prot_P-lacustris_contig111.910.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig111.910.1
Unique Nameprot_P-lacustris_contig111.910.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length145
Homology
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BLAST of mRNA_P-lacustris_contig111.910.1 vs. uniprot
Match: D7FYV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV2_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 1.180e-54
Identity = 103/143 (72.03%), Postives = 114/143 (79.72%), Query Frame = 0 
Query:    3 ALRARANGAPRVRKRWCVLDATRFTLFHTRSKTKIKDFVELDPKKVVLVTPPFTPWGRAGGGCSSAGGAGGSVGAGKGEDATNERDAVALVCFDFPAETGTLVIRAESVESQDVWVRAFAARLTSRDHHARMSELYGAG-GDE 144
            A+RARANGAP+VRKRWCVLDATR TLF TR+KT++K+ V+LDP +V LVTPPFTPWGRAGGG               GED TNERDAVALV F  P ETGTLVIRAESVE+Q VWVRA AARLTSR+HHARM+ELYG G GDE
Sbjct: 4709 AIRARANGAPKVRKRWCVLDATRLTLFRTRTKTRVKESVQLDPSRVALVTPPFTPWGRAGGGVXXXXXXXXXXXX-XGEDVTNERDAVALVVFRNPTETGTLVIRAESVEAQHVWVRALAARLTSREHHARMAELYGGGAGDE 4850
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BLAST of mRNA_P-lacustris_contig111.910.1 vs. uniprot
Match: A0A836CI77_9STRA (DENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI77_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.010e-16
Identity = 53/132 (40.15%), Postives = 74/132 (56.06%), Query Frame = 0 
Query:   13 RVRKRWCVLDATRFTLFHTRSKTKIKDFVELDPKKVVLVTPPFTPWGRAGGGCSSAGGAGGSVGAGKGEDATNERDAVALVCFD---FPAET--GTLVIRAESVESQDVWVRAFAARLTSRDHHARMSELYG 139
            +V++RWC+LDAT+ + + +RSKT++K ++  +P  V LVTPPF                  +V +G    AT E D VALV       P E+  GTLVIRAE + +  + VRA  A+LT R+H   M  LYG
Sbjct: 4017 KVKRRWCILDATKLSYYRSRSKTRVKGYIPFEPASVSLVTPPF------------------AVHSGH---ATTEHDCVALVWNQEAAAPGESVPGTLVIRAEDMTTHRMLVRALKAKLTPREHLTMMRSLYG 4127
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig111.910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYV2_ECTSI1.180e-5472.03PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A836CI77_9STRA2.010e-1640.15DENN domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 3..136
e-value: 9.8E-8
score: 33.7
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 13..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig111contigP-lacustris_contig111:160683..161117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig111.910.1mRNA_P-lacustris_contig111.910.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig111 160339..161402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig111.910.1 ID=prot_P-lacustris_contig111.910.1|Name=mRNA_P-lacustris_contig111.910.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=145bp
MAALRARANGAPRVRKRWCVLDATRFTLFHTRSKTKIKDFVELDPKKVVL
VTPPFTPWGRAGGGCSSAGGAGGSVGAGKGEDATNERDAVALVCFDFPAE
TGTLVIRAESVESQDVWVRAFAARLTSRDHHARMSELYGAGGDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf