mRNA_P-lacustris_contig113.1041.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-lacustris_contig113.1041.1
Unique Name	mRNA_P-lacustris_contig113.1041.1
Type	mRNA
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)

Homology

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BLAST of mRNA_P-lacustris_contig113.1041.1 vs. uniprot
Match: A0A6H5L9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9R2_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.670e-92
Identity = 205/344 (59.59%), Postives = 240/344 (69.77%), Query Frame = 1

Query:    1 VGGRSATPDESDARVVPVGDEGFVVVDDDGLSLPESGGGDTGQDAAPFSPGAFPALEASLSTRVTSTSPTVVSSSSSCTTQPNGSPXXXXXSASGGEQVAAAAATADLVYRTLCAYAVVANKFMHAHVRXXXXXXXXXXXXXXXXXXXXXVVAVRETA--VERAWSWTKSTWQRWQERGPAPLKRVLKRRCFPVLVAVVLSMIVVFPAYWAMPRGGGGVDGNGGDGPKRLSVREWQAKYDLLSSKHSADAVRHRLKYDNLAGRHLELQAEYESLLKDYKDQQRINRASRSGAKTTPQESCSSKPDTLLGPAREALKLAEQSAYEYLSHFAEGFREDVHEIAGCY 1026
            +GG        D R +P G+E FVVVDDDGL+L +SG    GQDAAPFSPGAFPAL ASLS  V    P+  +  S     P+        +A       A  A  DLVY+ LCAY++           XXXXXXXXXXXXXXXXXXXXX VA+ E    +E   SW +S W+RWQERG A +KRV+K+R FPVLVAV LS+++V PAYW +PRGG   DG   DGP+RLSVR+WQAKYDLLSSK SAD VR RLKYD+LAGRHLELQAEYESLLKDYK QQR NRA RS  KT P E+CS K +++LGPA+EALK  EQSAYEYLSHFA+G R+DVHE+ G +
Sbjct:    1 MGGERTQSGTGDTRAIPQGEEEFVVVDDDGLNLQDSGAEPAGQDAAPFSPGAFPALGASLSAGVAFAPPSSTTQQSQNPRMPSTDAAAVGAAAPXXXXXGAVVAALDLVYKALCAYSIAGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALHEALGLLEAMCSWVRSAWRRWQERGLASVKRVVKKRFFPVLVAVALSLLLVLPAYWTIPRGG---DGGNDDGPERLSVRQWQAKYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRA-RSLPKTPP-ETCS-KSESVLGPAKEALKFVEQSAYEYLSHFADGLRQDVHEVKGLF 338

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BLAST of mRNA_P-lacustris_contig113.1041.1 vs. uniprot
Match: D7FYG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG6_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.780e-73
Identity = 134/180 (74.44%), Postives = 153/180 (85.00%), Query Frame = 1

Query:  475 VERAWSWTKSTWQRWQERGPAPLKRVLKRRCFPVLVAVVLSMIVVFPAYWAMPRGGGGVDGNGGDGPKRLSVREWQAKYDLLSSKHSADAVRHRLKYDNLAGRHLELQAEYESLLKDYKDQQRINRASRSGAKTTPQESCSSKPDTLLGPAREALKLAEQSAYEYLSHFAEGFREDVHEI 1014
            +E A SW +S WQRWQERGPA +KRV+K+R FPVLVAV LS+++V PAYWA+PRGGGG D    DGP+RLS R+WQA+YDLLSSK SAD VR RLKYD+LAGRHLELQAEYESLLKDYK QQR NRA RS  KT P E+CS K +++LGPA+EALKLAEQSAYEYLSHFAEG REDVHE+
Sbjct:   21 LEAACSWVRSAWQRWQERGPASVKRVVKKRFFPVLVAVALSLLLVLPAYWAIPRGGGGND----DGPERLSARQWQAEYDLLSSKFSADTVRQRLKYDSLAGRHLELQAEYESLLKDYKIQQRANRA-RSLPKTPP-ETCS-KSESVLGPAKEALKLAEQSAYEYLSHFAEGLREDVHEV 193

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig113.1041.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig113.1041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L9R2_9PHAE	1.670e-92	59.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FYG6_ECTSI	1.780e-73	74.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig113	contig	P-lacustris_contig113:23197..35109 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	signal anchor
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-19_001090.1
Exons	5
Model size	3202
Cds size	1794
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815431.4379277-UTR-P-lacustris_contig113:23196..23366	1622815431.4379277-UTR-P-lacustris_contig113:23196..23366	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig113 23197..23366 +
1693493537.4195905-UTR-P-lacustris_contig113:23196..23366	1693493537.4195905-UTR-P-lacustris_contig113:23196..23366	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig113 23197..23366 +
1622815431.448368-UTR-P-lacustris_contig113:29965..30164	1622815431.448368-UTR-P-lacustris_contig113:29965..30164	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig113 29966..30164 +
1693493537.4334538-UTR-P-lacustris_contig113:29965..30164	1693493537.4334538-UTR-P-lacustris_contig113:29965..30164	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig113 29966..30164 +
1622815431.5058937-UTR-P-lacustris_contig113:34070..35109	1622815431.5058937-UTR-P-lacustris_contig113:34070..35109	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig113 34071..35109 +
1693493537.479504-UTR-P-lacustris_contig113:34070..35109	1693493537.479504-UTR-P-lacustris_contig113:34070..35109	Pleurocladia lacustris SAG_25_93	UTR	P-lacustris_contig113 34071..35109 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815431.460192-CDS-P-lacustris_contig113:30164..30497	1622815431.460192-CDS-P-lacustris_contig113:30164..30497	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig113 30165..30497 +
1693493537.445062-CDS-P-lacustris_contig113:30164..30497	1693493537.445062-CDS-P-lacustris_contig113:30164..30497	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig113 30165..30497 +
1622815431.4704618-CDS-P-lacustris_contig113:30693..30864	1622815431.4704618-CDS-P-lacustris_contig113:30693..30864	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig113 30694..30864 +
1693493537.4545236-CDS-P-lacustris_contig113:30693..30864	1693493537.4545236-CDS-P-lacustris_contig113:30693..30864	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig113 30694..30864 +
1622815431.4808888-CDS-P-lacustris_contig113:31559..31697	1622815431.4808888-CDS-P-lacustris_contig113:31559..31697	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig113 31560..31697 +
1693493537.464597-CDS-P-lacustris_contig113:31559..31697	1693493537.464597-CDS-P-lacustris_contig113:31559..31697	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig113 31560..31697 +
1622815431.4921105-CDS-P-lacustris_contig113:32918..34070	1622815431.4921105-CDS-P-lacustris_contig113:32918..34070	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig113 32919..34070 +
1693493537.4722772-CDS-P-lacustris_contig113:32918..34070	1693493537.4722772-CDS-P-lacustris_contig113:32918..34070	Pleurocladia lacustris SAG_25_93	CDS	P-lacustris_contig113 32919..34070 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig113.1041.1	prot_P-lacustris_contig113.1041.1	Pleurocladia lacustris SAG_25_93	polypeptide	P-lacustris_contig113 30165..34070 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-lacustris_contig113:23197..35109+
coding sequence from alignment at P-lacustris_contig113:23197..35109+

protein sequence of mRNA_P-lacustris_contig113.1041.1

>prot_P-lacustris_contig113.1041.1 ID=prot_P-lacustris_contig113.1041.1|Name=mRNA_P-lacustris_contig113.1041.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=598bp
MHAHVRVVYEFVYVHALVIFEFFYSYAVVAVRETAVERAWSWTKSTWQRW
QERGPAPLKRVLKRRCFPVLVAVVLSMIVVFPAYWAMPRGGGGVDGNGGD
GPKRLSVREWQAKYDLLSSKHSADAVRHRLKYDNLAGRHLELQAEYESLL
KDYKDQQRINRASRSGAKTTPQESCSSKPDTLLGPAREALKLAEQSAYEY
LSHFAEGFREDVHEIAGCYLGGRDRSGGGGVGVELHDVMSRRGKEEDNTM
NRHQSESAKEVNVKTKKKSKDKASKGGKGEEKAMQQQSQSAKEVNVKTKK
KSKDKASTGGKGEENATKRPQSESAKEVNVKTKRSKDKTSTGGKVENAVK
RPQAESAKEFNVKTKRSKDKASKGGKKSEDKSNDESEDKSKDISKDKSKD
KSKNKSKDKSKVKSKAIPMDNSNGKSKDNSKDNSKDISKEISKDKSKDKS
KDKSKDKSKDKSKDKSKDKSKDKSKDKSKDKSKDISKDNSKKTSEEKSKD
ISMNKSKDISKDKSKDKSKDNSKKTSKERSKDKSKDKPKDKSKEKSWGIT
MDTTAKGTKSEATVSWAGEEDKIVPKGNDHIPVSLYRRALDKEGGRS*

mRNA from alignment at P-lacustris_contig113:23197..35109+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-lacustris_contig113.1041.1 ID=mRNA_P-lacustris_contig113.1041.1|Name=mRNA_P-lacustris_contig113.1041.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=11913bp|location=Sequence derived from alignment at P-lacustris_contig113:23197..35109+ (Pleurocladia lacustris SAG_25_93)
GTAGGAGGACGGAGTGCTACTCCCGATGAAAGTGATGCTCGTGTCGTTCC
CGTCGGCGACGAGGGCTTCGTTGTGGTCGACGACGATGGACTGAGCCTAC
CTGAGAGCGGGGGCGGCGACACAGGACAAGACGCTGCGCCGTTTTCTCCG
GGAGCGTTTCCAGCCCTCGAGTGAGTCTTCAACGTGGGACCACACCTATT
GCTTGATTTTGGTGGAGCTAGGTGCGTGTTTCAGTCTTCTATGTGTTTTT
TTGTCCGCCCTCCGCATACTTCAACTCGACCTTTTTAAAAGTGGGGGGCC
AAGGCAAAGGTCGGCACATCTACGCAACCACGGGACTGGACTGCATGTTA
CGGCAGACACTCCCCCTCCCTCATCTTCTCTCCTGCTCACGCTTGCTTTC
GTCTCCGTGCGGGTCAGAGCTCGTAAAACAGTCTCTCGGTGTTAGAACAT
TCTACCATTCGTGATGAAAAGATTTGAAGTACCGCTTCGAAAGAGTTTTT
TTTTCTGTCGATGTGTGCCACATACAGTAGGCTTTTTTTCGGAAACGCCC
AAGCGAACAAGAGCCAATTATGTTAAGTACTTACTACTCTGCGTTTTTTT
CTCAGGTGTGCATCAACTTTGCGCGCCATTTTCCACCTGTTTCTGAGGCA
ATTCTGCGGGTATTGATGGTATATGTCCCTCCTATGCGTATTCGTGTCGA
GGTTTTACGCTCCTACATCTGATTCCTTCTGTTTGTTGTAGTTTCCCATC
ACCGTTCATGCCAGCTTTTTCAAGTGTAGCGACCCAAAAGGAAGTGTGAA
GGCCGACGACATTAGACATTAGACATTAGGCAGCATGTCACGCGCTGCCC
CCTACGCGAAAGCTGTCGCCCCTCGTCCCTATCCCTTATCCCTGATTAAC
TGATCAGCTGCAACACTACAACACGAACACATAAACCACCCTTGAACCTT
GAACAATCAAACCAAAGAGTGGAAGAAGAATCTGACAGCACGGCATCTCC
TTTATCCATGCTTTCACAATTCTATTTTCTTCGTCCTCTGTTGTACTTGA
GGAGGGCGGATGCGGCGATGCGGTCGCTGAAACTCGACTCCTGTCTCTCG
TCCATGCAAGCACGCAAGATAGAAAACTAACGTTTCATGAACGCGGAGGA
CGGCTGAATCAAGGCGATATCCTTCGCTACACCGTATGGGGAAGCCTACG
TTTGTTGTCGCGCCAGAATTCCCACAAGTCGTATCCGGCGTCCACCGCAG
AAGGCGCGATGTAGTACTCGTCCTTCTCTAGCACCAGGTTACCGATCACT
CCAGTCGTAACAAAGGAAAACGGATCCAAGAGCAGGTTGATGTCGTCAAT
GGACAATTAATGCTGCTTGACGAAGTGGAAGTTCAGGAGTCTCGCAGCCT
GGTACATTTGGATACTCTCGCGTTGCTCGGCTTCTTCGTGTCCCCCGATC
CTTTCCCAGCTGACGGCATGCAGGAATTCGCAGTTGCTACTGCCATTGGG
CTTTCATTGCATCCTGTCACCATCAACGCCGAGACACTGGGAGCAGTGGA
GGGGAAGGAAGAATGCGAGATGACTTGTACGTACATTCTTAATTTTGAGG
CGGCCACCTGCCGAATGTCCTCGGCGTACGACAGTTGTCAACTCACGTTG
TCTTTGCATATTCGCGGAGCAGGGCGTTGACGTTGGGCAGGTGGGGAGAG
CCGAAGGCGCCGTCGATCCCCCGCTCCAGGGCAAGCCCCATGTGCACTCT
GGTGACGGCATCATACGCCAAGGGTAGCTGTTGAAAGCAGAGGCAGGAGC
ACAAGAGCAGAAGGTGTGCGGTGTGCGGTAAGGGGTACGGAGAAAGCAAT
AAAAAGGTCACTCCGTGGTCACGAGCCCAAGCGAGGGCGGAGGGGGGAGA
GGGAAGAGGACTGGATGACCCGAACAAGTGCAAATCTCGGGGAAGGGGTG
GACAAGGACATATTTACCAGCGTCTCATCTCCCTCCAGCAGGTATACAAC
GAGCGCGAACTCCAGCTGCTGCACGACGAATTCTTGGGGATGCCGTCCTC
TCGCACCCTCGCGAACTCCTCCCGACAGAACCTGACCTTGGCGGATTTAG
TCTCGTCACTTGTACTGAAAACGTCGATGAACGTCTTCATCTCTTGCCAG
GCCGTCACCAACACGTTTTCCGCTCGAACGCTGAAGTCCGGTGGTGAGAA
GGATTTTTCGGGCGCGACGTCTTGGTCACAGCCCGCCACTGTTCCGAGGC
GTTGTAGCTGTAGGAGAAGACCGTGTGCATCGCGCCGGCACACGTGTCGA
ACTTGTTCCTTTTGATCTTGTCGCCGGCGTTGTTGAAGAGGTGGGACGCG
CAGCGGCTACCCACAGCATCCGCGCAATGCGTCAACAACGTGTCGAGTGC
TTTGAGGTTGGCTGCGCACCCGTCGAGCATGAAGCCGCGGCAACGCGTGG
AGTCAAACTTCAACTTCATGAACAGGACGTTGTGCACTTCCCCGAAGATG
GCCCTGAAGTCCATGCTCGTGGCCAGCATGCTCAGCAAAACAAGTCGTTG
ACACACCTACAGGCCCGCAAAAAAACATCGGTCAACAAACACCGAAAGAC
GAAATGAAACATTTGATTCTGAAAAAAATAAGAGCACATGGCTGGAATAG
CTCAACGTCAACAAGCGGCAACCCAACACTGACCATATGAGACCAAACAA
ACTCGAAGCACTCGCCCTTTGGAACGGCCATAGAACCCCTTATCCCTTCT
CACCTTTCCGTCCGGACCAACGAATCGGATACCAACGCCAAAGCACTCGC
AGCGGTACAGGTTCCGTCGAAAACCACGGTGTAGCTGCCGTCGCCAAGCT
CTTTCAGAATCGTCTGCCCCTCGGTCATCAGCGAGAGTTGGGAGTTGTGC
GGCGCCAGTGTTAACGAGTTGTACTGGAAACAGCGGTAGAGCCCCAACGC
TGGGTGGAGCGGAATGTTACTGGTACTGTGATTTGATGTTTCCCTTAAAT
CTGACCCACAAATGACGCACGATGCACATGTCGTGGCATTACCTCATCGT
GAATGAATAAAAGGAATCTGGTTTCGGAGGTGTGTTGATGGCAGCTTCAC
TCCGAAGTGGGCGAACACCTCTTTCATGTTCGGGTTGTCGAGGGCATAAA
GTGCTCTTCCTGCTGAAAGGCACCCCTTCGTCAGAGCAGCAGCTGGCCCG
TAAGCTCCGCGGGGGAAAGGGTTTATCCATAGGCGCGTCCGTTGGCCGCA
GAATATTCCTTGAAATTGAGCAGCGACTCCTTCAGACATGAGAAATCAAG
TACACACAAAGACCACGAATCCACGGCAAAGGGTAGAGAAAAAGGGTATG
TTGGGCGACTTGCTACTGTAGAAGATACGACGAGCAGAAAAAAATGCTAC
ACTTTTGTATTGGTGCACATACATAGAGGTAAATAAGATTAACGCAAACT
TTTTTTTATTTTCAACCTGAATTTAGTGTGGCTCTCGAGCCCTGAGAGCT
CAGCATTTCGGGGTTATCTCATCTCCCAAAGCTGCACTCTCAGATCAGCA
TGATTTTTCAGCGCTCTCGCACGAGGCCCAGAGGTTTCGCTTCGGCGCGG
GACCGTTAAGAGTCGGCGCGCTGATTGGCGTCTCCGAAAAGGTTCTGGAA
CCCATCTCTATCAAGACGCTGACGCGCACCCTGAATGATGAAACACACAC
ACGCAAATTGCCCGTGCACCAGCCACACTCCCTCCCTCCACCCCCCCGAT
CGTGGTAATCAGCGAGATGAACACCATGTCACAGACGCTGACGCGCACCC
TGGCGTCTCCGAACTTTTGTTCGCCAAAAGGTTCGCCTGGCGGGAAAAAT
ATTGGCCCGTAAAATTGACCCGCTTCCCGCGTTGAAGTTGTGTTAACGAC
AAAGACAGCAACAGCCAGATCACTGCCACACGCACACGCGCACGTCGTGA
TGTGAAGCGCTCGCTTTGTGTGCACACTACACATCAGTCAGCGACAGACG
CTGATACGTACACGTCGTACTGTGAAGCGCTACCATCGCAAGAAAGGGAT
GTCAAACTCAAGCAAATGTCTGAGGTCGAAGAATTCTTTCGAGATTTCCC
TGAAAAAAAGACTCCATTTTTTTTTTTGAAAGCTAACTTCATCACGGGTA
TCTTTCGTTCCGTACCCGGAAGCGACAATGTGGGTTTGTTGTGCGCCGCA
GGATATATATATAGTCTCACAATGTGTGCGAAGACAAATATCTCCTAAAT
TCATTCACCGTTCCCACCCTGGTCTTCCACGTGTTTTTGCACACGTCAAC
AGTACAACAAGCTATAATATTATCGTGACCCCCGTTTTTAGCCTCCGTTT
GCAAAACGTTCCACTTGGTATAAGAGCTTGAACGTTTCACGTCCACCTTA
TTTTAACTTCATGGGTCACATCTATGTAGACCTTATAGTCTCAAGGGCGT
AGGATGGGGGCGGAGCCCCCACATCCGGAGGCCTTGTATATCTGAAGATT
GTATGTACCAAGCACCACCATGGTCATTTTTCAGGATAAGAAATGCGTAC
CAATAAAAAAGAAAAAAAGGCGCGCAGCACAACCTACCCAGCACACCCTC
ACGCTTTTCACCAGAAGAAAAAAAAGAGAAGTAGGAAAAAGGGGGAAATA
TGTAAATGCTGCTGGCTGCTGGCTGCTACGGCTGCTGCTGCATAAATAAA
AAAAAACAAATGTCGAAAATAAAAAAATACGGAGTAAAAAATGTCAAGAG
ATTCAAAAATCAAACGCACCTGCTTTTCTTTGTGTGACTTGCAGAAGACC
TCCACTTTTTGCTGGTGTGCCTTCCCGTTGCAGTGGGTCCTGATCGCGTG
CTTTACCTTTAAAGCAGGCCTCCAACCGCAGCCCTCGCGAAGGACCTTGC
CTTTTTCCGCGATCAGCTTCTGGGTTGGGAACGACTTCACGCGATCGGCG
GCGGAGATGGTCTTACAACCGCTGCCGTTTGCGCCCTTTCGCCTCGGCGC
GCGCGCGGTTTCTTCTTCCTCTTGGATCTCGCACTGACCAGGCTCCTCCT
CGTCGCCCCCTTCCTCTTCCTCTTTCTCTTCCTCGTCCTTCTCGTCTCCT
TCGCGACCGCGTTTCAGCCGGTCCTCGTGGCGCCTCACAACCCTGGCTCT
ATCAATGTGATCTGCTCGGGGTGGTGCGGTGGGGTTGGTATCAGCATCTT
CATTTTCTCTACGCCGCTGTATGTCTCTCCTCTCTCAGCCTTCAGCTGTC
GCGTAGGGGCTGGTTTGGAAATGAAGGCCCCTATGCCCGGTTGGTCTGAG
CGGACTTTAGGTGCGGCACCCGCAGCAGCAGCAGCAGCTGTAGGCTTGGC
CTTGACGTGTTTACTTGTAGTCCATCGTCAGGCTCGTCTGCAGCACTAGA
GTCAGAGCTGTCGTGGGCGACAAGTGCCTTGTGGGTGCTTGCTATCGCCA
AAGATCGCAGGTACGCAGTCGCGATTACTGACTGCTGATAACTGCTCGCC
TGCCGCCTGCTGTCTGGTCTGCGGTCTGTCGGCACGTAACACGTGTGTGT
TTTAGTTGAAAATCATTGTCGGTGAGTGACCGGAGTTTTAAGTGCAAGTG
TGTTGTTTTATTTTCTTCTTGTGTTTATTTCGTGCCAGGGCTTGGTTGCA
GCTGTCCTCATCCCCAAACACGGCGTGGCACACCTTGTTTATGCGAATTT
CCGCTTGTTCTGTCACCCCCGTTGCGCAAAATCCCATTCCTATTGCTGCT
TGTAGCCTATGCGTCTGCTTATGCGCGTGAGGGCCATGTATGCCGAAAAC
TGTGCGCGCTTAATGGGTCCAGCCCTAGTGCTACACGTGGGGGCCAGCAA
ACCCCGTATTCTTCTTTTTTGCCGTTTCAATGGCTTCTTCGCTTACAAGG
GCTGCCAGGCCTATGCCATCAAGCTGTTGTCACGCCCCTCCCTGAGAGTA
TACTCCTATATACTCCGTATATATTAGCTGACTGACATGGGGGGGCAAGG
GGGGTACCTCGCGATCCTGATGATGAAACAATGTGGTGCTTCTCCACAAG
CTCGCCTTTGCCAGGTCCTTGTAACCCTATTCCCGTGCGTGACGAAAGCG
CGCTTCCCAAGCTCCTGACACGTGGGGCTAAGGCACGTAGAGGAAAAACA
AAACTACACAGGCATGTACGTGGCTTGGCGACAGGGATGGACAAAAACTC
CCGAAGACTAGAGAGAATGAAATCCTGTGTACACCTTGGCCCGTGATAAA
TGTGCCACTGCATCGACGCCTCTCCCCCCTCCCTGGCCCCGTGCCGCGGT
TCACCATCTCACCTTGATCGCTGTCGAACAGATGTGCCGTGACAGCAGCT
TCTCACCGATATGTTAACGAAGCGCTTCGCTCGCGACGTCTCTCGACGAG
CGCCTCTCAACGAGCGTCTTTCGAACACAATTATTGCCTTAGTGCAAAAA
GCAACACCGATGAGGTAGTGTAAGGGATAAGGGTGTAGTTTGTTGTTGCC
GAATACCAGCGACGGGTTTCCTACTCAAGACACCCGTACGCTGTGAGCAC
CTAACAGTTGTCCATCCCTCCCTCGTGTCGGTTTCCTGGTTTCCCCCTGA
TCGCGTTTCTTCGTCTGCCCTATCATAAACGAAGTTCCGTGCTCCCACTC
GAGATACCTGCGCCCACTACTCAACCCTTACTCCACGGCCACCTCCGGCG
TAGTTCGACGCACAAATTAATGTGCCCTCCTCCTCCCCCCGCCCCCTCGT
GCACGCGATGTTCTGGCAGGGCGAGTCTCTCCACGCGCGTGACCTCCACA
TCACCGACGGTGGTGTCGTCGTCGTCATCGTGCACCACGCAGCCGAACGG
AAGCCCTAGCACGGCCCCCAATTCCGCTTCCGGGGGCGAACAAGTTGCTG
CTGCTGCAGCCACCGCGGATCTGGTCTACAGGACCCTCTGCGCCTACGCT
GTCGTGGCGAACAAATTTATGCACGCTCACGTCCGCGTGGTGTACGAGTT
TGTCTACGTCCACGCCCTGGTAATTTTCGAGTTTTTCTACTCATACGCCG
TGGTCGCGGTGCGCGAGACTGCGGTGGAGAGGGCGTGGTCGTGGACCAAG
TCGACGTGGCAGAGGTGGCAGGAGCGTGGCCCGGCTCCGTTGAAGCGCGT
GTTGAAGCGCAGGTGTTTCCCGGTGCTGGTGGCAGTAGTACTGTCCATGA
TCGTTGTTTTCCCGGCCTACTGGGCGATGCCGCGCGGAGGTGGCGGTGTT
GATGGGAATGGCGGCGACGGTCCGAAGAGGCTGTCGGTCCGCGAGTGGCA
GGTTAGTGACCCAAGGCCCAACCTCGCAGCATCATCTGTTCTAATCCAAC
CCTTCTCGCGGGTACAACTTTGGTTTCACCCGTCAATGGGTGTAGGCTAA
CTCCCGACCCCGTGTATTGTTGGTTAAAGCTCATAGCGACAAGAGTTGTT
TTCCGTCGTGATATCGTGGTGCCTACTGTTTCGTCATCACAATATAGGCC
AAGTACGATCTGCTGAGCAGCAAGCACAGCGCCGATGCCGTGCGTCATCG
TCTCAAGTACGACAACCTCGCGGGTAGGCACTTGGAGCTGCAGGCCGAGT
ATGAATCCCTCCTGAAGGACTACAAAGACCAACAGAGAATCAATCGGGCC
AGTCGCAGCGGGGCGAAGGTGAGCACGCCAAGACAGCGAGGATGACCATG
ACAAAGGTAGTTCCACCAAGGCTTTACGAGCGCCCTTCAGCGTAGGACTG
TCAGCAGGATACCTAGGCGACAGACACCGTATCGGATACTTTGCGGCAAA
GCGAACAGACGAAAGCACAACGCTCGGAGAATTTGTGTGACTGTTTTCCG
TATGTTTTGCGCAGACGAGGGGGTAGGATGCGGGGGAGAGGAAGAGGACC
TGTTCGACGTCCTTGAAACCTGTTCGACGTCAACGAACAAGGACACAGAT
TGCGTTTCTCTGTCGAGCTGAAACTGTAAGGAGCACTTGACAGAGCAGGG
AGGTGACCATATACCTGATGGGCGTGACTTGGGGCTGAGGTTTAGGCTGT
TACTTGGTGAGGTTTAGGTTGTTACTTGGTGACCATGATGGCCATCGTTC
CGAACATGAGTTGAGAGGCCCGGTAGGCATCACAGCCGAAATAGGGCTCG
CTTTGCGAGGTAGCATCTACACCACGGAATCCCGGAGTTGATATCCTCTA
ATCCAACATGCGGGATCGACTCAACAGATACGTGGGAGTTTGGTTATTCG
CCAAACAGCTGGCCTAGGTCTATGGTCCATAAAGCTCGTTCCTCTGTACC
TCACCGCCCCTGATGACCGCTTTCTCCGACCCCACCTCTACTCCAAACCG
ATCCATCCTTTAGACAACACCCCAAGAGTCATGCAGCAGCAAGCCGGACA
CGTTGCTGGGTCCCGCGAGGGAAGCGCTCAAACTTGCGGAACAGTCGGCG
TACGAGTACCTCAGCCATTTCGCGGAGGGCTTTCGCGAGGACGTGCACGA
GGTAAGTTACGAAATGACACGATCCGATTGCACGCTGAACGCCCCCTCGA
ATCATGGGTTCCTGAACAAGGATTTGTGTCTCGTCGTTGGTTCTTGTGCA
TCAATGTAGCGCCGTCCCTAATACTGTGTGTTCACCGCCGTACACGGAAA
TTCGTTTGTAGATATGATTGACCCTGCCTTCCTGCATATTGTTCCTTCTG
AAAATGTATCCCGTGTTGTTCCTGCGGAGACGTAGTCCATACATTTAGGG
GAAACAAGTTGTCCACAGAACCACGTTGCCAAGACGGTCGCTCATCTCGC
CCATGGGGTAGTCGCAACCATCTCTGTTTTTTTTTTTCCGAGTCTGTTGT
GGATGCACAAGCTTTTGAGTTGAAGGCTCGAAAGAGCCGACATGTCGCTG
ATACCGCAGTAGGACAAGGCAGAGCAGTGCGCGGTAGACTAGACCACGAC
TGAGCCGCTCACGAATTTGGCATTTTGCTGTCCAAACGAATACGGAGTAC
TCGTTCTCTTCACGATGCTGGAAATTTTGAGACGTAATTGTTGTTTTACA
TCCTCGGCCATGCACCCAGACGTTCTTGTGAAAATATTCAAGGCAGACGG
CTGCCCGGACCCTCCCAAACCCGACATCGTTTCTAATGAGTTGGGTAACT
GTTAATGAGTTGGTAGTGCGGTTTTACCGCAATCCCTCTGAGCTAACCTC
GGGATTTGAGGATCCCCCTGACATGATGCGACCCCCGCGGGCCACAATTT
CAAATTCTTGACAATATGCCATCTAGGGGTATTGCGTCCTCTCTCCGGTG
TAGCTCAGGGGAGATTCACTCTAGGACGATGTTTGAGCGTTTTGTGTCGT
TTTTTGCAAGTCTTTCATGCTTCACTTCTTGGAGTCGGGGTCAAGGCCTG
GAGCAGTTTGCTGATCGTGTCGAGTTAGGGGTAGGCGTGCTTGAGTCATA
TTCGTGCCGGAGACAGTAGTTGTTTTTTCTTGGCCTTCTGGCGTCTCATC
GTGGCACGTACGGAATCCAGTGCCGTGTGATATTTCGGATAGTGGCGGAT
AGTCGGTATTTTGCCTGCGGGACCAAGCCGGGGTTTTGTGACTCGCTTGG
TTGACCCGCTGGCTATGAGCTGCCACTGGCCGGCTGACCAGACAAGCACT
GCGTGGTCGGAGTTAAGCAAGCAGAAGAACGCAACGTGCAACGACGCCGC
CCTGCCACCATATGTCCTGCAGATCGCGGGATGCTATCTCGGCGGCAGGG
ATCGTAGCGGCGGCGGCGGGGTTGGCGTAGAGCTGCACGATGTCATGTCT
AGGCGCGGCAAGGAGGAAGATAATACCATGAATCGGCATCAGTCAGAGTC
GGCGAAGGAAGTCAATGTCAAGACAAAGAAGAAATCAAAGGACAAGGCGT
CTAAGGGCGGCAAGGGGGAAGAGAAAGCTATGCAGCAGCAGTCACAGTCG
GCGAAGGAGGTCAACGTCAAGACAAAAAAGAAATCAAAGGACAAAGCGTC
TACGGGAGGCAAGGGGGAAGAGAATGCCACGAAGAGGCCGCAGTCAGAGT
CGGCGAAGGAGGTCAATGTCAAGACAAAGAGGTCAAAGGACAAGACGTCG
ACGGGAGGCAAGGTAGAAAATGCCGTGAAGCGGCCGCAGGCAGAGTCGGC
GAAGGAGTTCAACGTCAAGACAAAGAGGTCAAAGGACAAAGCTTCTAAGG
GCGGCAAGAAATCCGAGGACAAGTCCAACGACGAATCCGAGGACAAGTCC
AAGGACATATCTAAGGACAAGTCCAAGGACAAATCCAAGAACAAGTCCAA
GGACAAATCCAAGGTCAAGTCCAAGGCAATACCCATGGACAACTCCAACG
GCAAATCCAAGGACAACTCCAAGGACAACTCCAAGGACATATCCAAGGAG
ATATCCAAGGACAAATCCAAGGACAAGTCCAAGGACAAGTCCAAGGACAA
GTCCAAGGACAAGTCCAAGGACAAATCCAAGGACAAGTCCAAGGACAAAT
CCAAGGACAAATCCAAGGACAAATCCAAGGACATATCCAAGGACAACTCC
AAGAAAACGTCCGAGGAAAAATCCAAGGATATTTCCATGAACAAATCCAA
GGACATATCCAAGGACAAATCCAAGGACAAATCCAAGGACAACTCCAAGA
AAACGTCCAAGGAAAGGTCCAAAGACAAATCCAAGGACAAGCCCAAGGAC
AAATCTAAGGAAAAGTCATGGGGCATCACGATGGACACAACCGCAAAGGG
CACCAAGTCTGAGGCCACGGTGTCATGGGCGGGAGAAGAAGATAAAATAG
TACCCAAGGGCAACGATCACATCCCTGTGAGCCTATACCGTCGGGCCCTC
GACAAAGAGGGGGGCAGGTCGTAGATGCATTTGGGCATGACGACCATGTT
ATGGCAAATATCGGCAACAGGAGAAAGATTCGTGAGCGAGAACCGCGGGC
GCGTGTCCGCGGTCTGTGAGGACCCCCCGGTCCGGCGTCGTATCAACTGC
TTGTCTTCCTCAGAATGAGTGTTGTTGCCCGGCATTCTCACTCTGTGTCT
GTTGTACAAGTGCAGCGTTGACAGGGCAGTGTCCTTCGGAGCTCAGGCCC
AAATACGTTTTTTCGTCCATACGAAATAGAAGTAGTGTCTGCTGGGGGAA
CGGCCTCCTGTGTGTACCCCAGAACGGCGTTTTTGTTGTATAGTATATTT
TCAACTGCTGTACTTCTTTCTTCGCGTTTGCCCTTTTTTGTTGTAAATCT
TGGACGAATACCAGAGAGTGAGCCGTTGCAAGGAAGCGAGGCAGTATAGC
TGGTGTGTTAAATGCCGAGGAGGCGGCTCTGTAGTATGTAGAGGAACAAG
TTTACGTACCAGCTTGTTGAGGTTGTGATCTGTTTTTGCTGCGGGAAGCC
TGCATTGTATGAGTGCGTAGGCTGGCGTTCTGTTTTTTGTTTGATTTTTG
AGACTTCGCGTTTTGGCGCTTCCTGGAACGTCGTGGCGCAGATACATGTA
CAGTGTTTATTCCCAGGGTAGAGCGTTAACAGGCTGGAGGTCCGACGCGA
CTGGCCGGCCCCAGCTCCTTCCACCTCCACAGCCTCGATTGACTGGACAG
TGATTGTGCAGCGGCGGCAAAGTGTACCTGTCGCACTTCTGTATTTTGAT
GTTTTGAAGCACAGTGCTCCTACTATGCGAAGCATGCAGCCAGCTCGGGG
AAGACCATCCATGGCAGTCACTCTGCCAACCTCTGCATGCCTCAGTATTT
TCGTATTTTCCGTCGTCGAGAGGTGTGGGGTTGTCCTTCATATCTTTTTT
CGCACGGCACCTGCCTTTGTCACCGCGCTGCCTGTGTAACACGCTCAGTC
AGGCAGCGTCTATGTACTAAACCTTCTCTCGGCCGTGTCGCAAACTGGCC
TTTTCCTTTCCGC

Coding sequence (CDS) from alignment at P-lacustris_contig113:23197..35109+

>mRNA_P-lacustris_contig113.1041.1 ID=mRNA_P-lacustris_contig113.1041.1|Name=mRNA_P-lacustris_contig113.1041.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3588bp|location=Sequence derived from alignment at P-lacustris_contig113:23197..35109+ (Pleurocladia lacustris SAG_25_93)
ATGCACGCTCACGTCCGCGTGGTGTACGAGTTTGTCTACGTCCACGCCCT
GGTAATTTTCGAGTTTTTCTACTCATACGCCGTGGTCGCGGTGCGCGAGA
CTGCGGTGGAGAGGGCGTGGTCGTGGACCAAGTCGACGTGGCAGAGGTGG
CAGGAGCGTGGCCCGGCTCCGTTGAAGCGCGTGTTGAAGCGCAGGTGTTT
CCCGGTGCTGGTGGCAGTAGTACTGTCCATGATCGTTGTTTTCCCGGCCT
ACTGGGCGATGCCGCGCGGAGGTGGCGGTGTTGATGGGAATGGCGGCGAC
GGTCCGAAGAGGCTGTCGGTCCGCGAGTGGCAGATGCACGCTCACGTCCG
CGTGGTGTACGAGTTTGTCTACGTCCACGCCCTGGTAATTTTCGAGTTTT
TCTACTCATACGCCGTGGTCGCGGTGCGCGAGACTGCGGTGGAGAGGGCG
TGGTCGTGGACCAAGTCGACGTGGCAGAGGTGGCAGGAGCGTGGCCCGGC
TCCGTTGAAGCGCGTGTTGAAGCGCAGGTGTTTCCCGGTGCTGGTGGCAG
TAGTACTGTCCATGATCGTTGTTTTCCCGGCCTACTGGGCGATGCCGCGC
GGAGGTGGCGGTGTTGATGGGAATGGCGGCGACGGTCCGAAGAGGCTGTC
GGTCCGCGAGTGGCAGGCCAAGTACGATCTGCTGAGCAGCAAGCACAGCG
CCGATGCCGTGCGTCATCGTCTCAAGTACGACAACCTCGCGGGTAGGCAC
TTGGAGCTGCAGGCCGAGTATGAATCCCTCCTGAAGGACTACAAAGACCA
ACAGAGAATCAATCGGGCCAGTCGCAGCGGGGCGAAGGCCAAGTACGATC
TGCTGAGCAGCAAGCACAGCGCCGATGCCGTGCGTCATCGTCTCAAGTAC
GACAACCTCGCGGGTAGGCACTTGGAGCTGCAGGCCGAGTATGAATCCCT
CCTGAAGGACTACAAAGACCAACAGAGAATCAATCGGGCCAGTCGCAGCG
GGGCGAAGACAACACCCCAAGAGTCATGCAGCAGCAAGCCGGACACGTTG
CTGGGTCCCGCGAGGGAAGCGCTCAAACTTGCGGAACAGTCGGCGTACGA
GTACCTCAGCCATTTCGCGGAGGGCTTTCGCGAGGACGTGCACGAGACAA
CACCCCAAGAGTCATGCAGCAGCAAGCCGGACACGTTGCTGGGTCCCGCG
AGGGAAGCGCTCAAACTTGCGGAACAGTCGGCGTACGAGTACCTCAGCCA
TTTCGCGGAGGGCTTTCGCGAGGACGTGCACGAGATCGCGGGATGCTATC
TCGGCGGCAGGGATCGTAGCGGCGGCGGCGGGGTTGGCGTAGAGCTGCAC
GATGTCATGTCTAGGCGCGGCAAGGAGGAAGATAATACCATGAATCGGCA
TCAGTCAGAGTCGGCGAAGGAAGTCAATGTCAAGACAAAGAAGAAATCAA
AGGACAAGGCGTCTAAGGGCGGCAAGGGGGAAGAGAAAGCTATGCAGCAG
CAGTCACAGTCGGCGAAGGAGGTCAACGTCAAGACAAAAAAGAAATCAAA
GGACAAAGCGTCTACGGGAGGCAAGGGGGAAGAGAATGCCACGAAGAGGC
CGCAGTCAGAGTCGGCGAAGGAGGTCAATGTCAAGACAAAGAGGTCAAAG
GACAAGACGTCGACGGGAGGCAAGGTAGAAAATGCCGTGAAGCGGCCGCA
GGCAGAGTCGGCGAAGGAGTTCAACGTCAAGACAAAGAGGTCAAAGGACA
AAGCTTCTAAGGGCGGCAAGAAATCCGAGGACAAGTCCAACGACGAATCC
GAGGACAAGTCCAAGGACATATCTAAGGACAAGTCCAAGGACAAATCCAA
GAACAAGTCCAAGGACAAATCCAAGGTCAAGTCCAAGGCAATACCCATGG
ACAACTCCAACGGCAAATCCAAGGACAACTCCAAGGACAACTCCAAGGAC
ATATCCAAGGAGATATCCAAGGACAAATCCAAGGACAAGTCCAAGGACAA
GTCCAAGGACAAGTCCAAGGACAAGTCCAAGGACAAATCCAAGGACAAGT
CCAAGGACAAATCCAAGGACAAATCCAAGGACAAATCCAAGGACATATCC
AAGGACAACTCCAAGAAAACGTCCGAGGAAAAATCCAAGGATATTTCCAT
GAACAAATCCAAGGACATATCCAAGGACAAATCCAAGGACAAATCCAAGG
ACAACTCCAAGAAAACGTCCAAGGAAAGGTCCAAAGACAAATCCAAGGAC
AAGCCCAAGGACAAATCTAAGGAAAAGTCATGGGGCATCACGATGGACAC
AACCGCAAAGGGCACCAAGTCTGAGGCCACGGTGTCATGGGCGGGAGAAG
AAGATAAAATAGTACCCAAGGGCAACGATCACATCCCTGTGAGCCTATAC
CGTCGGGCCCTCGACAAAGAGGGGGGCAGGTCGTAGATCGCGGGATGCTA
TCTCGGCGGCAGGGATCGTAGCGGCGGCGGCGGGGTTGGCGTAGAGCTGC
ACGATGTCATGTCTAGGCGCGGCAAGGAGGAAGATAATACCATGAATCGG
CATCAGTCAGAGTCGGCGAAGGAAGTCAATGTCAAGACAAAGAAGAAATC
AAAGGACAAGGCGTCTAAGGGCGGCAAGGGGGAAGAGAAAGCTATGCAGC
AGCAGTCACAGTCGGCGAAGGAGGTCAACGTCAAGACAAAAAAGAAATCA
AAGGACAAAGCGTCTACGGGAGGCAAGGGGGAAGAGAATGCCACGAAGAG
GCCGCAGTCAGAGTCGGCGAAGGAGGTCAATGTCAAGACAAAGAGGTCAA
AGGACAAGACGTCGACGGGAGGCAAGGTAGAAAATGCCGTGAAGCGGCCG
CAGGCAGAGTCGGCGAAGGAGTTCAACGTCAAGACAAAGAGGTCAAAGGA
CAAAGCTTCTAAGGGCGGCAAGAAATCCGAGGACAAGTCCAACGACGAAT
CCGAGGACAAGTCCAAGGACATATCTAAGGACAAGTCCAAGGACAAATCC
AAGAACAAGTCCAAGGACAAATCCAAGGTCAAGTCCAAGGCAATACCCAT
GGACAACTCCAACGGCAAATCCAAGGACAACTCCAAGGACAACTCCAAGG
ACATATCCAAGGAGATATCCAAGGACAAATCCAAGGACAAGTCCAAGGAC
AAGTCCAAGGACAAGTCCAAGGACAAGTCCAAGGACAAATCCAAGGACAA
GTCCAAGGACAAATCCAAGGACAAATCCAAGGACAAATCCAAGGACATAT
CCAAGGACAACTCCAAGAAAACGTCCGAGGAAAAATCCAAGGATATTTCC
ATGAACAAATCCAAGGACATATCCAAGGACAAATCCAAGGACAAATCCAA
GGACAACTCCAAGAAAACGTCCAAGGAAAGGTCCAAAGACAAATCCAAGG
ACAAGCCCAAGGACAAATCTAAGGAAAAGTCATGGGGCATCACGATGGAC
ACAACCGCAAAGGGCACCAAGTCTGAGGCCACGGTGTCATGGGCGGGAGA
AGAAGATAAAATAGTACCCAAGGGCAACGATCACATCCCTGTGAGCCTAT
ACCGTCGGGCCCTCGACAAAGAGGGGGGCAGGTCGTAG