mRNA_P-lacustris_contig1150.1170.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: D7FKM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM9_ECTSI) HSP 1 Score: 352 bits (902), Expect = 1.090e-113 Identity = 184/212 (86.79%), Postives = 196/212 (92.45%), Query Frame = 3
Query: 567 VIFSAKDAFSTAISNVSGGQYADLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMTATSDNESYQGSIFGALGTISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVKGLFGVEPRKV 1202
+ FSAKDAFSTAISNVSGGQYA+LTT+AAVGLAQFPYWGIRTPAELLKIRSQAGL S GAG +GAKSILADEG++GLYTGYSSNIAYAFPADAIKFL YGALKRSAKKAKGG KL T+EAA+LGS ASLAAQAVTTPLDVVRTRVMTA SD+E Y+G + GALGTISREE FS LWAGI PRMARSVLSGAIQFGSYEFVKGLFGVEPRK+
Sbjct: 197 LFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFEGAKSILADEGLRGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTAPSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRKL 408
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A8J5XTW0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTW0_DIALT) HSP 1 Score: 164 bits (416), Expect = 4.180e-42 Identity = 100/224 (44.64%), Postives = 137/224 (61.16%), Query Frame = 3
Query: 567 VIFSAKDAFST----AISNVSGGQYA-DLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMTA-----TSDNESYQGSI-------FGALGT-ISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVKGLFG 1184
+ F+AKD A+ + GG Y+ ++TTV AV AQ PYW +RTP ELLK R+Q GL + G A ++ EG+ GL+ G SN+AYA P D +KF+AY ++KR AK+AKGG L T+EA+ G+ S AQA+ TPLDVVRTRV+ A +D + +I FG + + RE+G L+AG+ PR+ R+V SG IQFG+YE + LFG
Sbjct: 164 LFFAAKDGAKAWLRGALGSAYGGSYSKEVTTVLAVLAAQLPYWALRTPFELLKTRAQLGLTAGGEGAWRSAARVVEAEGVAGLFVGAGSNVAYAAPTDVVKFVAYESIKRQAKRAKGGGSLSTLEASACGALGSAIAQALCTPLDVVRTRVIAAQPTGGVADGAATDAAIELADARNFGKVAARLVREDGAGALFAGLLPRVGRAVASGGIQFGAYEATRRLFG 387
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: W7TEJ8_9STRA (S-adenosylmethionine mitochondrial carrier n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEJ8_9STRA) HSP 1 Score: 165 bits (418), Expect = 6.430e-42 Identity = 104/222 (46.85%), Postives = 137/222 (61.71%), Query Frame = 3
Query: 540 PAGRATLRRVIFSAKDAFSTAISNVSGGQYADLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMT----ATSDN----ESYQGSIFGALGTISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVKGLF 1181
PAG A F+ KD N G ++ + TT+AAV A PYW IR PAE+LK + Q GL + AG G + EG++GLY GY SNIAYAFP DAIKF+ Y AL++S RKL +E+++LGS AS AQ ++TPLDVVRTR+MT T+DN + S++ I+ EEG + L++G++PR+ R+ LSGAIQFGSYE KG F
Sbjct: 229 PAGAA-----FFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGL-IDSTAG--GTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFS-----RKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAF 437
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A4D9D9P5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9P5_9STRA) HSP 1 Score: 155 bits (392), Expect = 7.830e-41 Identity = 95/191 (49.74%), Postives = 125/191 (65.45%), Query Frame = 3
Query: 633 DLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMT----ATSDN----ESYQGSIFGALGTISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVKGLF 1181
+ TT+AAV A PYW IR PAE+LK + Q GL + AG G + EG++GLY GY SNIAYAFP DAIKF+ Y AL++S RKL +E+++LGS AS AQ ++TPLDVVRTR+MT T+DN + S++ I+ EEG + L++G++PR+ R+ LSGAIQFGSYE KG F
Sbjct: 11 EATTIAAVFAANIPYWLIRNPAEVLKTQQQTGL-IDSTAG--GTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFS-----RKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVLPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAF 193
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A7S1TRM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRM5_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.850e-39 Identity = 95/207 (45.89%), Postives = 123/207 (59.42%), Query Frame = 3
Query: 567 VIFSAKDAFSTAISNVSGGQYADLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKS-ILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMTATSDNESYQGSIFGALGTISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVKGLFG 1184
+ F+ KD +A + G + + T+ AV LA PYW ++TPAE +K R QA D A+S + E + LY GY SN+AYAFP D IKFL Y LKRSAK+A GG+KL + A LGS ++ AQA+TTPLDV+RTR+M +D E G AL EEG VL+AG R+ R +L GA+QF +YE K LFG
Sbjct: 101 LFFAVKDLVQSAAREGAWGLDSRVVTMIAVFLANIPYWSLQTPAEAIKTRLQARDKDVEPVTPDPAESDVSLRERAEDLYAGYGSNLAYAFPVDVIKFLIYEELKRSAKEANGGQKLSPLRTAFLGSISAATAQALTTPLDVLRTRIMLKGADAEGGAGEEVAALRAAIEEEGVGVLFAGTPQRVLRGMLGGAVQFSTYEVSKQLFG 307
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A7S4C3C4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3C4_CHRCT) HSP 1 Score: 148 bits (373), Expect = 3.240e-36 Identity = 86/202 (42.57%), Postives = 124/202 (61.39%), Query Frame = 3
Query: 567 VIFSAKDAFSTAISNVSGGQYADLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMTATSDNESYQGSIFGALGTISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVK 1172
V F+ KDA + + A T+ AV A PYW +R P E++K R QAG+ + L+ A+ + A+EG++G YTGY SN AYA+P D+IKF+ Y LK+ + AKGG KL VE+A+ G+ ++++AQ++ TPLDV RTR MT + S + I+ EEG L++G+ P+ R+VLSGAIQF +YE K
Sbjct: 168 VFFAVKDAVKQRANALQLDTSA--ATLLAVACANVPYWLVRNPTEVIKARRQAGIVDDS---LEAARKLYAEEGLRGFYTGYVSNYAYAYPVDSIKFVLYELLKKRVRAAKGGAKLSAVESAVGGAVSAVSAQSLATPLDVARTRAMTRPAGAPPM--SPIECVRAIAAEEGLPALFSGVTPKAVRAVLSGAIQFSTYEATK 362
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A0M0K8D7_9EUKA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8D7_9EUKA) HSP 1 Score: 145 bits (366), Expect = 1.110e-35 Identity = 81/177 (45.76%), Postives = 119/177 (67.23%), Query Frame = 3
Query: 642 TVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMTATSDNESYQGSIFGALGTISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVK 1172
TVAAVG A YW +R PAE++K+R Q+G S+ A A ++ + G G Y GY+SN+AYAFP D+ KF+ Y A+K + +++KGG KL +EAA+ G+ A++AAQ V+TPLDV RTR+MT +D + + L ++ EEG L+AG+ P++AR+++SGA+QF E VK
Sbjct: 143 TVAAVGCANLVYWLVRNPAEVIKVRRQSGGESDSAAA---ATALWREIGPGGFYRGYASNVAYAFPVDSSKFVLYSAIKDAWRRSKGGAKLSPLEAAVGGALATMAAQGVSTPLDVARTRIMTLPADQPA--PGVLATLKAVADEEGLRGLYAGLAPKVARALVSGALQFSVLEGVK 314
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A0G4F9G4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F9G4_9ALVE) HSP 1 Score: 148 bits (374), Expect = 3.060e-35 Identity = 100/240 (41.67%), Postives = 133/240 (55.42%), Query Frame = 3
Query: 567 VIFSAKDAFS-TAIS-----NVSGGQYADLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGR----KLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMTATSDNES-------------------YQGSIFGALGTISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVKGLFGVEPRK 1199
+ F KD S TA+ + G L+T+A V A PYW +R PAEL+K R Q G+ ++ + + ++ D+GI GLY GY SN AYA P D +KFL Y +KR ++AK R KL T+E AI G+ AS AQ V+TPLDV+RTR+MT+ + Y+G I I EG +L+AGI PR+AR+V+SGAIQF +YE VK LFG E K
Sbjct: 283 LFFGVKDVASKTALEVLKAKGIEGLTGTQLSTIAGVVAASIPYWAVRQPAELVKTRRQTGVATDS---VKAFQEVVEDDGIGGLYQGYGSNFAYAVPTDIVKFLVYDNVKRQWQQAKRQRGEKDKLSTLEGAIGGAAASCVAQIVSTPLDVIRTRLMTSEKKRKGRLTAEEGQGXXXXXXXXREYEG-ILDCGRKIVEREGAGMLFAGISPRIARAVVSGAIQFSTYELVKNLFGEEAAK 518
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A0G4FJA6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FJA6_VITBC) HSP 1 Score: 142 bits (359), Expect = 8.080e-34 Identity = 98/246 (39.84%), Postives = 128/246 (52.03%), Query Frame = 3
Query: 525 RSLTPPAGRAT-LRRVIFSAKDAFSTAISNVSGGQYADLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVMTATSDNES---------------------------YQGSIFGALGTISREEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVKGL 1178
R + PP T + F KD ++ + T AAV A PYW +RTP+E++K R QAGL + LDG + + +GI GLYTGY++NIAYA+P D IKFL Y +LK + G +L +E GS AS AQ T PLDV+RTR+MT S Y G + + I+ EEG + LW+G+ PR+ R+VLSGAIQFGSYE VKGL
Sbjct: 188 RGIVPPLVVGTPASALFFGVKDTSMAYLAQAGLSGNLQVRTSAAVLAASVPYWLVRTPSEVVKTRCQAGLANNT---LDGIRKTVEQDGIGGLYTGYNANIAYAYPTDVIKFLVYDSLKAAL-----GGELTLLEKTAAGSLASCTAQLFTNPLDVIRTRLMTQDKRETSVAAASPAXXXXXXXXXXXXXXXXXXAAYSGIVDCGM-RIATEEGPARLWSGVSPRLVRAVLSGAIQFGSYELVKGL 424
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Match: A0A7S3JUU9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUU9_9STRA) HSP 1 Score: 139 bits (349), Expect = 4.460e-33 Identity = 92/211 (43.60%), Postives = 120/211 (56.87%), Query Frame = 3
Query: 567 VIFSAKDAFSTAISNVSGGQYADLTTVAAVGLAQFPYWGIRTPAELLKIRSQAGLWSEGGAGLDGAKSILADEGIKGLYTGYSSNIAYAFPADAIKFLAYGALKRSAKKAKGGRKLGTVEAAILGSCASLAAQAVTTPLDVVRTRVM---TATSDNESYQGSIFGALGTIS--REEGFSVLWAGIYPRMARSVLSGAIQFGSYEFVKGLFG 1184
+ F KDA TA+ + G DL V +A PYW IR+P EL+K+R Q + G+ AK I+ EG+ GLY G + AYA P D +KF Y LK+S+ + L + AILGS AS +AQ VTTPLDVVRTR M T S + G + T++ REEG LW+GI PR+ R+++SG +QFGSYEF K FG
Sbjct: 136 LFFGVKDA--TAV--LCKGFNEDLVEFTTVAVANGPYWFIRSPTELIKVRQQLDGTTINMTGITLAKDIIQKEGLSGLYVGAIESYAYALPTDLVKFYVYRKLKKSSLPLTSTKNL-VAKKAILGSIASASAQLVTTPLDVVRTRAMEKRTPQSTTTTTGGDLSIPERTLAIIREEGVGALWSGISPRLLRALVSGGLQFGSYEFTKKAFG 341 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1150.1170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1150.1170.1 >prot_P-lacustris_contig1150.1170.1 ID=prot_P-lacustris_contig1150.1170.1|Name=mRNA_P-lacustris_contig1150.1170.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=213bp MVFSSRMALSSFLLWPVAKAYVQLGLNAIALATTRTQARHLFLTQQSFSDback to top mRNA from alignment at P-lacustris_contig1150:38943..49639- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1150.1170.1 ID=mRNA_P-lacustris_contig1150.1170.1|Name=mRNA_P-lacustris_contig1150.1170.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10697bp|location=Sequence derived from alignment at P-lacustris_contig1150:38943..49639- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1150:38943..49639- >mRNA_P-lacustris_contig1150.1170.1 ID=mRNA_P-lacustris_contig1150.1170.1|Name=mRNA_P-lacustris_contig1150.1170.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1278bp|location=Sequence derived from alignment at P-lacustris_contig1150:38943..49639- (Pleurocladia lacustris SAG_25_93)back to top |