prot_P-lacustris_contig1092.761.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1092.761.1
Unique Nameprot_P-lacustris_contig1092.761.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length105
Homology
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6H5K948_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K948_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.260e-19
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    2 VEGREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLKVR----GLETSLPIMIG 95
            + GREV +P+IDE+ TP+ACK +RH+P  ADIIN   D+ +E G+I    S WC+ +V+  K NGK RL  D+R LN L K      G   S+P  +G
Sbjct:   53 LHGREVEIPLIDEDVTPIACKQQRHNPIHADIINRQVDQWKELGIIDYSDSQWCSRIVMQQKKNGKPRLTIDHRALNELTKKSSGGIGTLASMPDRVG 150          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6H5JF70_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF70_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.030e-18
Identity = 42/79 (53.16%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    4 GREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLK 82
            GR+V LP+IDE+ TP+ACKA+R SP  ADI+    ++   AG  R  TSSWC+ +V  PKS+G +R+C DYR LN L+K
Sbjct:   75 GRKVGLPLIDEDVTPIACKAQRWSPPMADILMKQLNQGLAAGTFRLSTSSWCSRIVPVPKSDGTYRICIDYRDLNKLIK 153          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 5.190e-18
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    1 MVEGREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLK--VRGL 86
            ++EGREV+LP+ DEN  P +CKA+R SP  +DI+    +++ EAG++   TS WCA +V   K +G +RLC DYR LN LL+  V GL
Sbjct:  705 VIEGREVTLPLYDENVKPFSCKAQRFSPQMSDILMKQINDILEAGILSFATSEWCARIVPVLKKDGTYRLCIDYRELNKLLQKNVNGL 792          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6H5KW13_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW13_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.470e-17
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    1 MVEGREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLK--VRGL 86
            ++EGREV+LP+ DEN  P ACKA+R SP  +DI+    +++ EAG++   TS WCA +V   K +G +RLC D+R LN LL+  + GL
Sbjct:  927 VIEGREVTLPLYDENVKPFACKAQRISPHMSDILMKQINDMLEAGILSFSTSEWCARIVPVLKKDGTYRLCIDFRELNKLLQKNINGL 1014          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6H5KHG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG6_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.320e-17
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 VEGREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNL 80
            + GREVS+P+ D NATP+ACK +R  P   DI+N   D+L E G++    S WC+ + L PK +G  R+  DYR LNNL
Sbjct:  798 IHGREVSIPLKDPNATPIACKQQRLPPQSQDILNSTVDKLHEQGIVEYADSQWCSRVSLQPKKDGGTRMTLDYRPLNNL 876          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6H5KGS7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS7_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 8.360e-17
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    1 MVEGREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLK--VRGL 86
            ++ GREV LP+ DEN  P ACKA+R SP  ++I+    DE+ EAG++   TS WCA +V   K +G +R+C DYR LN  L+  V GL
Sbjct:  807 VIAGREVELPLYDENVKPFACKAQRFSPHMSNILMEQIDEMLEAGILSFATSEWCARIVPVLKKDGTYRICIDYRELNKRLRKNVNGL 894          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.110e-16
Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    4 GREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLK 82
            GREV +P+IDEN TPVACK ++++P +A+I+N  AD   E GVIR  TS+WC+   +  K +G  R+  DYR LN + K
Sbjct:  106 GREVPIPLIDENVTPVACKQQQYNPVQAEIVNDQADLWLETGVIRYSTSAWCSRTSIVKKKDGSNRVTIDYRPLNAVTK 184          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6H5JAJ3_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.310e-12
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    4 GREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLK 82
            GREV +P++DEN TPVACK ++++P +A+I N   D   + GV+RR +S WC+   +  K  G  R+  DYR LN + K
Sbjct:  914 GREVPIPLVDENVTPVACK-QQYNPIQAEIANKQVDLWLKTGVVRRASSVWCSRTSIVKKKAGSNRVAVDYRPLNAVTK 991          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6L2KSZ1_TANCI (Reverse transcriptase n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2KSZ1_TANCI)

HSP 1 Score: 65.9 bits (159), Expect = 3.650e-11
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 0
Query:    9 LPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLKVRGLETSLPIMI 94
            +P++D N  P+  +  RH  ++ D I  I  EL ++GVIR   S + +P+V+  K +G WR+C DYR LNN    + ++  LPI +
Sbjct:   70 IPLLD-NTAPINIRPYRHPLSQKDAIEKIVKELLDSGVIRASHSPFSSPIVMVKKKDGSWRMCVDYRALNN----KTMKDKLPIPV 150          
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Match: A0A6L2J6C9_TANCI (Chromo domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2J6C9_TANCI)

HSP 1 Score: 68.2 bits (165), Expect = 3.770e-11
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   11 VIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRFTSSWCAPLVLAPKSNGKWRLCQDYRGLNN 79
            ++ E  TP++ +  R+   + DII     EL EAGVIR   SS+ AP+VL  K +G+WR+C DYR LN+
Sbjct:  230 ILKEGTTPISQRPYRYPAIQKDIIKRTTRELLEAGVIRNSQSSFAAPVVLVKKKDGQWRMCMDYRRLND 298          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1092.761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K948_9PHAE2.260e-1945.92Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JF70_9PHAE1.030e-1853.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3V4_9PHAE5.190e-1848.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW13_9PHAE2.470e-1747.73Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KHG6_9PHAE3.320e-1748.10Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KGS7_9PHAE8.360e-1747.73Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LHQ7_9PHAE2.110e-1649.37Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JAJ3_9PHAE1.310e-1244.30RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6L2KSZ1_TANCI3.650e-1137.21Reverse transcriptase n=1 Tax=Tanacetum cinerariif... [more]
A0A6L2J6C9_TANCI3.770e-1144.93Chromo domain-containing protein n=1 Tax=Tanacetum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 6..94
e-value: 1.0E-18
score: 69.5
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 14..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1092contigP-lacustris_contig1092:23246..23560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1092.761.1mRNA_P-lacustris_contig1092.761.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1092 22385..23755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1092.761.1 ID=prot_P-lacustris_contig1092.761.1|Name=mRNA_P-lacustris_contig1092.761.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=105bp
MVEGREVSLPVIDENATPVACKARRHSPAEADIINGIADELQEAGVIRRF
TSSWCAPLVLAPKSNGKWRLCQDYRGLNNLLKVRGLETSLPIMIGCTGAS
SSPS*
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