prot_P-lacustris_contig1087.720.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1087.720.1
Unique Nameprot_P-lacustris_contig1087.720.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length458
Homology
BLAST of mRNA_P-lacustris_contig1087.720.1 vs. uniprot
Match: A0A6H5L0A8_9PHAE (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A8_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 1.120e-147
Identity = 273/461 (59.22%), Postives = 332/461 (72.02%), Query Frame = 0
Query:    4 RSGCPSSS--LRMACLVFAGGLGVAGAFLTPA-RLTVEGERLLGATVLGAAGTDVSSRQRFETNPADVASRIGILRDQIRDAIWEATDSIANAVEAMPNVGVHTNKTLSRLGVMVEKIDDEYFSKYLSFGSTPAFQETLAAVPSATLEREAGTGVGVAKPFTGGKKPIEKGKDKLSSSA---SVTASSKISRAAGXXXXXXXXXXXXAVVAESFAFKQEEME-ASRSKAGTVKLDRPKQVQDVFDEVQKKAVKYYKSNIAAPFSSKDGVAKGEGETPLPEVMQALEAKLESLLEESKFNPRKLKKDQKSQLVEAIRAMEASYPADANPLQSPELSGQWSVVYSSSSRLLGRALRGVLTAFFKTSDPRQVVDTGASSVLNACRARLRLTPLAIRVAKKGTYRATAGRKVLVEMPPTKKGWLRRMLPSLRAGKVEAEVTYLSNNWRVCRACGATVAFRKSGGD 457
            RS C SS   + M  L+ AG LG  GAF+ P  + T E     G   +GAAGT+ +S +   T   D +S+  +LRDQ+RDAIW+ATDSI +AVE MP+V  +TN++L +LG +VE ID+ YFSKY++ G+TPA+++TLAA  + T     GTGV ++K    G KP     DK++  A   + TASS  S+A  XXXXXXXXXXXX            +   A    +GTVKLDRPK+VQ VFD+VQKKAV +YK++  A   S+D  A+G    P+ E  + LE KLESLL ES F PRKLKKD+KSQLV+AI+AME SYPA ANPL  P LSGQWSVVYSSSSRLLGR ++G+ + FFKTSD RQVVDTGASSVLNACRARLRLTPLA+RVAKKG+YR TA RKVLVEMPPTKKG LRR+LPSLRAGKVEAEVTYLS+ WR+CRA G T+AFRKSGG+
Sbjct:    6 RSVCTSSRRLVGMHILIVAGLLGQTGAFMAPTGKPTAERGLERGVKAIGAAGTEAASSKSTSTGSTDASSKTLLLRDQLRDAIWKATDSITHAVEGMPDVMANTNESLLKLGTLVENIDERYFSKYVAVGATPAYKDTLAAAAT-TTSGATGTGVSMSK----GGKP-----DKMTEEAEGLASTASSDASKAXXXXXXXXXXXXXXXXXXXXXXXXDAKAAVAEEGSSGTVKLDRPKEVQGVFDDVQKKAVDFYKTSSGAMSKSQD--AEGGAVAPMSEAAKTLETKLESLLSESNFKPRKLKKDKKSQLVDAIKAMEESYPAGANPLADPALSGQWSVVYSSSSRLLGRVIKGLFSGFFKTSDRRQVVDTGASSVLNACRARLRLTPLALRVAKKGSYRKTAERKVLVEMPPTKKGLLRRVLPSLRAGKVEAEVTYLSDKWRICRAGGVTLAFRKSGGE 454          
BLAST of mRNA_P-lacustris_contig1087.720.1 vs. uniprot
Match: D8LNG8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG8_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 8.030e-74
Identity = 163/316 (51.58%), Postives = 208/316 (65.82%), Query Frame = 0
Query:   34 RLTVEGERLLGATVLGAAGTDVSSRQRFETNPADVASRIGILRDQIRDAIWEATDSIANAVEAMPNVGVHTNKTLSRLGVMVEKIDDEYFSKYLSFGSTPAFQETLAAVPSATLEREAGTGVGVAKPFTGGKKPIEKGKDKLSSSASVTASSKISRAAGXXXXXXXXXXXXAVVAESFAFKQEEMEASRSK--AGTVKLDRPKQVQDVFDEVQKKAVKYYKSNIAAPFSSKDGVAKGEGETPLPEVMQALEAKLESLLEESKFNPRKLKKDQKSQLVEAIRAMEASYPADANPLQSPELSGQWSVVYSSSSRLLGR 347
            R T EG    G   +GAAGT+ SS +   + P DV+S+  +LRDQ+RDAIW+ATDSI +AVE MP+V  +TN++L +LG +VEKID+ YFSKY++ G+ P++++TLAA               VA    G    + K  + L+S    T SS +S+A  XXXXXXXXXXXX                +  +  +GTVKLDRPK+VQ VFD++QKKAV++YK++  A   S+D  A+G    P+ E  + LE KLESLL ES F PRKLKKD+KSQLV AI+AME SYPADANPL  P LSGQWSVVYSSSSR LGR
Sbjct:    6 RPTAEGGLERGVKAIGAAGTEASSSKSISSTPTDVSSKTLLLRDQLRDAIWKATDSITHAVEGMPDVTANTNESLLKLGTLVEKIDERYFSKYVTAGANPSYKDTLAAAAXXXXXXXXXXXXXVAASKGGKLDKMTKEAEGLAS----TVSSDVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEEGSSGTVKLDRPKEVQGVFDDIQKKAVEFYKTSSGAMSKSQD--AEGGAAAPMSEAAKTLETKLESLLSESNFKPRKLKKDKKSQLVAAIKAMEESYPADANPLADPALSGQWSVVYSSSSRGLGR 315          
BLAST of mRNA_P-lacustris_contig1087.720.1 vs. uniprot
Match: A0A836CKA5_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.230e-33
Identity = 137/469 (29.21%), Postives = 205/469 (43.71%), Query Frame = 0
Query:   49 GAAGTDVSSRQRFETNPADVASRIGILRDQIRDAIWEATDSIANAVEAMPNVGVHTNKTLSRLGVMVEKIDDEYFSKYLSFGSTPAFQETLAAVPS--------------------ATLEREAGTGVGVAK-----PFTGGKKPIEKGKDKLSSSASVTASSKISRAAGXXXXXXXXXXXXAVVAESFAFKQEEMEASRSKAGTVKLDRPKQVQDVFDEVQKKAVKYYKSNIAAPFSS---------------KDGVAKGEGETPLPEVMQA-LEAKLESLLEESKFNPRKLKKDQKSQL------------------VEAIRAMEASYPADANPLQSPELSGQWSVVYSSSSRLLGRALRGVLTAFFKTSDPRQVVDTGASSVLNACRARLRLTPLAIRVAKKGTYR-----ATAGRKVLVEMPPTKKGWLRRMLPSLRAGKVEAEVTYLSNNWRVCRACGATVAFRK 453
            G   T  +S Q   ++   V   +G   +++RDAI +A+D++ +AVE         +  L  LG M+ +++D+YF+   +   T ++  TL   P+                    A +  E  TG   A+     P      P+++    + S A    S+ ++  A             A  A++   KQ+      SKAG + L RP QVQ+V + +QK+AV  YK    A  +                   VA    E   P   +A LE +LE LL+ S  +P ++ +  ++ L                  V  + A+EAS P  A+PL SP L+G W++VYSSS  +   AL    +AFFK S P Q VD  A +VLN+   RLRLTPL +R  + GT+         G   +V      +G   R     R G     VTYLS  WR+CR+ G  +AFRK
Sbjct:   35 GYVNTMAASTQPDNSDAHTVVEEVG---EKLRDAIMDASDTVWSAVETKLAEAADIHP-LEDLGKMLMELEDKYFATSSAASPTSSYLSTLGGSPTPPPLNITAEPEEVITMEASVAEIAAELDTGAEAAEAIGGTPVPAVAAPVQEASATVGSEAKAVPSAAVATPA-------------APPAKATPAKQQ------SKAG-LDLQRPAQVQNVIESLQKRAVAMYKGAAQAASAGFVRDEDVPAVAVAAXXXXVADAMPEIAPPRASEAMLEKRLEDLLKTSDMSPARMSEQDQAALTTLHKSTRLTTHLHATHQVTTLEALEASTPPGAHPLHSPLLTGDWALVYSSSGSVFKAALGKKRSAFFKVSSPTQSVDAAAGTVLNSALLRLRLTPLRLRARQAGTFTLDKGSGAPGATAIVNFA---RGGFGRFAKLFRRGTAAVTVTYLSTGWRICRSDGVVLAFRK 476          
BLAST of mRNA_P-lacustris_contig1087.720.1 vs. uniprot
Match: D8LNG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG7_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 4.130e-18
Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = 0
Query:  408 MPPTKKGWLRRMLPSLRAGKVEAEVTYLSNNWRVCRACGATVAFRKSGG 456
            MPPTKKG LRR+LPSLRAGKVEAEVTYLS+ WRVCRA G TVAFRK+GG
Sbjct:    1 MPPTKKGLLRRVLPSLRAGKVEAEVTYLSDKWRVCRAGGVTVAFRKNGG 49          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1087.720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L0A8_9PHAE1.120e-14759.22PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
D8LNG8_ECTSI8.030e-7451.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836CKA5_9STRA2.230e-3329.21PAP_fibrillin domain-containing protein n=1 Tax=Tr... [more]
D8LNG7_ECTSI4.130e-1885.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 299..381
e-value: 2.2E-6
score: 27.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..457
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1087contigP-lacustris_contig1087:6953..25342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1087.720.1mRNA_P-lacustris_contig1087.720.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1087 6659..27125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1087.720.1 ID=prot_P-lacustris_contig1087.720.1|Name=mRNA_P-lacustris_contig1087.720.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=458bp
MMFRSGCPSSSLRMACLVFAGGLGVAGAFLTPARLTVEGERLLGATVLGA
AGTDVSSRQRFETNPADVASRIGILRDQIRDAIWEATDSIANAVEAMPNV
GVHTNKTLSRLGVMVEKIDDEYFSKYLSFGSTPAFQETLAAVPSATLERE
AGTGVGVAKPFTGGKKPIEKGKDKLSSSASVTASSKISRAAGAAAKSVSA
SAGAAVVAESFAFKQEEMEASRSKAGTVKLDRPKQVQDVFDEVQKKAVKY
YKSNIAAPFSSKDGVAKGEGETPLPEVMQALEAKLESLLEESKFNPRKLK
KDQKSQLVEAIRAMEASYPADANPLQSPELSGQWSVVYSSSSRLLGRALR
GVLTAFFKTSDPRQVVDTGASSVLNACRARLRLTPLAIRVAKKGTYRATA
GRKVLVEMPPTKKGWLRRMLPSLRAGKVEAEVTYLSNNWRVCRACGATVA
FRKSGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom