prot_P-lacustris_contig1123.1003.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1123.1003.1
Unique Nameprot_P-lacustris_contig1123.1003.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length300
Homology
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: D7FIT5_ECTSI (YihA3, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT5_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 2.430e-69
Identity = 133/212 (62.74%), Postives = 151/212 (71.23%), Query Frame = 0
Query:   66 PQQQH-PRPFSTDAAFGT-AIHNPNGGIGRRDQPRSTDKQSHGGSLAGERHPFGGTSLLPGDEEAGDRESLSPWGTDAEEDEEQEVIAVTRGRKERRDSVTESILKERERHLMRLAKSDVDQGMAKTFKGLSLGSRKRPRQAGGFNKAYDQTGKQVHSDFAAGGFARWMGSASKGWPTFKHQLPEVALAGHTNCGKSTLVNALSGIHPRRVP 275
            PQQ H  R FST AA G   +  P+  +G     RS   Q+ G   AGE+  F G     G+   G+ +  +                 TRGRKERRDSVT+SI+KERE+HL+RLAK++VD  MAKTFK  SLGSRKRPRQAGGFNKAYD+TGKQVHSDFAAGGFARWMGSASKGWPTF+H+LPEVALAGHTNCGKSTLVNALSGIHPRR P
Sbjct:   19 PQQHHLRRRFSTGAASGAIVVRTPSAHVGHG--RRSAHDQAQGDRTAGEK-TFSGIVRTEGEAWGGEGQPPAXXXXXXXXXXXXXXXXTTRGRKERRDSVTDSIVKEREQHLVRLAKAEVDTAMAKTFKASSLGSRKRPRQAGGFNKAYDRTGKQVHSDFAAGGFARWMGSASKGWPTFRHRLPEVALAGHTNCGKSTLVNALSGIHPRRGP 227          
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A836CEK3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK3_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.130e-29
Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 0
Query:  154 RGRKERRDSVTESILKERERHLMRLAKSDVDQGMAKTFKGLSLGSRKRPRQAGGFNKAYDQTGKQVHSDFAAGGFARWMGSASKGWPTFKHQLPEVALAGHTNCGKSTLVNALSGIHPRR 273
            R RKER DSV+++IL+ R  HL R+   +VD    +  + L LG RK+P     F K +    KQV +   AGGFA  +GSASK WP FKH LPEVALAGHTNCGKSTLVNAL+GIHPR+
Sbjct:   21 RARKERVDSVSDTILEARRLHLRRIRDFEVDPETVEQLRKLGLGRRKQPLDNRAFTKKW-LNNKQVATGMGAGGFAVHLGSASKDWPMFKHNLPEVALAGHTNCGKSTLVNALAGIHPRQ 139          
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A7S3M560_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M560_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.070e-20
Identity = 54/122 (44.26%), Postives = 76/122 (62.30%), Query Frame = 0
Query:  154 RGRKERRDSVTESILKERERHLMRLAKSDVDQGMAKTFKGLSLGSRKRPRQAGGFNKAYDQTGKQVHSDFAAGGFARWMGSASKGWPTFKHQLPEVALAGHTNCGKSTLVNALSGIHPRRVP 275
            RG +ERRDSVT  IL ER++H+ RL +   +Q + +  +   LGSR+R  Q       ++    +  ++  AGGFA  + S S+ WP FKH LPE+A AGH+N GKSTLVNA+ G+ P + P
Sbjct:   55 RGNRERRDSVTNEILWERQQHMKRLGRLPANQALVRALEDEGLGSRRRKHQVYSHITVHEPGVIKKKTNSGAGGFALHLTSTSRDWPIFKHLLPEIAFAGHSNSGKSTLVNAMIGVLPSKGP 176          
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A4D9CU55_9STRA (EngB-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU55_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 7.930e-13
Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 0
Query:  167 ILKERERHLMR---LAKSDVDQG----MAKTFKGLSLGSRKRPRQAGGFNKA-YDQTGKQVHSDFAAGGFARWMGSAS----KGWPTFKHQLPEVALAGHTNCGKSTLVNALSGIHPRR 273
            +L++R RHL R   LA+ D  +G    + +    L LG ++R +    + +   D T     S   A GFA +M +AS    +GWP FKH LPEVA AGH+NCGKS+LVNA++G+ PRR
Sbjct:    1 MLEDRRRHLARIAALAREDEAEGPDPEILRRINELGLGQKQRGKDTARYRRGPKDMTAGP--SQIGATGFATFMAAASGRGSEGWPFFKHMLPEVAFAGHSNCGKSSLVNAVAGMVPRR 117          
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A7S2WDJ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDJ3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.970e-9
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 0
Query:  226 GGFARWMGSASKG-WPTFKHQLPEVALAGHTNCGKSTLVNALSGIHPRR 273
            GG A+++ SA    WP FKH LPEVALAGH+NCGKSTL+NAL G+  R+
Sbjct:   28 GGEAKYLTSAQGAPWPRFKHMLPEVALAGHSNCGKSTLLNALVGMPSRK 76          
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A6H5JEC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC2_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 7.870e-8
Identity = 68/176 (38.64%), Postives = 85/176 (48.30%), Query Frame = 0
Query:    5 RLRKGVVLSKSFAWWNSAAL-ESSACRYSTSRLGEAPRPFPATTPVVTTEKSARLPLQLPPQPQQQHPRPFSTDAAFG------TAIHNPNGGIGRRDQPRSTDKQSHGGSLAGERHPFGGTSLLPGDEEAGDRESLSPWGTDAEEDEEQEVIA----VTRGRKERRDSVTESILK 169
            RLR+G  LSKS A W S A+ E+  C  S  R+G A +                    LP  PQQ+H R FST AA G      T++H    G GRR    S   Q+ G   AGE+ PF G  ++  ++EA   E   P G D +E             TRGRKERRDSVT+SI+K
Sbjct:    5 RLREGTALSKSLARWASTAVVETRIC--SVDRIGVAEK--------------------LP--PQQRHLRRFSTSAASGAVAVRNTSVHV---GYGRR----SAHDQAQGDRTAGEK-PFSG--IVRTEQEAWGGEGQLPAGGDVDEXXXXXXXXXXXXTTRGRKERRDSVTDSIVK 146          
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A0M0K2R6_9EUKA (GTP binding protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K2R6_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 1.160e-5
Identity = 51/128 (39.84%), Postives = 63/128 (49.22%), Query Frame = 0
Query:  156 RKERRDSVTESILKERERHLMRLAKSDVDQGMAKTFKGLSLGSRKRPRQAGGFNKAYDQ---TGKQVHSDFAAGGFARWMGSASKG----WPTFKHQ-LPEVALAGHTNCGKSTLVNALSGIHPRRVP 275
            R ER DSV    L +R  HL R++K+D+D  +    + L LG   R R  G   K  DQ   T  Q H      G    +G  S G    W     + LPEV L GH+NCGKS L+NAL+G H R  P
Sbjct:   53 RGERVDSVDSVTLADRVFHLERMSKADIDPKILAEVRALRLG---RIRH-GADQKRADQRRITIAQQHM-----GNTVLLGKTSVGMHHEWDRLNRESLPEVVLLGHSNCGKSALLNALAGTHARHGP 171          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FIT5_ECTSI2.430e-6962.74YihA3, YihA/EngB-like GTPase n=1 Tax=Ectocarpus si... [more]
A0A836CEK3_9STRA6.130e-2956.67P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3M560_9STRA7.070e-2044.26Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9CU55_9STRA7.930e-1342.86EngB-type G domain-containing protein n=2 Tax=Mono... [more]
A0A7S2WDJ3_9STRA3.970e-963.27Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6H5JEC2_9PHAE7.870e-838.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0M0K2R6_9EUKA1.160e-539.84GTP binding protein n=1 Tax=Chrysochromulina tobin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 248..269
e-value: 5.3E-5
score: 23.3
NoneNo IPR availableGENE3D3.40.50.300coord: 229..290
e-value: 2.9E-7
score: 31.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 243..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1123contigP-lacustris_contig1123:49690..53819 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1123.1003.1mRNA_P-lacustris_contig1123.1003.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1123 49519..59615 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1123.1003.1 ID=prot_P-lacustris_contig1123.1003.1|Name=mRNA_P-lacustris_contig1123.1003.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=300bp
MIFRRLRKGVVLSKSFAWWNSAALESSACRYSTSRLGEAPRPFPATTPVV
TTEKSARLPLQLPPQPQQQHPRPFSTDAAFGTAIHNPNGGIGRRDQPRST
DKQSHGGSLAGERHPFGGTSLLPGDEEAGDRESLSPWGTDAEEDEEQEVI
AVTRGRKERRDSVTESILKERERHLMRLAKSDVDQGMAKTFKGLSLGSRK
RPRQAGGFNKAYDQTGKQVHSDFAAGGFARWMGSASKGWPTFKHQLPEVA
LAGHTNCGKSTLVNALSGIHPRRVPPPPLTAQAGPTSWVSTKWARSPRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027417P-loop_NTPase