mRNA_P-lacustris_contig11.810.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig11.810.1
Unique NamemRNA_P-lacustris_contig11.810.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: A0A6H5JCW1_9PHAE (ACPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW1_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 7.410e-156
Identity = 253/390 (64.87%), Postives = 280/390 (71.79%), Query Frame = 3 
Query:  528 ENDRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFVPGDWVD--LCSPKPQQQRRRLPAASCTAA------AGMRVSGGGSGVGTDSHTGLHNIGGXXXXXXQ-------GDLGPPCGGNCTANLAEEKGLRAEQVRWQGRQESGCDESGGH--DGSSVRVIAAGECDYLAQEDSVGCTCGAGDVTVKVDGVPRPDWTFKVFPLPDGYAACVARGPPSACSPSGQEAGVISDTQAPRHGRSLPQLRFLKVRLEEIVPGEVARRLFGQG 1646
            ENDRKLALGSRLLQRA+VSKVFGL F E+DIRRT+ESKPFFAGVVKA+++GSVSPLLKNWNFN+SHHGKYVA+ASEP CLCGVD+VDT RRANEQGPA+DYL+YFT HFTDDEW TIKSP DD  KLRRFY+HWGLKEAYVKAIGQGLGYDLRR SF+PGDWVD   C  + Q+  RR P     AA       G +V G G+  GT           XXXXXX        G +   CGG+   N AE KG+ AE+VR   R       S G    G+           +  QED +GC CG G VTVKVD V RPDW+FKVF LPDGYAACVARGPPSACSPSGQEAGVISD  A   G+SLPQLRF KV LEEIVP E A RLFG+G
Sbjct:  113 ENDRKLALGSRLLQRALVSKVFGLEFDEIDIRRTAESKPFFAGVVKAIDDGSVSPLLKNWNFNVSHHGKYVAVASEPACLCGVDVVDTNRRANEQGPAEDYLQYFTGHFTDDEWTTIKSPADDVEKLRRFYIHWGLKEAYVKAIGQGLGYDLRRVSFLPGDWVDCWFCLQEKQRWPRRCPCPRSLAALDPATPGGQQVGGCGTVDGTXXXXXXXXXXXXXXXXXXXXXXXXVGGVDRSCGGDSKVNNAEGKGIEAEKVRANRRNNGDVVASEGRASTGADAGAAEGRRGGFWGQEDRLGCACGMGAVTVKVDNVLRPDWSFKVFSLPDGYAACVARGPPSACSPSGQEAGVISDAHASERGQSLPQLRFRKVGLEEIVPPEAAARLFGEG 502
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: D8LR25_ECTSI (4\'-phosphopantetheinyl transferase superfamily protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR25_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.950e-109
Identity = 199/315 (63.17%), Postives = 223/315 (70.79%), Query Frame = 3 
Query:  528 ENDRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFVPGDWVDLCSPKPQQQRR--RLPAASCTAA------AGMRVSGGGSGVGTDSHTGLHN-------IGGXXXXXXQGDLGPPCGGNCTANLAEEKGLRAEQVRWQGRQESG----CDESGGHDGSSVRVIAA--GECDYLAQEDSVGCTCGAGDVTVKV 1409
            ENDRKLALGSRLLQRAVVSKVFGL F E+DIRRTSESKPFFAGVVKA+ +GSVSPLLKNWNFN+SHHGKYVAIASEP CLCGVD+VDT RRANEQGPA+DYL+YFT HFTDDEW TIKSP DD  KLRRFYLHWGLKEAYVKAIGQGLGYDLRR SF+PGDWVD      ++QRR  R P     AA       G +V G G+  GTDS     +          XXXXXX G +   CGG+   + AE+KG+ AE+V W  R+  G    C+   GH  S     AA  G   +  +E S+GCTC  G VTVKV
Sbjct:  115 ENDRKLALGSRLLQRAVVSKVFGLEFHEIDIRRTSESKPFFAGVVKAINDGSVSPLLKNWNFNVSHHGKYVAIASEPACLCGVDVVDTNRRANEQGPAEDYLQYFTGHFTDDEWTTIKSPADDMKKLRRFYLHWGLKEAYVKAIGQGLGYDLRRVSFLPGDWVDCWFSLQEKQRRPRRCPCPRSLAALDPATSGGQQVGGCGAVDGTDSGADADSGDDCGXXXXXXXXXXXIGGVDRSCGGDSKVHSAEDKGIEAEKV-WAHRRNKGDVVGCE---GHASSGADRGAAEGGGGGFWGREGSLGCTCAVGVVTVKV 425
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: W2R8Y1_PHYPN (ACPS domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2R8Y1_PHYPN)

HSP 1 Score: 140 bits (353), Expect = 1.260e-33
Identity = 68/156 (43.59%), Postives = 100/156 (64.10%), Query Frame = 3 
Query:  534 DRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFV 1001
            D+KLAL SRLLQR ++ ++FG+++  + I RT E+KP++  +      G+++P+  +WN+N+SHHG  VAIAS+   L GVD+V    R + +    ++ R F DHF   EWE I+   D+  +  RFY  W LKEAY+KA+G GLG+ L R  FV
Sbjct:   47 DQKLALASRLLQRQLIHELFGVKYDTIAIARTPENKPYWNRL------GNLAPI--SWNYNVSHHGTVVAIASDSRALVGVDVVRLTDRPHRKTSIGEFFRAFADHFNPGEWEYIRGATDEDGRYTRFYRLWSLKEAYIKAVGIGLGFSLLRAEFV 194
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: A0A251UBQ3_HELAN (Putative 4'-phosphopantetheinyl transferase superfamily n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UBQ3_HELAN)

HSP 1 Score: 141 bits (355), Expect = 1.270e-33
Identity = 76/164 (46.34%), Postives = 98/164 (59.76%), Query Frame = 3 
Query:  534 DRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFVPGDWVDLC 1025
            DRK AL SRLLQ A+V +V GL F E+ I RT E KP+            ++    N+NFN+SHHG YVAIASEP CL G+DIV       E   A D++R F+ +F+  EWE I +   D + L  F+ +W LKEA+VKA+G G+GY L    F   DW D+C
Sbjct:   72 DRKRALVSRLLQYALVHQVVGLPFDEIVINRTPEGKPYL--------EKHLNVKFPNFNFNVSHHGDYVAIASEPICLVGLDIVSCFIPGKES--ASDFIRNFSSYFSSSEWEKIVNAGSDDNVLDTFFRYWCLKEAFVKALGTGVGYKLDYVEFHHKDWTDIC 225
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: A0A833T409_PHYIN (4'-phosphopantetheinyl transferase domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T409_PHYIN)

HSP 1 Score: 139 bits (351), Expect = 2.070e-33
Identity = 69/156 (44.23%), Postives = 95/156 (60.90%), Query Frame = 3 
Query:  534 DRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFV 1001
            D+KLAL SRLLQR ++ ++FG+ +  +DI RT E+KP++            +P   +WNFN+SHHG  V IAS+   L GVD+V    R + +   +D+ R FT HF   EWE I+   D+  +  RFY  W LKEAY+KA+G GLG+ L R  FV
Sbjct:   42 DQKLALASRLLQRQLIHELFGVEYDTIDIARTPENKPYW-------NRPPGNPAPSSWNFNVSHHGTIVTIASDARSLVGVDVVRLTDRPHRKTSIEDFFRAFTGHFNPGEWEYIRGAEDEDRQYIRFYKLWSLKEAYIKAVGIGLGFSLLRAEFV 190
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: D0NCV0_PHYIT (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NCV0_PHYIT)

HSP 1 Score: 137 bits (345), Expect = 2.440e-33
Identity = 69/155 (44.52%), Postives = 97/155 (62.58%), Query Frame = 3 
Query:  534 DRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSF 998
            D+KLAL SRLLQR ++ ++FG+ +  +DI RT E+KP++  +      G+ +P   +WNFN+SHHG  V IAS+   L GVD+V    R + +   +D+ R FT HF   EWE I+   D+  +  RFY  W LKEAY+KA+G GLG+ L R  F
Sbjct:   42 DQKLALASRLLQRQLIHELFGVEYDTIDIARTPENKPYWNRLP-----GNPAP--SSWNFNVSHHGTIVTIASDARSLVGVDVVRLTDRPHRKTSIEDFFRAFTGHFNPGEWEYIRGAEDEDRQYIRFYKLWSLKEAYIKAVGIGLGFSLLRAEF 189
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: A0A662Y2W1_9STRA (ACPS domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2W1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.200e-33
Identity = 74/161 (45.96%), Postives = 100/161 (62.11%), Query Frame = 3 
Query:  534 DRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKS--PVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFVPGD 1010
            D+KLAL SRLLQR +V ++F +    ++IRRT E+KPF+     A   GSV+P    WN+N+SHHG  VAIASE   L GVD+V    R + +   +++ R F  HF   EW+ I+   PVD+  +  RFY  W LKEAY+KA+G GLG+ L R  F+  D
Sbjct:   43 DQKLALASRLLQRQLVRELFDVSVDAIEIRRTPENKPFWKRPETA---GSVAP--STWNYNVSHHGTIVAIASEFRELVGVDVVRLSDRPHRKTSVEEFFRAFEGHFNPSEWDYIRGVDPVDEDGQYSRFYRLWSLKEAYIKAVGIGLGFSLLRAEFIRAD 198
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: A0A803NVX8_CANSA (ACPS domain-containing protein n=4 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NVX8_CANSA)

HSP 1 Score: 139 bits (351), Expect = 4.410e-33
Identity = 74/163 (45.40%), Postives = 98/163 (60.12%), Query Frame = 3 
Query:  534 DRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFVPGDWVDL 1022
            DRK AL SRLLQ A+V +V G+ + E+ I+RT E KP+       +ENG V     N+NFN SHHG YVAIASEP CL G+DIV       E    +D++R F+ +F+  EW+ I S       L  F+ +W LKEAYVKA+G G+ YDL    F   +W ++
Sbjct:   49 DRKRALVSRLLQYALVHQVLGIPYDEIVIKRTPEGKPY-------LENGKVGEEFPNFNFNASHHGDYVAIASEPLCLVGLDIVSLVIPWRET--VEDFIRSFSSYFSRLEWDNIVSAGTSNDVLAEFFRYWSLKEAYVKALGSGVSYDLENVEFHHCNWKNI 202
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: A0A6A4CUU4_9STRA (ACPS domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CUU4_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.070e-33
Identity = 67/156 (42.95%), Postives = 94/156 (60.26%), Query Frame = 3 
Query:  534 DRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFV 1001
            D+KLAL SRLLQR ++ ++FG+ +  +DI RT E+KP++       +  + SP    WN+N+SHHG  VAI S+   L GVD+V    R   +   D++ R F DHF   EW  I+   D+  +  RFY  W LKEAY+KA+G GLG+ L R  F+
Sbjct:   46 DQKLALASRLLQRQLIHELFGVDYDAIDIARTPENKPYW-------KRPAESPAPPWWNYNVSHHGTIVAIVSDSRALVGVDVVQITDRPKRKTSVDEFFRAFADHFNPGEWRYIRETEDEDGQYSRFYRLWSLKEAYIKAVGIGLGFSLLRAEFI 194
[Close]
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Match: A0A6I9TGS1_SESIN (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TGS1_SESIN)

HSP 1 Score: 138 bits (348), Expect = 5.820e-33
Identity = 76/163 (46.63%), Postives = 97/163 (59.51%), Query Frame = 3 
Query:  534 DRKLALGSRLLQRAVVSKVFGLRFQEVDIRRTSESKPFFAGVVKAVENGSVSPLLKNWNFNLSHHGKYVAIASEPTCLCGVDIVDTKRRANEQGPADDYLRYFTDHFTDDEWETIKSPVDDTSKLRRFYLHWGLKEAYVKAIGQGLGYDLRRTSFVPGDWVDL 1022
            DRK AL SRLLQ A+V +V G+ F ++ IRRT E KPF  G     EN  +     N+NFN SHHG YVAIASEP CL GVDIV      NE   AD +++ F+ +F+  EW  I +       L+ FY +W LKE++VKA+G G+GY L    F    W D+
Sbjct:   47 DRKRALVSRLLQYALVHQVLGITFDDIVIRRTPEGKPFLVG-----ENVKLG--FPNFNFNASHHGDYVAIASEPICLVGVDIVSHSIPVNET--ADKFIQSFSSYFSSLEWYCILNAGSSDEMLKTFYRYWSLKESFVKAMGSGVGYKLDEVEFHHKSWDDI 200
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig11.810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCW1_9PHAE7.410e-15664.87ACPS domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LR25_ECTSI1.950e-10963.174\'-phosphopantetheinyl transferase superfamily pr... [more]
W2R8Y1_PHYPN1.260e-3343.59ACPS domain-containing protein n=10 Tax=Phytophtho... [more]
A0A251UBQ3_HELAN1.270e-3346.34Putative 4'-phosphopantetheinyl transferase superf... [more]
A0A833T409_PHYIN2.070e-3344.234'-phosphopantetheinyl transferase domain-containi... [more]
D0NCV0_PHYIT2.440e-3344.52L-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
A0A662Y2W1_9STRA4.200e-3345.96ACPS domain-containing protein n=2 Tax=Nothophytop... [more]
A0A803NVX8_CANSA4.410e-3345.40ACPS domain-containing protein n=4 Tax=Cannabis sa... [more]
A0A6A4CUU4_9STRA5.070e-3342.95ACPS domain-containing protein n=3 Tax=Phytophthor... [more]
A0A6I9TGS1_SESIN5.820e-3346.63L-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig11contigP-lacustris_contig11:98791..106195 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog description4'-phosphopantetheinyl transferase superfamily
Ec32 orthologEc-06_004620.1
Exons8
Model size2157
Cds size561
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig11.810.1prot_P-lacustris_contig11.810.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig11 99299..100631 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815379.1672664-UTR-P-lacustris_contig11:98790..992981622815379.1672664-UTR-P-lacustris_contig11:98790..99298Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 98791..99298 -
1693493510.1104364-UTR-P-lacustris_contig11:98790..992981693493510.1104364-UTR-P-lacustris_contig11:98790..99298Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 98791..99298 -
1622815379.2090554-UTR-P-lacustris_contig11:100631..1008361622815379.2090554-UTR-P-lacustris_contig11:100631..100836Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 100632..100836 -
1693493510.1441584-UTR-P-lacustris_contig11:100631..1008361693493510.1441584-UTR-P-lacustris_contig11:100631..100836Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 100632..100836 -
1622815379.2195344-UTR-P-lacustris_contig11:101687..1018031622815379.2195344-UTR-P-lacustris_contig11:101687..101803Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 101688..101803 -
1693493510.152338-UTR-P-lacustris_contig11:101687..1018031693493510.152338-UTR-P-lacustris_contig11:101687..101803Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 101688..101803 -
1622815379.2350392-UTR-P-lacustris_contig11:102471..1026031622815379.2350392-UTR-P-lacustris_contig11:102471..102603Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 102472..102603 -
1693493510.1610088-UTR-P-lacustris_contig11:102471..1026031693493510.1610088-UTR-P-lacustris_contig11:102471..102603Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 102472..102603 -
1622815379.2484593-UTR-P-lacustris_contig11:103450..1034981622815379.2484593-UTR-P-lacustris_contig11:103450..103498Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 103451..103498 -
1693493510.1724205-UTR-P-lacustris_contig11:103450..1034981693493510.1724205-UTR-P-lacustris_contig11:103450..103498Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 103451..103498 -
1622815379.3478084-UTR-P-lacustris_contig11:103908..1040291622815379.3478084-UTR-P-lacustris_contig11:103908..104029Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 103909..104029 -
1693493510.179922-UTR-P-lacustris_contig11:103908..1040291693493510.179922-UTR-P-lacustris_contig11:103908..104029Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 103909..104029 -
1622815379.3596106-UTR-P-lacustris_contig11:104585..1049631622815379.3596106-UTR-P-lacustris_contig11:104585..104963Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 104586..104963 -
1693493510.1873193-UTR-P-lacustris_contig11:104585..1049631693493510.1873193-UTR-P-lacustris_contig11:104585..104963Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 104586..104963 -
1622815379.370752-UTR-P-lacustris_contig11:106107..1061951622815379.370752-UTR-P-lacustris_contig11:106107..106195Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 106108..106195 -
1693493510.1946456-UTR-P-lacustris_contig11:106107..1061951693493510.1946456-UTR-P-lacustris_contig11:106107..106195Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig11 106108..106195 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815379.1856768-CDS-P-lacustris_contig11:99298..995411622815379.1856768-CDS-P-lacustris_contig11:99298..99541Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig11 99299..99541 -
1693493510.1246626-CDS-P-lacustris_contig11:99298..995411693493510.1246626-CDS-P-lacustris_contig11:99298..99541Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig11 99299..99541 -
1622815379.1968057-CDS-P-lacustris_contig11:100313..1006311622815379.1968057-CDS-P-lacustris_contig11:100313..100631Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig11 100314..100631 -
1693493510.1360471-CDS-P-lacustris_contig11:100313..1006311693493510.1360471-CDS-P-lacustris_contig11:100313..100631Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig11 100314..100631 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig11.810.1

>prot_P-lacustris_contig11.810.1 ID=prot_P-lacustris_contig11.810.1|Name=mRNA_P-lacustris_contig11.810.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=187bp
MRVSGGGSGVGTDSHTGLHNIGGGGGGGGQGDLGPPCGGNCTANLAEEKG
LRAEQVRWQGRQESGCDESGGHDGSSVRVIAAGECDYLAQEDSVGCTCGA
GDVTVKVDGVPRPDWTFKVFPLPDGYAACVARGPPSACSPSGQEAGVISD
TQAPRHGRSLPQLRFLKVRLEEIVPGEVARRLFGQG*
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mRNA from alignment at P-lacustris_contig11:98791..106195-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig11.810.1 ID=mRNA_P-lacustris_contig11.810.1|Name=mRNA_P-lacustris_contig11.810.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7405bp|location=Sequence derived from alignment at P-lacustris_contig11:98791..106195- (Pleurocladia lacustris SAG_25_93)
TGGGGAGGCAGGACGGAGCATTGCATGCAATCAAGGAGGACAGCTCCGCA
TCTCCCTGCATCATAGGGCAAATGAGCAGATTATACAGGTGAAGAATTCC
GGATCTTCCGCTTGCGACTACACTCTCTGTTCGTAGACACTGGTGACTGG
GTGGTGACCCAAACACAACCTTTAGTCTATGTGTATTCTTTAAATAGATA
CTGTAAACGAGTCATTTCGGAATCCTCTCAGTGACACTACTAGAGCAAAT
CTGCCAACTTTCTCCACATGGAATATCGTACGACTGCTACTTGAAGATGG
ATATTATCTGAAGTACTCAGTACAAATTGTATATTGAAGTTTGAGAGTGT
CAAATCTCAAGTACGTACTCCGAAGTACCATTATTGAAGTACAGGGACAA
AGTTTTACTTGGACGTATGCAGTATCCGTAAATTGTTTTTATGCACTGCT
GTAGTGCAGCAATTCGAGGATTCCGCAGAGGAAGAGATTGTGATAACACA
CACGACGGAGGGTTTCTCCGTGGAATGCCGCGGGGACGAGGGGGCAAACG
CGCGCGATGGTTTATTCTGCAGATATTCTGCTGTAGACTATAAGCCAATA
ACTCAGGCTTTTTTTAAGTTTCGAAGAGGACATCTCCCCCTCTTCGCCGC
GTCCATATGTGCATGGGGACTAAAGTTGTACGTTTTTACTTCCAGAGGGA
TTTTGTCAAGGCTGGATTCGCCAACTCCGCATGTCCACATACACTCTTTC
CTCAGCACCCCCCGCATCAGGGGAGACTGCGGTTTGGAACATGTTTTGGC
GTTTGTTTTCTGTGCCTAAGACTGACGTCTTCTCATTGGTCAACCGGTAG
CGCGGTGGATGCTTGTGCCGTACTAGGAAGACGGAGAGGTGATGCACATA
CATATGCTGTGGTGTGCTGTGTGTATGCGGTGTAACATGTGCTGAGGCAC
GCGGTGCCTTAATTGTGCCTCGATAGCTCGCTACATTGGAACCTTCTGTA
TAGTTGCGGGCTCTCTCGGGGGCGTAGTCCTTCGGCGATATGTATACTCC
CAGCAACTGGAACCAATGAGTATAAGCGCAGCCGACGCCCAGCACCACCC
CTTGCTCTCCCCATAAAATAGCAGTGACTCCATATAGCTCGTGATTCCCA
CCAAGACCGTCCCAAAACACATGAAGGCACAGCTCGTGATGCCTAGTCAC
GTGCTTACATCGGTTACATTCTTGATTTGCAGAGGCGGCGAACAAAATCA
CAGCAACCCCGCGGCTACAAACACACATACGCCTGCAACGGCGGTCGCCC
GGCCGCCCGGCGGTGTATGGCTTTCAAAATACGCACGTGCCTTTCTGCGG
TTGCCGCCGTGGAGAGGGGCGGCGGCTGCGGCGGCGGCGGCGGCGGCTGC
AGTCGTCACCATGGCACCGCAGCAACGGCAACGTGTCCCAAAATCCGAGC
GAGAACACAAAGATGTAGTGGTGCTTATTTGTTGGGTGGAGATGCGGACG
ACGATGAGGATGACGACCTGGAACCCCAGGCCGCCCAGAGTACTCTGCTG
TCGGGTGTGCAGAGGTGGTACCTGGACGTCAGCGAATGGGGCGAATTCTC
CACCTACCAGGTAGGGCAGGCAGTCTATGAGTTAACGGGTTGCTGTTACT
GCCGTCAAGGGCTAGAGAAGACAAACGTGCATACCCCCCTTCACCCGATC
CAACCTGCTTGCCCCGATCGCATCGCATTATAGCACTCCGGGGATCACTT
GTCTCTTGTCCCAAAACGCACACCCCACCGGAGCTCTTCGCCATGTTGCT
GAGCTGAGTTTTGCTGTACACGGCACATTTCTTCGCCGAACAGCGCGTTG
TGTTGTGCTGCGCATCTTGGTGGGTGCAAAACAAGAACACGGACAGCAGC
GAAACATAGCCCATGGCTGGTTGATTCATCGGGTCCCGACATGTGGGGGG
CCCGAGTGGGTCATTTCCTTCGACTCGCGGCTGGCTGCCGTGTTCCTCTG
CCACGCCTCGCCTCGCACGCTGTTGCCTTGTTCGCTCCCTCCGCCCTGCT
GCTGCTTTTTATTTTACCTCCCCATCGTCGGCTGCTCAGCTTCGAAGCCT
CCCCACCAGCCTCAAACACTTGCACTCCCTCTCTCGCATTTTTTCCTCCG
CAACGACGAACCAAAGTGGAATGGCCTCCTCGACCTACTACCCGGGGCTG
AGAGCGCTCGCGTGAGAGCCTTTTGAGGAGAATGACCGGAAACTGGCGCT
GGGGAGCCGCCTGCTTCAGCGAGCGGTGGTCTCCAAGGTGGATAAATAAT
ACTCGTATCCAAGCAAGCTCTACGCGCTGACCAAAGCGATAACACTTTGG
AAGTAGCGGTAGGCGTCCGCAAGTACTGTAGTACGAGGAGGAGGAAGACC
ACCGAGCCGTGTGCCCCGTTGTGTGGTGCCGTCTCGGCTGCACAATTGTA
GACAGCACGCGTGCACAGCAGACATGCGCATTTGCCTCTCTCCATCTTTC
TCGCTTGTGTGCTGCGTTGTAGGTTGGGGTCGTCGTTCTCAGGCACACCT
AACGGGTTGATTTCAACCCGGCTTGATTGTGAATGAGCTTGGTTCGCATG
CCGCAACATGATACATCTTACTCCTGCCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTTTCTCTCTCTTTCTCTCTCTCGATGTCTCCCTGGAGGTT
TTCGGACTCAGATTTCAAGAGGTCGACATCCGGCGAACCTCTGAGGTACT
TTGATCGAACGATCTTGTCAACTGAGAAAGCGAACAAAGTTTGTCAACTA
TGACCGCCATAACATCACCCTACTGCGGAGGTGGAGAAAACGCTCCCTCA
GCCTTGTTGCTGCATTTTTGACGGGTGCCCTTTAGCGGCATCAGTTGATT
TGGGTGGGTCGTTTGGCATGGGCAACGCACTCCACACATATCAGCAACGG
TGTCCAACGCTCATGCCCATCATCATGCAGTTTTGGAGACGATGGCGCTG
TTGTTGAGTTTCAGCTGTGTTCTCCTTCTCTCCCGCACACACACACACAA
ACACCAAACGCGGTCTCCCGCCAAGCGTGGCGATCCATGAGGGGGAGAGC
TTTTTCCCGTAGAAGTGGCATCGCTTTTTGTTTTGCCCTGTTGCACATGT
TGTTTGCCGGCCGTACCCTTGCAATAGTGTCGTTTGTGTTCACATGTACG
CTTGGGTTAGAGCTTGTGTGTGTTGTAAGGTGTGCTGCGGTACGCGTCAT
AACATCGGCCGGGCTTGACTCTCGGAATTCAAGAAGTTTTTCCCCGAAGC
GGTGTGCAGCAAGCGCTTTCAACGATACTAGTACGACCCAGGTTGTTTCG
CAGTGATGGGGGGTGCGGTAACCCATGTCTAAGATAGCATTCCCCACACT
CTCGCTTAAATCAACGCAGCAAACGGCTGCACGATTTTGCATACCTCCGG
TCGTCAATTCTGCGTGACGCAGTGCGTTCCGTCTCACTCCGCCCCATCGC
TTGGGTTCCACCAGTACCGTTTACCTCCCCCAACAACTATTCGCCACTAC
CCGCACACCGCCCGCCGCCCTCGAAAACAACCACAACCAAAGAGCAAACC
TTTCTTCGCCGGCGTGGTGAAGGCGGTCGAGAATGGCTCGGTGTCACCTC
TGCTCAAGAACTGGAACTTCAACCTCTCTCACCACGGAAAGTACGTCGCC
ATCGCGTCGGAACCCACATGCCTGGTGAGGACGAAAAAAAAAGAGAGAGA
AGGGCGCGAAGTGCAGGCACGAAACGACGCCCTGGCTCGTTGCTCGCTGC
TTGCTTGCTCGCTTATTCGGTCGGGGGAATTTCGCCTTCGCTGTCTGATA
CCTGTCCTCTTCGTTTGAAGGAAGCAGTCGATGTATGTTGGCAGAAGTGC
TTGGCACTCTGCCACGCAGAAGTGCTTGGCACTCTGCCACGCTCTGGAAG
CCTCGGCGCTGTGTTCATTGTGGAGGAGAATTTTGCGTCCGGTGGCTTTT
TTTCGCGTCGCACGGCCGTGCATGTAGCCTTGCATCAGGAGCCATCTGTC
TGTGGGGAGGAGGGAGGGGAATACCCTTGGCCTGATCATTTCATCGGTGT
TGTTCCCTCGATGAGGGATTGGATAGCTTTGAGTCGTGCAGGCTGATGGC
GTGGAGGTCCCAAACCAAGACCTCTCTCTGCCTTGCGGCACACAACCACC
ACCACCACTGCGATCACTGCCTCCGACAACCGCAACAATTTGAATCAGCA
AATTTACCCGATGCGCACAACTTTCGGCCAAGACGCCGAATGACGCCCGT
CCCGTCTTAACAGTTCCGTCCTGGTTCGATCGCTTACGTCCCATCCATCC
TTTGCACGTGCTTGTTGGGGTCACCCTGACTGGCATTGACAGTGCGGGGT
GGACATCGTGGACACGAAGCGGCGAGCAAACGAGCAAGGCCCCGCGGACG
ACTACCTACGGTACTTCACGGACCACTTCACGGACGACGAATGGGAAACG
ATCAAAAGGTGCGTGGGTGGGTGGGTGCGTGGGCGTCCTATGCGCAAAGC
CTCGGGGAACGCTACAGGAGCGTTCTCGATCCACGTGCTTACGGTTCCAG
GTGAAACGTCGGTACAGCATGCGCCCAACAAGCGAAAGATGAGAACGACA
AGGTCTGATTCCAGCGCTCGCCAAGGCGAATGAGTATCTTGTTGATGGGC
CGCAAGTTTGGGCGGTTTCTTGTCCTAGCCAGTGTGATCCCTAGGCTGCG
TGAAGGCTGTTGGCCTGAAGGGAGCAGTACTCGACGCCAGCAACGGTACG
TGTCGCACACTACATTTACCAACGCACCCCCTTGTCTGCAACAGGGGCAG
ACGCACAAGCTTTGCGCGCCAGCCTCGCCTCGGATCTTCCCCCACGAGCT
TCGATGCGTACGCTTTGTTGGGCGACAACGGTTTTCCGCGTGATGGATGG
TGTCGTTCGGTACTGCGCCCTTAGCCTTCGAGAAAATAAGTTTCTGCTCT
TTTTCTCCCCGTTGTGCATACCTCTACCCCGCTCTTGTGGTTCTAGCCTT
GCTCTTCGCGTTCGAACTTCCAGGAAAGCCCAAGGCTAGAACCACAAGAG
CGTGGTGTTGCACGAACTTCCAGGAAAACAGTGAGGCTCCTGCAATCGCT
AGGCGTCGGTTGCTCTGCCCGGCGTGTCTTTTTTCTTCGCAACCTGTCTT
TCGTGTTTTCAGTTTTCTTCGCAGCCCAGCTGTCCCGCCTCCTCTACTAC
ATCCTCGCCGGGAAGGGGCCTTTCGTTTGTACAACGCCATCGACGGTTTG
GGGTGCCGTGCCGCCGCGTGTCGTGACGGTATTCTCTGCCTCGTTTCCGT
CTTTCGCAGCCCTGTTGACGACACGAGCAAACTGCGGCGGTTCTACCTTC
ACTGGGGGCTGAAGGAGGCCTACGTCAAAGCCATCGGGCAGGGACTAGGA
TACGACCTGCGGCGAACCTCTTTCGTGCCTGGTGACTGGGTCGACTTGTG
CAGCCCCAAGCCGCAGCAGCAACGACGGCGACTCCCCGCCGCTTCGTGTA
CCGCCGCGGCCGGCATGCGAGTAAGCGGTGGTGGTAGTGGGGTCGGTACC
GATAGCCACACTGGTTTACACAACATCGGAGGCGGCGGCGGCGGCGGCGG
CCAAGGTGACTTGGGTCCGCCCTGCGGGGGTAATTGCACTGCGAATCTTG
CGGAGGAAAAGGGTTTAAGGGCGGAGCAAGTGCGATGGCAAGGAAGACAG
GAAAGCGGCTGCGACGAAAGCGGTGGCCACGATGGTAGTAGCGTGCGTGT
GATCGCAGCGGGAGAATGCGACTATTTGGCACAGGAGGACAGCGTGGGGT
GCACGTGCGGGGCAGGGGATGTTACGGTCAAGGTGAGAGAGGATTTGTGT
GGCTTGTGTTTTGGGAAATGCTGCTGCTGTTGAGGTGCCGCTGGTTGCTG
TCTCGCAAGCTTTTTTTTTTTTTTTTCTCTTCGACCTGCGATTATGTCTC
TACTTGCATCAATTGCCACCCGGATTGACGGCGGGTCGATGCGTAACAGA
GTGCTGAAGTTGGGCATTATCTGTATTTTTCTAGAGCTTGTCAAGCGGAT
CCCTTGCGCAAACGATATAGGAAGCTGACTTGGCACATTAGCAGGCCGTG
CGGATCCAAAATTCGTACGGCGGAGGATGACTTCTTGGACTGTGTATCGA
TGCTGTCTCCAAGCGCTGGTAGAATTCGTGCACCCTTTTGATGCCTCGCG
GCCGCCTGAAGAGGACGTTCTCGTTCGGCTGTTTAGACGCTGGTCCGGAG
ACTCCTCGCAACAGCACACACCATATATCGTCCACAATGAACTTATAGAA
TTAATATCAGCTCGGTCGGGGTGCGGTATTATTTCCTTGCTATCCTCCGT
CGGTTTGACGCTGCTCCAGTGAGTGAGCCAGGAGAGCACTGATCCCACAG
AAATGATTGTCTCTTTGGCGCGGTTGAATTTTGGGTGGTGGGGGCCAGAA
AAAATAAGCCAAGCCCGGGCGGGGAGGGGGGTCCTTCGACTTTGGTCTCA
TTCTTTTTGTCGCTGCACCCCCGGCAACCCGAGTGTACATGCATGCAAAA
ATTTGATTGGCCACTTCCCCCCGCCACAACTGCGGACACCACCACCACAA
AAAGGTCGACGGCGTGCCGCGACCGGACTGGACGTTCAAGGTGTTCCCCC
TCCCGGACGGCTACGCCGCTTGCGTGGCGAGGGGGCCGCCGTCCGCGTGC
TCCCCCTCGGGCCAAGAGGCCGGGGTAATCTCGGACACGCAGGCGCCCAG
GCATGGACGGTCCCTGCCGCAACTAAGGTTCCTAAAAGTCAGGCTGGAGG
AAATTGTTCCAGGCGAAGTGGCGAGGAGACTGTTTGGCCAGGGGTGACCA
TAGATTGCCCATGCTGCTGCTGCTGCTGCTGCTCCTGCTGCAGAGCTATG
CTGTTGTGTTGGTACTTCTTGCGGGCCCCCATTCTAGTACAGAACTGGTG
ATGAGGGTCCTAGCGGCCTGAGAGTGAAATCCTGGATGGTTTAGAGCAAG
TGTGTGCTGGTGCAACCTGGACAGCATTTAAGGTCGTTGTCCACGTGAGC
GTGAGAGTCATAGTGAAAGGCGTTATATGATTTTGGGAAGGCGGGGATCG
CAGCTTCCAGTAAGGGTCGGCTGTGCAGAGCAATTTTCCTGCGTGAAAAG
GTAGTTGGCTGGTAGTTCGGGTGTCGGAGCGTGTTTGGGGTACCAAGCGG
CCGGTATGATATACGGAGCCTCTGGGTTTGTATGACATGTATGAGACGTT
ATCATGTTTGAGGTATGAGACTGACGATTTGTGAGTGACGGAGCCCCCTT
GAGCTTTGGCCCTCGCGGTCACTGCTTTTTTAAGGATCAAATACGTCAAG
CGACA
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Coding sequence (CDS) from alignment at P-lacustris_contig11:98791..106195-

>mRNA_P-lacustris_contig11.810.1 ID=mRNA_P-lacustris_contig11.810.1|Name=mRNA_P-lacustris_contig11.810.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1122bp|location=Sequence derived from alignment at P-lacustris_contig11:98791..106195- (Pleurocladia lacustris SAG_25_93)
ATGCGAGTAAGCGGTGGTGGTAGTGGGGTCGGTACCGATAGCCACACTGG
TTTACACAACATCGGAGGCGGCGGCGGCGGCGGCGGCCAAGGTGACTTGG
GTCCGCCCTGCGGGGGTAATTGCACTGCGAATCTTGCGGAGGAAAAGGGT
TTAAGGGCGGAGCAAGTGCGATGGCAAGGAAGACAGGAAAGCGGCTGCGA
CGAAAGCGGTGGCCACGATGGTAGTAGCGTGCGTGTGATCGCAGCGGGAG
AATGCGACTATTTGGCACAGGAGGACAGCGTGGGGTGCACGTGCGGGGCA
GGGGATGTTACGGTCAAGATGCGAGTAAGCGGTGGTGGTAGTGGGGTCGG
TACCGATAGCCACACTGGTTTACACAACATCGGAGGCGGCGGCGGCGGCG
GCGGCCAAGGTGACTTGGGTCCGCCCTGCGGGGGTAATTGCACTGCGAAT
CTTGCGGAGGAAAAGGGTTTAAGGGCGGAGCAAGTGCGATGGCAAGGAAG
ACAGGAAAGCGGCTGCGACGAAAGCGGTGGCCACGATGGTAGTAGCGTGC
GTGTGATCGCAGCGGGAGAATGCGACTATTTGGCACAGGAGGACAGCGTG
GGGTGCACGTGCGGGGCAGGGGATGTTACGGTCAAGGTCGACGGCGTGCC
GCGACCGGACTGGACGTTCAAGGTGTTCCCCCTCCCGGACGGCTACGCCG
CTTGCGTGGCGAGGGGGCCGCCGTCCGCGTGCTCCCCCTCGGGCCAAGAG
GCCGGGGTAATCTCGGACACGCAGGCGCCCAGGCATGGACGGTCCCTGCC
GCAACTAAGGTTCCTAAAAGTCAGGCTGGAGGAAATTGTTCCAGGCGAAG
TGGCGAGGAGACTGTTTGGCCAGGGGTGAGTCGACGGCGTGCCGCGACCG
GACTGGACGTTCAAGGTGTTCCCCCTCCCGGACGGCTACGCCGCTTGCGT
GGCGAGGGGGCCGCCGTCCGCGTGCTCCCCCTCGGGCCAAGAGGCCGGGG
TAATCTCGGACACGCAGGCGCCCAGGCATGGACGGTCCCTGCCGCAACTA
AGGTTCCTAAAAGTCAGGCTGGAGGAAATTGTTCCAGGCGAAGTGGCGAG
GAGACTGTTTGGCCAGGGGTGA
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