mRNA_P-lacustris_contig112.978.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig112.978.1
Unique NamemRNA_P-lacustris_contig112.978.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: D8LKM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM1_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 2.150e-47
Identity = 123/167 (73.65%), Postives = 128/167 (76.65%), Query Frame = 1 
Query:    1 MSESGAERRSRLKALKEKAANKSVKFRNYRPQDAAIRQRALDDK-------GDTIGGASKGGSEEAASSRTAEAGGRGEGTEXXXXXXXAKRKAIAPPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASSSEE 480
            MSESGAERRSRLKALKEKA NKS+KFRNYRPQDAAIRQ+ALD         G   GGA+KG  E AAS      GG      XXXXXXX         SLIQQELK+QKETQDE ELNIAPKKANWDLKRDVEKKLEKL+RRTQRAIVEIIRERMAEEAANASSS E
Sbjct:    1 MSESGAERRSRLKALKEKA-NKSIKFRNYRPQDAAIRQQALDSSKAGEPTSGSGSGGANKG--EGAASPSGKSMGGXXXXXXXXXXXXXXXXXXAPESSLIQQELKKQKETQDEGELNIAPKKANWDLKRDVEKKLEKLDRRTQRAIVEIIRERMAEEAANASSSGE 164
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BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A835ZFC6_9STRA (Cwf18 pre-mRNA splicing factor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 8.660e-15
Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 1 
Query:  274 SLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANAS 468
            S+I+QEL++ K+ QDE  LNIAP+K +WDLKRD   KLEKLNRRTQRAIV+I+RE+MAEEAA  S
Sbjct:   86 SIIKQELRKVKDGQDEGTLNIAPRKPDWDLKRDAAPKLEKLNRRTQRAIVQILREKMAEEAAQGS 150
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BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A7S2W1E1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1E1_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.200e-12
Identity = 64/151 (42.38%), Postives = 83/151 (54.97%), Query Frame = 1 
Query:    7 ESGAERRSRLKALKEKAANKSVKFRNYRPQDAAIRQRALDDKGDTIGGASKGGSEEAASSRTAEAGGRGEGTEXXXXXXXAKRKAIAPPSLIQQELKRQKETQDEEE-LNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEA 456
            ES   RR RL+ +    A+K +KFRNYRPQD  ++ +A+                 AA  +      + +            RKA A   +IQQELK     Q  EE LNIAP+K NWDLKRDV KK+EKLN+RTQ AIV++I+ER+  EA
Sbjct:    8 ESAEARRKRLRTMAAGGASK-LKFRNYRPQDTDLKTKAV----------------AAALPKPILDEVQAQPAPDKDASSVQSRKATA---VIQQELKEHVAEQGGEEVLNIAPRKPNWDLKRDVAKKMEKLNKRTQLAIVDLIKERIEREA 138
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BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: K8Z0J6_NANGC (Coiled-coil domain-containing protein 12 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z0J6_NANGC)

HSP 1 Score: 68.2 bits (165), Expect = 4.200e-10
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1 
Query:  280 IQQELKRQK-ETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASSSE 477
            IQ+ELKR + E     +L +AP+KANWDLKRDV KKL KLNR TQ+AI+EI++E++A+EA   S+SE
Sbjct:   85 IQRELKRHEAEHGSGGQLKVAPRKANWDLKRDVAKKLAKLNRLTQKAIIEILQEKLAQEAEEGSTSE 151
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BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A7S2CFR4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFR4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 5.370e-10
Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 1 
Query:    1 MSESGAERRSRLKALKEKAANKSVKFRNYRPQDAAIR---------QRALDDKGDTIGGASKGGSEEAASSRTAEAGGRGEGTEXXXXXXXAKRKAIAPPSLIQQELKRQKETQDEEEL-NIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERM 444
            M+E+   RR RL+    +     ++FRNYRPQD+ ++         +  LDD  +T+  A+ G   E    +  +A                          I+ E+K     Q   EL NIAPKK NWDLKRD+ KK++KLNRRTQ AIVEII+ER+
Sbjct:   22 MAETEDARRKRLRTAASEGGAPKLRFRNYRPQDSKLKIESAETPLPKPVLDDVANTVPKAAPGEEPEKKKPKVEDA--------------------------IKAEIKAHVAEQGGNELLNIAPKKPNWDLKRDITKKMDKLNRRTQVAIVEIIKERI 153
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BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A8H7VG57_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VG57_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 5.680e-10
Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 1 
Query:    1 MSESGAERRSRLKALKEK---AANKSVKFRNYRPQDAAIRQRAL----DDKGDTIGGASKGGSEEAASSRTAEAGGRGEGTEXXXXXXXAKRKAIAPPSLIQQELKRQKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEE 453
            M +    R+ RL AL+++   + + S+KFR+Y P D  ++Q+      DD G+T+   +K  ++EA ++                                      ++E ++ + +N+ PKK NWDLKRDVEKKLEKL+RRTQRAI+EIIR+R++ E
Sbjct:    1 MEKEAQNRKERLAALRKRKTESGSDSLKFRSYTPTDENLKQQTQIVTPDDIGETVESQTKDFTKEALAAAA------------------------------------EQEKEEVDLINLQPKKPNWDLKRDVEKKLEKLDRRTQRAILEIIRQRLSGE 122
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BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A7S2GKY8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKY8_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.620e-10
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 1 
Query:  301 QKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAA 459
            QKE   ++ +NIAPKK NWDLKRDV KK+EKLNRRTQ AIVE+I+ER+  EAA
Sbjct:   85 QKEQGGDDLINIAPKKPNWDLKRDVMKKMEKLNRRTQMAIVELIKERIEREAA 137
[Close]
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A8H7BMD5_9FUNG (Coiled-coil domain-containing protein 12 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BMD5_9FUNG)

HSP 1 Score: 67.0 bits (162), Expect = 8.670e-10
Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 1 
Query:  304 KETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAANASS 471
            KE ++ +  N+APKK NWDLKRDVEKKLEKL+RRT+RAI+EIIRER+  E  + +S
Sbjct:   77 KEKEEVDLFNLAPKKPNWDLKRDVEKKLEKLDRRTKRAILEIIRERLMSENGDKTS 132
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BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A1X2IBU1_9FUNG (mRNA splicing factor n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IBU1_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 1.320e-9
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 1 
Query:  301 QKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAEEAAN 462
            +KE +D +  N+APKKANWDL+RDVEKKLEKL+RRTQ+AI+E IR+R+  E  +
Sbjct:   82 EKEKEDVDLFNLAPKKANWDLRRDVEKKLEKLDRRTQKAILETIRQRLTNEGGS 135
[Close]
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Match: A0A1X2GN64_9FUNG (mRNA splicing factor n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GN64_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 1.350e-9
Identity = 33/49 (67.35%), Postives = 45/49 (91.84%), Query Frame = 1 
Query:  304 KETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAE 450
            KET + +  N+APKKANWDL+RDVEKK++KL+RRTQRAI++IIR+R+A+
Sbjct:   84 KETDEVDLFNLAPKKANWDLRRDVEKKMQKLDRRTQRAILDIIRQRLAQ 132
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig112.978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKM1_ECTSI2.150e-4773.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFC6_9STRA8.660e-1569.23Cwf18 pre-mRNA splicing factor-domain-containing p... [more]
A0A7S2W1E1_9STRA3.200e-1242.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K8Z0J6_NANGC4.200e-1059.70Coiled-coil domain-containing protein 12 n=3 Tax=M... [more]
A0A7S2CFR4_9STRA5.370e-1036.71Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8H7VG57_9FUNG5.680e-1034.18Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A7S2GKY8_9STRA6.620e-1069.81Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8H7BMD5_9FUNG8.670e-1064.29Coiled-coil domain-containing protein 12 n=1 Tax=A... [more]
A0A1X2IBU1_9FUNG1.320e-962.96mRNA splicing factor n=1 Tax=Absidia repens TaxID=... [more]
A0A1X2GN64_9FUNG1.350e-967.35mRNA splicing factor n=1 Tax=Hesseltinella vesicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig112contigP-lacustris_contig112:179827..185006 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score175.3
Seed ortholog evalue2.7e-41
Seed eggNOG ortholog2880.D8LKM1
Preferred nameCCDC12
KEGG koko:K12871
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0070035,GO:0071014,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.RNA splicing
EggNOG OGsKOG3407@1,KOG3407@2759
Ec32 ortholog descriptionmRNA splicing factor, Cwf18
Ec32 orthologEc-16_003480.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons5
Model size1087
Cds size546
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig112.978.1prot_P-lacustris_contig112.978.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig112 180368..185006 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815422.933485-UTR-P-lacustris_contig112:179826..1803671622815422.933485-UTR-P-lacustris_contig112:179826..180367Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig112 179827..180367 -
1693493532.4722452-UTR-P-lacustris_contig112:179826..1803671693493532.4722452-UTR-P-lacustris_contig112:179826..180367Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig112 179827..180367 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815422.9463995-CDS-P-lacustris_contig112:180367..1804631622815422.9463995-CDS-P-lacustris_contig112:180367..180463Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 180368..180463 -
1693493532.4834518-CDS-P-lacustris_contig112:180367..1804631693493532.4834518-CDS-P-lacustris_contig112:180367..180463Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 180368..180463 -
1622815422.9606645-CDS-P-lacustris_contig112:181757..1819011622815422.9606645-CDS-P-lacustris_contig112:181757..181901Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 181758..181901 -
1693493532.491897-CDS-P-lacustris_contig112:181757..1819011693493532.491897-CDS-P-lacustris_contig112:181757..181901Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 181758..181901 -
1622815422.9716535-CDS-P-lacustris_contig112:182772..1828581622815422.9716535-CDS-P-lacustris_contig112:182772..182858Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 182773..182858 -
1693493532.5015628-CDS-P-lacustris_contig112:182772..1828581693493532.5015628-CDS-P-lacustris_contig112:182772..182858Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 182773..182858 -
1622815422.98579-CDS-P-lacustris_contig112:183212..1832331622815422.98579-CDS-P-lacustris_contig112:183212..183233Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 183213..183233 -
1693493532.5097084-CDS-P-lacustris_contig112:183212..1832331693493532.5097084-CDS-P-lacustris_contig112:183212..183233Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 183213..183233 -
1622815422.9978368-CDS-P-lacustris_contig112:184807..1850061622815422.9978368-CDS-P-lacustris_contig112:184807..185006Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 184808..185006 -
1693493532.518713-CDS-P-lacustris_contig112:184807..1850061693493532.518713-CDS-P-lacustris_contig112:184807..185006Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig112 184808..185006 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig112.978.1

>prot_P-lacustris_contig112.978.1 ID=prot_P-lacustris_contig112.978.1|Name=mRNA_P-lacustris_contig112.978.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=182bp
MSESGAERRSRLKALKEKAANKSVKFRNYRPQDAAIRQRALDDKGDTIGG
ASKGGSEEAASSRTAEAGGRGEGTEEGDEEQEAKRKAIAPPSLIQQELKR
QKETQDEEELNIAPKKANWDLKRDVEKKLEKLNRRTQRAIVEIIRERMAE
EAANASSSEEEGSGSSSSGEEGSGGSSEDEE*
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mRNA from alignment at P-lacustris_contig112:179827..185006-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig112.978.1 ID=mRNA_P-lacustris_contig112.978.1|Name=mRNA_P-lacustris_contig112.978.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5180bp|location=Sequence derived from alignment at P-lacustris_contig112:179827..185006- (Pleurocladia lacustris SAG_25_93)
ATGAGCGAGAGTGGGGCTGAGAGGAGGAGTCGGTTGAAAGCTCTGAAGGA
GAAGGCGGCAAATAAGAGCGTCAAGTTCAGAAACTATCGACCGCAAGATG
CTGCCATCAGACAACGGGCCCTGGACGACAAGGGTGACACTATTGGCGGT
GCAAGTAAGGGGGGCAGTGAAGAAGCGGCATCGAGTAGGACTGCGGAAGG
TGTGTTCGTGTGGTGGTGTGTACGACGATCACGGAACGTAGCTCGACTAC
AATAACCTCTTGTGTTTGAACCCACGGCATCTCAGCACGACGTTGTTTGG
ATACATATGGAGGATCTGTTCTCCTCGTGTGTGGTGGTCCCGTTGGCAAC
CCGAGGGTCTGGGGGTGATTAACCGATTTCGTCTGGAGTTTGAATGCCTG
TTTTAAGCGAATAAAGCAATATAAGCTGCTAGATCGTTATATTGGGTCGT
CACCGTCAGACCCAACTATGCAGCAGTCTTTTTTTTTCTGTTGATGCAAC
ATACCAGCCACCCCTTATATTCCGTCACAAATTTCAAATTTCCTTCGTGT
ACTCCACCGCATTGCTCAATTATCAACGCATTATGAAGGCGAGTCCTGCT
TACGTTGCGTCTTTTGGACTTTTTCAGTCGACCCCATGATTTCTCTTGCT
ATGGTCGGGAACACCCTCAATTGTTGAAGAAGCCTCGCCTCGTGGCCTTG
TTTGTTACTGTATACTTCGTATTGTTCAAGTTCTGCTGTTGTTTGTGGTA
ACTCTGTACCTCCGCTTTTGCCTCTGCAAGGCAAGTGGTAGGGGGTGATG
AAAAGATAGTGGCAACATCGACGCGCCTTTCGCCCTTGGCACCTTATTTG
TTGCTTATGCGTGAAATAATGAATGGTCTCGCCGTCACAGAACCAACAGG
GAAAACGAGTCGGTTGGAGTGGCACGCAGACTGACGGAACGGTCCAGCTT
TCTAAGCACTTGTGAAAGAGAATCGAAAACAACCTCCGAGGAGATTTCCT
CCTGCGGTTACTCACTCTCGCTCTCTTTTGCTTCTCTCCGTGGAGTTACC
TAGGGAGAAAGGATGAGTGTTCGCTAAACTTGAGCCCCGAGCTACTTGGA
AGGAGAGGATTATTTTTTGCTCAAGATGAGCTCCCTGCCCCTGGGGGTGC
TGTAGCTAAAAAAATCTCAAAAAGTGGGTAGGGTTTGTCGATGATGAGCC
CCACGCCCCGTGGGGGGAAAAACAGCGAGGAGGGGTGCCAAAAATGGCGT
CATTTTCCGCTCCTTTCGTTTAACCTGCGATGAATAACAACAACGACGGC
TGCACTCAAGCGAGGTGTTTCATGGTGCAGCAGTTGCCCTGCCGAAAACA
ACGTGTTGGCCGTCAAGTGTCCCCGAAAGCATCGCTTGCCGGATTCATGC
ACGAGCACTCGATGCGCCCAACAAAAGCAAGAGGGGAGGAATCGTTACTA
GAAGAGTTTTGCGTGGGAAGTTATACAAGTCTAACACCGGCCGCACGTGC
GGTGCAGATGCTTCAACACGTGGCACGAAGTCGAGAATCTGACAAGGGTC
ACATTCAGCTGTCACGGCAAAGACTCCTACAAAGCCCCTGGGGCTTCCTC
TGGTGGTAGGCGGTAGTCCTTCTCTGGTGTTTTGTATGCTTTCTGCACAT
TGGGTCGATCCTCCCGAGGTATCGGCGATTAAGAAAGGTTTGACGCGGGA
GTTGATAATGTTTCTCACAAAACGTTAAACTCCCCCCCGGTTTACTCAAG
TTTTTCCCAACTTTTCGGCGAAGCTGGGGGGAGAGGGGAGGGGAGTGGCT
CAACGGAGATTGCCGTATTTGGCCAATTGCCAGATTTCTAGCACGTCCAA
ACCCTACAGGGTTTTCACACGAAGAATGGTTTCGACCTTGTCTTCAAGGC
GTAAGAAATGAAACGTGTGTTTGAGTCCAGCACGAGATAGATAGGAAGAA
AGATAAACAGCCCAATGCACGCGCTTTCATCTGTCCTACGGCTTGCTCTA
CACGCGACTTCGATTCAATGTCTCACGGGCAACACAACGTCTAGTACATC
GCATACGTTATTATGCATCGCTCCTTCATGTCCGTCCATTCGGTGTCAAC
GCTAACTGACTCATGACCCTCGCCTGCCCGACGCAATCGTAGGCCGAGCA
GAGGAAGGAGATGAAGAGCAGGAGGCGAAACGAAAAGCGATAGCGCCACC
AAGCCTTATCCAGCAAGAGCTCAAGAGGCAGAAGGTGGCAGTTGCTGAGG
CCAGCGATAGGCAGGGTGGAACTCGTCGCCAAGTCCGGATCTCAAGGACG
AATGGCCTCGACCCGCGACTGACGTTGACAACTTACACACTTGCAACAAA
ATTCCTTTGTCTGCAAGATTCCACCGCTGTCGAACACTCTATGATGCATG
ATTCCGAGGAGGGGCAACCGACCAGCCAAGCGAATCTCGATCGCTTTTAG
CCACGTCTTTCATGGCATGTAATATACGAACGTTTCGCAGAGTAACGCTA
TTCGGTACCACGGAGAAGGCGCCACCACGATCTACGGCAGATAGCTACTG
CGTTCTTAACGAGCTCTCTCCGTGCAACACCAGCTAGACCGACGGTAGCG
CATGGAGAAGTGGCTACCACGCTACCCGGCCTCGCTTTCACCTGTGGACG
GTGCCGACGGTACCGTACGATATCGTGGAAAACCGTAACACTCTCTCTTC
TTCGCTTGGGCCCTCTCTTTGGTAGTTCCACAACAATCGGAGGAATCACA
TCCCTGTGGATCATTTTTTAAAGCTCGGTTGCTCCACAAACAATGTTTAC
CGAGAGTGGCCGATACAGCAAAGGAAGGAAAAGCAAGGGTTGCACACAAC
GACAACCCTTGTTGGCATTGGCACCCTCACCCTCGTGGTTGTGGAACAAT
CAAAAGCTTCAACAATCGGTTCGGGGCGGGGTGGGGGGCATCTCCACCGA
TTACGGTTACAAATCTGGACGGGACAACTTAGCTTCGGCTTTGTTTCGTT
TTCTTCTCGCACACAACGTCGACAAATGTACGCGTGTGCTGCTGACGGAC
CCTACGCATCCGGTGTAATCATACAAGCCTGACTGACTGGCTGCTGTCGC
TGCAGGAGACGCAAGACGAGGAGGAGCTGAACATCGCCCCCAAGAAAGCC
AACTGGGACTTGAAGCGAGACGTGGAGAAAAAGCTGGAGAAGCTCAACCG
AAGAACGCAACGCGCGATCGTCGAGATCATTCGCGAGCGAATGGCCGAGG
TGCGATGGTCTATAGAGGCGCTTTGGTTCGGCGTGTTGCGGGGACGGGGG
GAGGGGTGGTAACAACAACAGTTGGCCTGCGGATTAGTAAATAGTGCAGT
TTCGGCGAATGTGGCTGTGGCTCGATGGTGAGTTTTTGTTTTTTGTATCG
TGTAGCTTCTTTGCATGCTGGTACCGTGGAATGCTTCGTTGTCTCCTTGC
CTTTTGTTCTGCCTCCCACCATTGATTGTCTCTTTTCCATCCCTTGCATC
ATGTCTGCACTTCTTTAGTCGGTGAGGAGGACTTACTTGATGTAGGATGT
GCCTCTACCGGGGAGAAACCGGCACGGAACACCCCGGTATTGTAGGGGTA
TCAAGATAGAGTCAGGGGTGCGTATGCCCCCTGATTGGTGATGTTGATGT
TCCAGTTTTGTTTCTACCTTTGCATAGCGTGTGGAGGGTGGCGGAGGGCT
CCAATACTACTACTACAGCAGTACTTCGTTTTTTTTCAGGTACTCTTTGG
TTTTTGTTATCGTTCTGCGGACCGTTCGGGTCTATTTTGTTTTGTATACC
TTTTTTAGGTAAGTCAGCCTGTGACCACGGGGACTGACCGCGTCAAGTGT
TGGATTTGTACGGAGAGATTCCGACGGACGAAGGTACTGGATAGAGAGAC
CGGGATGGTTTTTAATGTGAAGACAACAACAACAACAATACCGAGACAAA
GGCATGATTTGCAGATTTGTTTCACGACCGTCGTTGAGGCCTTGCGTTTC
CTCCGTGAGCGCACGTGGCCGAGGTCTTTTTCGTGAGAAAAAGACTAACG
ACTAGCGAGGCATAACCGGCAGAGCACGCCTTATATCCTACGATGCCCTT
CACCTGGCGTGCTTTTTTCTTACTACCCTCGGCCTGAGGTGGGGCGAGGT
AAGATGAGATGGGACAGCTGGATCGTTCAGTTTGCGATTTTTCGTTTAGT
CCTAGCCCTTTCTGTCCTTTCCCACAGCAAATCTGTTATATTCCTTTTTT
CATCAATGTCCCGAACGAACAGGAGTATCTTGTCCTCGCTTAGCGCTGGC
CATCAAGATGCACCGAGAGGCTTATTTATCGTTTTTCCCAGTACATGAAG
CGGGCATGACCCTCTGCTACACCCACACTCTACCAGCGTTTGTATCGCCG
CGTTGACTCGAAGTATAGGCTTCGTGTTGCACCTTCGTTGGGTTTCGCAT
CAATCGTGCATATCATGTCGCCCTAAGGCTCATCGTAGCTCTACTTCGTG
TCGTCGCCGTACCCCATACCGATCCCCTCATCTTTCGCACCAGGAGGCCG
CAAACGCGAGCAGCAGCGAGGAGGAAGGCAGCGGGAGCAGCAGCAGCGGG
GAGGAAGGGAGTGGTGGCAGTTCTGAGGACGAAGAGTAAATAGTACCGTG
GGATGGATGCTGCTGTGTGGGTCACCCCTTCCGTTTTCCGTGACGTCTAG
GTGATTGGGCGTGTGCGTCCTGTGGTGATGGGCGTGGCAGGCAACGCTCG
TCCTTGTTGTCTGAGTTTTTCGGGGGGGGGGGGCTCCGTGGTTTTGTCGC
GGAAAGTTACCGGCGAGGAGGGTAGGTGCGAACAGCCTCCCGAACGGTGG
TGGGACAACACTGGGATTGGTTGAGAAGGAGATTGTTTTTTGGTGAGCTC
CACTGCGTCCCGCTGGTGCTGCACCTGTACCTGCTGGTGGCCGTCCCTCT
GTTTCCGTACGGAAGTCTCGCGGTTGTGGTCGAAGGCCCTTCCAAGGGCG
CTCATCGGACGATATTCCCCCCCGGCCGCGACAGGGTCAAAAACCTCTGG
TGTTTTTGCTGTACAAGTCGGGGTTGTCGTTACCAGGCAGGCCATTTTCA
GGAAGCAACTCTTTCAAGCTAGTTCGGCCAACAACACAAAAATCGCTCCT
CAAGTCATAACTTTTGAAGGAAAAGAACGG
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Coding sequence (CDS) from alignment at P-lacustris_contig112:179827..185006-

>mRNA_P-lacustris_contig112.978.1 ID=mRNA_P-lacustris_contig112.978.1|Name=mRNA_P-lacustris_contig112.978.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1092bp|location=Sequence derived from alignment at P-lacustris_contig112:179827..185006- (Pleurocladia lacustris SAG_25_93)
ATGAGCGAGAGTGGGGCTGAGAGGAGGAGTCGGTTGAAAGCTCTGAAGGA
GAAGGCGGCAAATAAGAGCGTCAAGTTCAGAAACTATCGACCGCAAGATG
CTGCCATCAGACAACGGGCCCTGGACGACAAGGGTGACACTATTGGCGGT
GCAAGTAAGGGGGGCAGTGAAGAAGCGGCATCGAGTAGGACTGCGGAAGA
TGAGCGAGAGTGGGGCTGAGAGGAGGAGTCGGTTGAAAGCTCTGAAGGAG
AAGGCGGCAAATAAGAGCGTCAAGTTCAGAAACTATCGACCGCAAGATGC
TGCCATCAGACAACGGGCCCTGGACGACAAGGGTGACACTATTGGCGGTG
CAAGTAAGGGGGGCAGTGAAGAAGCGGCATCGAGTAGGACTGCGGAAGCT
GGGGGGAGAGGGGAGGGGACTGGGGGGAGAGGGGAGGGGACAGAGGAAGG
AGATGAAGAGCAGGAGGCGAAACGAAAAGCGATAGCGCCACCAAGCCTTA
TCCAGCAAGAGCTCAAGAGGCAGAAGCAGAGGAAGGAGATGAAGAGCAGG
AGGCGAAACGAAAAGCGATAGCGCCACCAAGCCTTATCCAGCAAGAGCTC
AAGAGGCAGAAGGAGACGCAAGACGAGGAGGAGCTGAACATCGCCCCCAA
GAAAGCCAACTGGGACTTGAAGCGAGACGTGGAGAAAAAGCTGGAGAAGC
TCAACCGAAGAACGCAACGCGCGATCGTCGAGATCATTCGCGAGCGAATG
GCCGAGGAGACGCAAGACGAGGAGGAGCTGAACATCGCCCCCAAGAAAGC
CAACTGGGACTTGAAGCGAGACGTGGAGAAAAAGCTGGAGAAGCTCAACC
GAAGAACGCAACGCGCGATCGTCGAGATCATTCGCGAGCGAATGGCCGAG
GAGGCCGCAAACGCGAGCAGCAGCGAGGAGGAAGGCAGCGGGAGCAGCAG
CAGCGGGGAGGAAGGGAGTGGTGGCAGTTCTGAGGACGAAGAGTAAGAGG
CCGCAAACGCGAGCAGCAGCGAGGAGGAAGGCAGCGGGAGCAGCAGCAGC
GGGGAGGAAGGGAGTGGTGGCAGTTCTGAGGACGAAGAGTAA
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