYQQPQPTAV-VPESESAASSAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPQDGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSG 214

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A0G4F9G4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F9G4_9ALVE)

HSP 1 Score: 70.9 bits (172), Expect = 9.890e-11
Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 0

Query:  131 ISGLVAGAAVSTSKQLLLHPLDTVKTRLQLPRGGS--SPELFRGLYDGVLPPLLAGLPSGALFF 192
            +SGL++GAA   +K+++LHP+DTVK RLQ   G    SP + +GLYDGV+P L+ G P+G+LFF
Sbjct:  222 LSGLLSGAASRIAKEVVLHPIDTVKARLQFREGARVFSPSMLKGLYDGVVPALVVGTPAGSLFF 285

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A7S1TQC4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQC4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 9.960e-11
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0

Query:  133 GLVAGAAVSTSKQLLLHPLDTVKTRLQLPR-GGSSPELFRGLYDGVLPPLLAGLPSGALFF 192
            GL+AG    T+K L+LHP DTVKTR+Q+    G    LF  LYDG+LPPL+AG P  ALFF
Sbjct:   43 GLLAGGVSRTAKLLVLHPADTVKTRVQVGAIAGRQGALFADLYDGILPPLVAGTPGSALFF 103

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A7S3JUU9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUU9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 6.060e-10
Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 0

Query:  131 ISGLVAGAAVSTSKQLLLHPLDTVKTRLQLPRGGS---SPELFRGLYDGVLPPLLAGLPSGALFFQRRTPLAPLLATFLGD 208
            ISGL  GAA   SK ++LHP+DTVKTRLQ  R GS   +  +F   +DG+L PLL G+P+GALFF  +   A L   F  D
Sbjct:   76 ISGLAGGAAQRLSKDIVLHPIDTVKTRLQ--RAGSRRLTRRIFADPFDGILAPLLIGVPAGALFFGVKDATAVLCKGFNED 154

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A0M0K8D7_9EUKA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8D7_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 7.380e-10
Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 0

Query:  131 ISGLVAGAAVSTSKQLLLHPLDTVKTRLQLP---RGGSSPELFRGLYDGVLPPLLAGLPSGALFFQRRTPLAPLLATFLGDSTRT 212
            +SGL+AG A  T K++ LHPLDTVKTRLQL    RG   P L++ +Y G+ P +++G P+ ++FF  +  +   L   LGD+  T
Sbjct:   59 LSGLIAGFAQKTIKEVTLHPLDTVKTRLQLTSTRRGLLDPALYKDVYSGLAPAVVSGAPAASVFFAIKDSVLQQLKPQLGDTGGT 143

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A7S1TRM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRM5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.790e-9
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0

Query:  133 GLVAGAAVSTSKQLLLHPLDTVKTRLQLPR-GGSSPELFRGLYDGVLPPLLAGLPSGALFF 192
            GL+AG    T+K L+LHP DTVKTR+Q+    G    LF  LYDG+LPPL+AG P  ALFF
Sbjct:   43 GLLAGGVSRTAKLLVLHPADTVKTRVQVGAIAGRQGALFADLYDGILPPLVAGTPGSALFF 103

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A7R9U610_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U610_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.380e-9
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0

Query:  142 TSKQLLLHPLDTVKTRLQLPR-GGSSPELFRGLYDGVLPPLLAGLPSGALFFQRR 195
            T+K L+LHP+DTVKTR+QL +  G    LF  LYDG+LPPL+AG P  ALFF  +
Sbjct:    6 TAKLLVLHPIDTVKTRVQLAKVSGRKGGLFDDLYDGILPPLVAGTPGSALFFATK 60

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: M1V6P2_CYAM1 (Probable mitochondrial carrier proteins Pet8p n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6P2_CYAM1)

HSP 1 Score: 65.1 bits (157), Expect = 6.260e-9
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 0

Query:  133 GLVAGAAVSTSKQLLLHPLDTVKTRLQLPRGGSSPELFRGLYDGVLPPLLAGLPSGALFF---------------QRRTPLAPLLATFLGD 208
            GL++GAA  T   L+L PLDT+KTRLQ+P      + FRG+Y+G+LP ++A  P+ A FF               Q   PL  ++A   GD
Sbjct:   47 GLISGAAAGTIADLVLFPLDTLKTRLQVPGSRLGAQTFRGIYNGILPAIVASAPAAAAFFGTYDWLKKTLTINFPQSAPPLVHMVAAVGGD 137

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A813G9K7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G9K7_POLGL)

HSP 1 Score: 62.8 bits (151), Expect = 5.290e-8
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0

Query:  130 AISGLVAGAAVSTSKQLLLHPLDTVKTRLQL-PRGGSSP-----ELFRGLYDGVLPPLLAGLPSGALFFQRRTPLAPLL 202
            A SG + G A + +KQL+LHP DTVKTRLQ  P GG+       +LF+GLY G LP L++G P  A FF  +   A  L
Sbjct:  150 AASGALQGIAQNLAKQLVLHPFDTVKTRLQASPDGGAKDLVDRKDLFQGLYRGFLPCLVSGTPGSAAFFAAKEAAASAL 228

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BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A812JQ95_9DINO (SAMC2 protein (Fragment) n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JQ95_9DINO)

HSP 1 Score: 62.4 bits (150), Expect = 7.750e-8
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0

Query:  128 SSAISGLVAGAAVSTSKQLLLHPLDTVKTRLQLPRG---GSSPELFRGLYDGVLPPLLAGLPSGALFFQRR 195
            S+A SG + G A + +KQ++LHP DTVKTRLQ   G    S  ELFR +Y G+LP L++G P  A FF  +
Sbjct:   74 SAAWSGALQGIAQNIAKQVVLHPFDTVKTRLQAQAGRPEASRAELFRDVYRGLLPTLVSGTPGSAAFFAAK 144

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKM9_ECTSI	1.310e-56	59.07	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A0G4F9G4_9ALVE	9.890e-11	53.13	Uncharacterized protein n=1 Tax=Chromera velia CCM...	[more]
A0A7S1TQC4_9STRA	9.960e-11	57.38	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S3JUU9_9STRA	6.060e-10	50.62	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A0M0K8D7_9EUKA	7.380e-10	43.53	S-adenosylmethionine mitochondrial carrier protein...	[more]
A0A7S1TRM5_9STRA	1.790e-9	57.38	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7R9U610_9STRA	2.380e-9	58.18	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
M1V6P2_CYAM1	6.260e-9	39.56	Probable mitochondrial carrier proteins Pet8p n=1 ...	[more]
A0A813G9K7_POLGL	5.290e-8	48.10	Hypothetical protein n=2 Tax=Polarella glacialis T...	[more]
A0A812JQ95_9DINO	7.750e-8	49.30	SAMC2 protein (Fragment) n=1 Tax=Symbiodinium nata...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 130..165 e-value: 5.7E-5 score: 23.0
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 128..201 score: 9.706
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	1.50.40.10		coord: 111..196 e-value: 3.7E-8 score: 34.3
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	103506	Mitochondrial carrier	coord: 130..194
None	No IPR available	PANTHER	PTHR45667	FAMILY NOT NAMED	coord: 112..192
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..91
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 92..212
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..70
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..20 score: 0.536
None	No IPR available	TMHMM	TMhelix		coord: 12..34
None	No IPR available	TMHMM	TMhelix		coord: 69..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig1150	contig	P-lacustris_contig1150:47299..49639 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig1150.1170.1	mRNA_P-lacustris_contig1150.1170.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig1150 38943..49639 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig1150.1170.1 ID=prot_P-lacustris_contig1150.1170.1|Name=mRNA_P-lacustris_contig1150.1170.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=213bp
MVFSSRMALSSFLLWPVAKAYVQLGLNAIALATTRTQARHLFLTQQSFSD
RTVDDSSRSPSSASSTSRGQFLGGVLVSSAALFACAAGAALPEQQRRVAR
MVCAPGRSRNASAIKIAAGPPESESAASSAISGLVAGAAVSTSKQLLLHP
LDTVKTRLQLPRGGSSPELFRGLYDGVLPPLLAGLPSGALFFQRRTPLAP
LLATFLGDSTRT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018108	Mitochondrial_sb/sol_carrier
IPR023395	Mt_carrier_dom_sf