prot_P-lacustris_contig11.810.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig11.810.1
Unique Nameprot_P-lacustris_contig11.810.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length187
Homology
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BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: A0A6H5JCW1_9PHAE (ACPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW1_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 4.960e-49
Identity = 93/158 (58.86%), Postives = 103/158 (65.19%), Query Frame = 0 
Query:   31 GDLGPPCGGNCTANLAEEKGLRAEQVRWQGRQESGCDESGGH--DGSSVRVIAAGECDYLAQEDSVGCTCGAGDVTVKVDGVPRPDWTFKVFPLPDGYAACVARGPPSACSPSGQEAGVISDTQAPRHGRSLPQLRFLKVRLEEIVPGEVARRLFGQG 186
            G +   CGG+   N AE KG+ AE+VR   R       S G    G+           +  QED +GC CG G VTVKVD V RPDW+FKVF LPDGYAACVARGPPSACSPSGQEAGVISD  A   G+SLPQLRF KV LEEIVP E A RLFG+G
Sbjct:  345 GGVDRSCGGDSKVNNAEGKGIEAEKVRANRRNNGDVVASEGRASTGADAGAAEGRRGGFWGQEDRLGCACGMGAVTVKVDNVLRPDWSFKVFSLPDGYAACVARGPPSACSPSGQEAGVISDAHASERGQSLPQLRFRKVGLEEIVPPEAAARLFGEG 502
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCW1_9PHAE4.960e-4958.86ACPS domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig11contigP-lacustris_contig11:99299..100631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig11.810.1mRNA_P-lacustris_contig11.810.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig11 98791..106195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig11.810.1 ID=prot_P-lacustris_contig11.810.1|Name=mRNA_P-lacustris_contig11.810.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=187bp
MRVSGGGSGVGTDSHTGLHNIGGGGGGGGQGDLGPPCGGNCTANLAEEKG
LRAEQVRWQGRQESGCDESGGHDGSSVRVIAAGECDYLAQEDSVGCTCGA
GDVTVKVDGVPRPDWTFKVFPLPDGYAACVARGPPSACSPSGQEAGVISD
TQAPRHGRSLPQLRFLKVRLEEIVPGEVARRLFGQG*
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