mRNA_P-lacustris_contig1123.1003.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: D7FIT5_ECTSI (YihA3, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT5_ECTSI) HSP 1 Score: 322 bits (824), Expect = 1.430e-99 Identity = 183/259 (70.66%), Postives = 200/259 (77.22%), Query Frame = 3
Query: 870 FRLQGMAHLQAPTSGGCPSGPHELRQVY------AGERPIWDT-----PAQGPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKADLLTPELLSACVLLLRRELSDLIGPEAGSIASFSAVCGSSGAGVTTLWKDLAKLASKAPGSLVAIQAAHLAARQAREKEDAV----SAASSSREH 1601
F G A S G P+ H L +V G+ + + P +GPASTSDRAGWTDLVGFYQVGKKPPVLT+ VDLPGYGHAVAT+HAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDR+LL+LLAKRNIPYQ IVLTKADLLTPELLSACVLLLRR+LSDL G EAGS A FSAVCG+SGAGVTTLWKDLAK A+KAPGSLVA+QAAHLAAR+AREKE+A AA +SREH
Sbjct: 175 FAAGGFARWMGSASKGWPTFRHRLPEVALAGHTNCGKSTLVNALSGIHPRRGPASTSDRAGWTDLVGFYQVGKKPPVLTM-------VDLPGYGHAVATRHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRALLQLLAKRNIPYQ------IVLTKADLLTPELLSACVLLLRRDLSDLCGQEAGSTAPFSAVCGTSGAGVTTLWKDLAKQAAKAPGSLVAMQAAHLAARKAREKEEADLMARKAARTSREH 420
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A836CEK3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEK3_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.380e-40 Identity = 95/197 (48.22%), Postives = 125/197 (63.45%), Query Frame = 3
Query: 981 PAQGPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYIT-TRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKADLLTPELLSACVLLLRRELSDLIGPEAGSIASFSAVCGSSGAGVTTLWKDLAKLASKAPGSLVAIQAAHLAARQAREKED 1568
P QG A S+RAGWTD V FYQ+GKKPPVLTL VDLPGYGHAVA + + W RM K+Y++ R++L RCCVLVD TRG EEDR LL L +R I +Q +VLTK DLL PE L+ + + ++L D IG + + VCG +GAGVT LW+++ + + PGSLV+ A R+A+ ++D
Sbjct: 137 PRQGLAGVSERAGWTDFVSFYQIGKKPPVLTL-------VDLPGYGHAVANRSMQREWRRMTKDYLSGQRRQLCRCCVLVDATRGLAEEDRILLAHLERRGIEHQ------LVLTKGDLLLPEQLAQSMAAVTQDLMD-IGAKLLAKPPILPVCGHTGAGVTALWENMRTRSLREPGSLVSSIEAARRVREAKLEKD 319
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A7S3M560_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M560_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.870e-29 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 3
Query: 981 PAQGPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKADLLTPELLSACVLLLRRELSDLIGP 1403
P++GPA S+RAGWTD + FYQ+GKKPPV+TLA DLPGYGHAVA+ + W MI++Y+ R L RCC+LVD TRG C+ D+ L++ L K +IP+ +VLTK DLL L+ CVL ++ +L+ + P
Sbjct: 172 PSKGPAKVSERAGWTDQICFYQLGKKPPVMTLA-------DLPGYGHAVASAGQRRAWGEMIRDYLQNRTILSRCCILVDSTRGLCKGDKMLVRFLTKYDIPWM------VVLTKGDLLDCTSLAQCVLAVQLDLAPFVRP 299
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A4D9CU55_9STRA (EngB-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU55_9STRA) HSP 1 Score: 122 bits (306), Expect = 7.800e-27 Identity = 64/119 (53.78%), Postives = 76/119 (63.87%), Query Frame = 3
Query: 981 PAQGPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKADLL 1337
P +G A SDRAGWTD V FYQ+G+KPPVLTLA DLPGYGHAVA+ + W M + Y+ TR+ L CCVLVDC RG C ED LLK L R++ ++VLTK DLL
Sbjct: 115 PRRGVARVSDRAGWTDAVFFYQLGRKPPVLTLA-------DLPGYGHAVASVQQKRRWREMTQSYLATRRVLSVCCVLVDCVRGLCREDGDLLKALRARDVAV------KVVLTKGDLL 220
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A8J6CDF0_DIALT (EngB-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDF0_DIALT) HSP 1 Score: 85.9 bits (211), Expect = 1.980e-14 Identity = 71/222 (31.98%), Postives = 100/222 (45.05%), Query Frame = 3
Query: 846 WRVRALDGFRLQGMAHL-QAPTSGGCP---------SGPHELRQVYAGERPIWDTPAQGPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKADLLTPELLSACVLLLRRELSDLIGPEAGSIASFSAVCGSSGAGVTTLWKDL 1481
WR R G A L P GG P SG L + G +G A S RAGWT + F+++ + + + + LVD+PGYG AVA + W R I+ Y++ R L+ +LVD RG EDR LL L + P+ +VLT+ DLL+P L+ C + EL +L A + S + +G GV LW+ L
Sbjct: 110 WRRRGDATAEYIGCALLGDWPDGGGLPEVALVGQSNSGKSSLLNAFLGS-----ISGEGLAPVSARAGWTAHLSFFRLSAE--LAGEFAPRFVLVDMPGYGDAVADTSTRRTWRRAIRAYLSHRPALLSVLLLVDAERGLETEDRELLARLVRAGTPHA------LVLTRCDLLSPLQLARCHYRVSDELGELNSAAAADVPMISVL---TGVGVRELWERL 315
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: W1PBT7_AMBTC (EngB-type G domain-containing protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PBT7_AMBTC) HSP 1 Score: 84.0 bits (206), Expect = 4.270e-13 Identity = 57/167 (34.13%), Postives = 80/167 (47.90%), Query Frame = 3
Query: 990 GPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKADLLTPELLSACVLLLRRELSDLIGPEAGSIASFSAVCGSSGAGVTTLWKDLAKL 1490
G TSD+ G T + F+Q+G KP LVDLPGYG A A + W ++KEY+TTR L R C+L+D G D+ L+ L+ K YQ IVLTK D + P ++ + +R L + V +GAG+ +L LAK+
Sbjct: 470 GVVRTSDKPGLTQTINFFQLGPKP----------CLVDLPGYGFAYAKEEVKDAWEELVKEYVTTRINLKRVCLLIDTKWGMKPRDQELINLMEKSQTQYQ------IVLTKTDTVFPVDVARRAMQVREALKK----NKSIVQPVMMVSSKTGAGIRSLRSVLAKV 616
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A251VN96_HELAN (Putative GTP binding domain-containing protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VN96_HELAN) HSP 1 Score: 81.6 bits (200), Expect = 1.860e-12 Identity = 46/118 (38.98%), Postives = 62/118 (52.54%), Query Frame = 3
Query: 990 GPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKADLLTP 1343
G TSD+ G T + F+ +G K L LVDLPGYG A A + + W ++KEY++TR+EL R C+L+D G D L+ L+ + YQ IVLTK DL P
Sbjct: 385 GVVRTSDKPGLTQTINFFNLGPK----------LCLVDLPGYGFAYAKEEVKESWEELVKEYVSTREELKRVCLLIDTKWGMKPRDHELVDLMERSKTKYQ------IVLTKTDLSFP 486
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A3D9YXI9_9HYPH (Probable GTP-binding protein EngB n=1 Tax=Methylovirgula ligni TaxID=569860 RepID=A0A3D9YXI9_9HYPH) HSP 1 Score: 77.4 bits (189), Expect = 2.150e-12 Identity = 52/144 (36.11%), Postives = 72/144 (50.00%), Query Frame = 3
Query: 921 PSGPHELRQVYAGERPIWD-------TPAQGPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKAD 1331
PSGP E+ +AG + T + A TS+ G T + F+ +G P +L LVD+PGYGHA A+K+ I W R++ +Y+ R L R VL+D G D +L LL + + YQA VLTKAD
Sbjct: 33 PSGPPEI--AFAGRSNVGKSSLLNALTNRKALARTSNTPGRTQALNFFDLGTPP--------RLRLVDMPGYGHAAASKNKIASWTRLMHDYLRGRATLKRVFVLIDGRHGLKPIDNDMLDLLDRAAVSYQA------VLTKAD 160
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A2E1RZI1_9RHOB (Probable GTP-binding protein EngB n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E1RZI1_9RHOB) HSP 1 Score: 76.3 bits (186), Expect = 4.460e-12 Identity = 54/164 (32.93%), Postives = 77/164 (46.95%), Query Frame = 3
Query: 876 LQGMAHLQAPTSGGCPS---------GPHELRQVYAGERPIWDTPAQGPASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKADLLT 1340
L G+AHL+ P G L AG+ + A TS + G T + F+++G +QLS+VD+PGYG+A A KH + W +++ Y+ RQ+L R VLVD G D + K+L K + YQ +V TKAD LT
Sbjct: 17 LGGVAHLEQLPLANIPEVAFAGRSNVGKSSLINALAGDSTV--------ARTSGQPGRTQQLNFFRLG---------DDQLSVVDMPGYGYAEAPKHLVDSWNELLRNYLMGRQQLRRVFVLVDLRHGMKANDLEIAKMLDKTAVSYQ------LVGTKADKLT 157
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Match: A0A6N0DX42_9HYPH (Probable GTP-binding protein EngB n=1 Tax=Methyloligella sp. GL2 TaxID=2742204 RepID=A0A6N0DX42_9HYPH) HSP 1 Score: 75.9 bits (185), Expect = 7.830e-12 Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = 3
Query: 996 ASTSDRAGWTDLVGFYQVGKKPPVLTLASNQLSLVDLPGYGHAVATKHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRSLLKLLAKRNIPYQASSRSRIVLTKAD 1331
A S G T + F+ +GK + L LVD+PGYG+A A K IKGW R+I++Y+ RQEL R +LVD G + DR+ + L+ + + YQ +VLTKAD
Sbjct: 72 ARVSVTPGRTRELNFFTLGK--------DDTLYLVDMPGYGYAKAAKSEIKGWNRLIEDYLKGRQELRRLFLLVDSRHGLKDSDRATMALMDESAVSYQ------VVLTKAD 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1123.1003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1123.1003.1 >prot_P-lacustris_contig1123.1003.1 ID=prot_P-lacustris_contig1123.1003.1|Name=mRNA_P-lacustris_contig1123.1003.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=300bp MIFRRLRKGVVLSKSFAWWNSAALESSACRYSTSRLGEAPRPFPATTPVVback to top mRNA from alignment at P-lacustris_contig1123:49519..59615+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1123.1003.1 ID=mRNA_P-lacustris_contig1123.1003.1|Name=mRNA_P-lacustris_contig1123.1003.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10097bp|location=Sequence derived from alignment at P-lacustris_contig1123:49519..59615+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1123:49519..59615+ >mRNA_P-lacustris_contig1123.1003.1 ID=mRNA_P-lacustris_contig1123.1003.1|Name=mRNA_P-lacustris_contig1123.1003.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1800bp|location=Sequence derived from alignment at P-lacustris_contig1123:49519..59615+ (Pleurocladia lacustris SAG_25_93)back to top |