prot_P-lacustris_contig112.978.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig112.978.1
Unique Nameprot_P-lacustris_contig112.978.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length182
Homology
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: D8LKM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM1_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 7.490e-50
Identity = 123/167 (73.65%), Postives = 128/167 (76.65%), Query Frame = 0
Query:    1 MSESGAERRSRLKALKEKAANKSVKFRNYRPQDAAIRQRALDDK-------GDTIGGASKGGSEEAASSRTAEAGGRGEGTEXXXXXXXAKRKAIAPPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASSSEE 160
            MSESGAERRSRLKALKEKA NKS+KFRNYRPQDAAIRQ+ALD         G   GGA+KG  E AAS      GG      XXXXXXX         SLIQQELK+QKETQDE ELNIAPKKANWDLKRDVEKKLEKL+RRTQRAIVEIIRERMAEEAANASSS E
Sbjct:    1 MSESGAERRSRLKALKEKA-NKSIKFRNYRPQDAAIRQQALDSSKAGEPTSGSGSGGANKG--EGAASPSGKSMGGXXXXXXXXXXXXXXXXXXAPESSLIQQELKKQKETQDEGELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANASSSGE 164          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A835ZFC6_9STRA (Cwf18 pre-mRNA splicing factor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.480e-16
Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 0
Query:   92 SLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANAS 156
            S+I+QEL++ K+ QDE  LNIAP+K +WDLKRD   KLEKLNRRTQRAIV+I+RE+MAEEAA  S
Sbjct:   86 SIIKQELRKVKDGQDEGTLNIAPRKPDWDLKRDAAPKLEKLNRRTQRAIVQILREKMAEEAAQGS 150          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A7S2W1E1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1E1_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.960e-13
Identity = 64/151 (42.38%), Postives = 83/151 (54.97%), Query Frame = 0
Query:    3 ESGAERRSRLKALKEKAANKSVKFRNYRPQDAAIRQRALDDKGDTIGGASKGGSEEAASSRTAEAGGRGEGTEXXXXXXXAKRKAIAPPSLIQQELKRQKETQDEEE-LNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEA 152
            ES   RR RL+ +    A+K +KFRNYRPQD  ++ +A+                 AA  +      + +            RKA A   +IQQELK     Q  EE LNIAP+K NWDLKRDV KK+EKLN+RTQ AIV++I+ER+  EA
Sbjct:    8 ESAEARRKRLRTMAAGGASK-LKFRNYRPQDTDLKTKAV----------------AAALPKPILDEVQAQPAPDKDASSVQSRKATA---VIQQELKEHVAEQGGEEVLNIAPRKPNWDLKRDVAKKMEKLNKRTQLAIVDLIKERIEREA 138          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: K8Z0J6_NANGC (Coiled-coil domain-containing protein 12 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z0J6_NANGC)

HSP 1 Score: 68.2 bits (165), Expect = 3.560e-11
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 0
Query:   94 IQQELKRQK-ETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASSSE 159
            IQ+ELKR + E     +L +AP+KANWDLKRDV KKL KLNR TQ+AI+EI++E++A+EA   S+SE
Sbjct:   85 IQRELKRHEAEHGSGGQLKVAPRKANWDLKRDVAKKLAKLNRLTQKAIIEILQEKLAQEAEEGSTSE 151          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A7S2CFR4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFR4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.510e-11
Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 0
Query:    1 MSESGAERRSRLKALKEKAANKSVKFRNYRPQDAAIR---------QRALDDKGDTIGGASKGGSEEAASSRTAEAGGRGEGTEXXXXXXXAKRKAIAPPSLIQQELKRQKETQDEEEL-NIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERM 148
            M+E+   RR RL+    +     ++FRNYRPQD+ ++         +  LDD  +T+  A+ G   E    +  +A                          I+ E+K     Q   EL NIAPKK NWDLKRD+ KK++KLNRRTQ AIVEII+ER+
Sbjct:   22 MAETEDARRKRLRTAASEGGAPKLRFRNYRPQDSKLKIESAETPLPKPVLDDVANTVPKAAPGEEPEKKKPKVEDA--------------------------IKAEIKAHVAEQGGNELLNIAPKKPNWDLKRDITKKMDKLNRRTQVAIVEIIKERI 153          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A7S2GKY8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKY8_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.910e-11
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0
Query:  101 QKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAA 153
            QKE   ++ +NIAPKK NWDLKRDV KK+EKLNRRTQ AIVE+I+ER+  EAA
Sbjct:   85 QKEQGGDDLINIAPKKPNWDLKRDVMKKMEKLNRRTQMAIVELIKERIEREAA 137          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A8H7BMD5_9FUNG (Coiled-coil domain-containing protein 12 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BMD5_9FUNG)

HSP 1 Score: 67.0 bits (162), Expect = 7.930e-11
Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 0
Query:  102 KETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASS 157
            KE ++ +  N+APKK NWDLKRDVEKKLEKL+RRT+RAI+EIIRER+  E  + +S
Sbjct:   77 KEKEEVDLFNLAPKKPNWDLKRDVEKKLEKLDRRTKRAILEIIRERLMSENGDKTS 132          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A1X2IBU1_9FUNG (mRNA splicing factor n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IBU1_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 1.230e-10
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 0
Query:  101 QKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAAN 154
            +KE +D +  N+APKKANWDL+RDVEKKLEKL+RRTQ+AI+E IR+R+  E  +
Sbjct:   82 EKEKEDVDLFNLAPKKANWDLRRDVEKKLEKLDRRTQKAILETIRQRLTNEGGS 135          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A1X2GN64_9FUNG (mRNA splicing factor n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GN64_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 1.260e-10
Identity = 33/49 (67.35%), Postives = 45/49 (91.84%), Query Frame = 0
Query:  102 KETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAE 150
            KET + +  N+APKKANWDL+RDVEKK++KL+RRTQRAI++IIR+R+A+
Sbjct:   84 KETDEVDLFNLAPKKANWDLRRDVEKKMQKLDRRTQRAILDIIRQRLAQ 132          
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A7S4PRG1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas paramecium TaxID=2898 RepID=A0A7S4PRG1_9CRYP)

HSP 1 Score: 64.7 bits (156), Expect = 3.700e-10
Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   85 RKAIAPPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAE-EAANASSSE 159
            ++A+ PP+   +        Q++  L++APKK NWDLKRD+ KKLEKL R+TQ+AIVE+IRE++AE E  N   +E
Sbjct:   42 KEAVLPPAKAPEPEVEAPAEQEDVRLDVAPKKPNWDLKRDIAKKLEKLERKTQQAIVEMIREKLAETEGGNEQDTE 117          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKM1_ECTSI7.490e-5073.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFC6_9STRA3.480e-1669.23Cwf18 pre-mRNA splicing factor-domain-containing p... [more]
A0A7S2W1E1_9STRA1.960e-1342.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K8Z0J6_NANGC3.560e-1159.70Coiled-coil domain-containing protein 12 n=3 Tax=M... [more]
A0A7S2CFR4_9STRA4.510e-1136.71Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2GKY8_9STRA5.910e-1169.81Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8H7BMD5_9FUNG7.930e-1164.29Coiled-coil domain-containing protein 12 n=1 Tax=A... [more]
A0A1X2IBU1_9FUNG1.230e-1062.96mRNA splicing factor n=1 Tax=Absidia repens TaxID=... [more]
A0A1X2GN64_9FUNG1.260e-1067.35mRNA splicing factor n=1 Tax=Hesseltinella vesicul... [more]
A0A7S4PRG1_9CRYP3.700e-1048.68Hypothetical protein n=1 Tax=Cryptomonas parameciu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
IPR013169mRNA splicing factor, Cwf18PFAMPF08315cwf18coord: 1..148
e-value: 2.8E-20
score: 73.4
IPR013169mRNA splicing factor, Cwf18PANTHERPTHR31551FAMILY NOT NAMEDcoord: 16..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig112contigP-lacustris_contig112:180368..185006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig112.978.1mRNA_P-lacustris_contig112.978.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig112 179827..185006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig112.978.1 ID=prot_P-lacustris_contig112.978.1|Name=mRNA_P-lacustris_contig112.978.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=182bp
MSESGAERRSRLKALKEKAANKSVKFRNYRPQDAAIRQRALDDKGDTIGG
ASKGGSEEAASSRTAEAGGRGEGTEEGDEEQEAKRKAIAPPSLIQQELKR
QKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAE
EAANASSSEEEGSGSSSSGEEGSGGSSEDEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013169mRNA_splic_Cwf18