prot_P-lacustris_contig113.1041.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig113.1041.1
Unique Nameprot_P-lacustris_contig113.1041.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length598
Homology
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BLAST of mRNA_P-lacustris_contig113.1041.1 vs. uniprot
Match: D7FYG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG6_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 9.220e-77
Identity = 134/180 (74.44%), Postives = 153/180 (85.00%), Query Frame = 0 
Query:   36 VERAWSWTKSTWQRWQERGPAPLKRVLKRRCFPVLVAVVLSMIVVFPAYWAMPRGGGGVDGNGGDGPKRLSVREWQAKYDLLSSKHSADAVRHRLKYDNLAGRHLELQAEYESLLKDYKDQQRINRASRSGAKTTPQESCSSKPDTLLGPAREALKLAEQSAYEYLSHFAEGFREDVHEI 215
            +E A SW +S WQRWQERGPA +KRV+K+R FPVLVAV LS+++V PAYWA+PRGGGG D    DGP+RLS R+WQA+YDLLSSK SAD VR RLKYD+LAGRHLELQAEYESLLKDYK QQR NRA RS  KT P E+CS K +++LGPA+EALKLAEQSAYEYLSHFAEG REDVHE+
Sbjct:   21 LEAACSWVRSAWQRWQERGPASVKRVVKKRFFPVLVAVALSLLLVLPAYWAIPRGGGGND----DGPERLSARQWQAEYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRA-RSLPKTPP-ETCS-KSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEV 193
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BLAST of mRNA_P-lacustris_contig113.1041.1 vs. uniprot
Match: A0A6H5L9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9R2_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 2.050e-71
Identity = 128/184 (69.57%), Postives = 150/184 (81.52%), Query Frame = 0 
Query:   36 VERAWSWTKSTWQRWQERGPAPLKRVLKRRCFPVLVAVVLSMIVVFPAYWAMPRGGGGVDGNGGDGPKRLSVREWQAKYDLLSSKHSADAVRHRLKYDNLAGRHLELQAEYESLLKDYKDQQRINRASRSGAKTTPQESCSSKPDTLLGPAREALKLAEQSAYEYLSHFAEGFREDVHEIAGCY 219
            +E   SW +S W+RWQERG A +KRV+K+R FPVLVAV LS+++V PAYW +PRGG   DG   DGP+RLSVR+WQAKYDLLSSK SAD VR RLKYD+LAGRHLELQAEYESLLKDYK QQR NRA RS  KT P E+CS K +++LGPA+EALK  EQSAYEYLSHFA+G R+DVHE+ G +
Sbjct:  161 LEAMCSWVRSAWRRWQERGLASVKRVVKKRFFPVLVAVALSLLLVLPAYWTIPRGG---DGGNDDGPERLSVRQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRA-RSLPKTPP-ETCS-KSESVLGPAKEALKFVEQSAYEYLSHFADGLRQDVHEVKGLF 338
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig113.1041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYG6_ECTSI9.220e-7774.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L9R2_9PHAE2.050e-7169.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availablePANTHERPTHR10825RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENTcoord: 45..435
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..597
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 11..30
NoneNo IPR availableTMHMMTMhelixcoord: 66..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig113contigP-lacustris_contig113:30165..34070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig113.1041.1mRNA_P-lacustris_contig113.1041.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig113 23197..35109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig113.1041.1 ID=prot_P-lacustris_contig113.1041.1|Name=mRNA_P-lacustris_contig113.1041.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=598bp
MHAHVRVVYEFVYVHALVIFEFFYSYAVVAVRETAVERAWSWTKSTWQRW
QERGPAPLKRVLKRRCFPVLVAVVLSMIVVFPAYWAMPRGGGGVDGNGGD
GPKRLSVREWQAKYDLLSSKHSADAVRHRLKYDNLAGRHLELQAEYESLL
KDYKDQQRINRASRSGAKTTPQESCSSKPDTLLGPAREALKLAEQSAYEY
LSHFAEGFREDVHEIAGCYLGGRDRSGGGGVGVELHDVMSRRGKEEDNTM
NRHQSESAKEVNVKTKKKSKDKASKGGKGEEKAMQQQSQSAKEVNVKTKK
KSKDKASTGGKGEENATKRPQSESAKEVNVKTKRSKDKTSTGGKVENAVK
RPQAESAKEFNVKTKRSKDKASKGGKKSEDKSNDESEDKSKDISKDKSKD
KSKNKSKDKSKVKSKAIPMDNSNGKSKDNSKDNSKDISKEISKDKSKDKS
KDKSKDKSKDKSKDKSKDKSKDKSKDKSKDKSKDISKDNSKKTSEEKSKD
ISMNKSKDISKDKSKDKSKDNSKKTSKERSKDKSKDKPKDKSKEKSWGIT
MDTTAKGTKSEATVSWAGEEDKIVPKGNDHIPVSLYRRALDKEGGRS*
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