prot_P-lacustris_contig1082.696.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1082.696.1
Unique Nameprot_P-lacustris_contig1082.696.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length44
Homology
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BLAST of mRNA_P-lacustris_contig1082.696.1 vs. uniprot
Match: D8LD02_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD02_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 7.750e-12
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0 
Query:    1 MKGTSESGRMGEGSYLSEEQREHFREKGYLVLPDWWSKQ 39
            M+GT E+   GEG +LSEEQREHF EKGYLVLPDWWSKQ
Sbjct:    1 MEGTGENKGAGEGKFLSEEQREHFNEKGYLVLPDWWSKQ 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1082.696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD02_ECTSI7.750e-1276.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 12..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1082contigP-lacustris_contig1082:18955..19982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1082.696.1mRNA_P-lacustris_contig1082.696.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1082 18955..19982 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1082.696.1 ID=prot_P-lacustris_contig1082.696.1|Name=mRNA_P-lacustris_contig1082.696.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=44bp
MKGTSESGRMGEGSYLSEEQREHFREKGYLVLPDWWSKQASML*
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