prot_P-lacustris_contig108.685.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig108.685.1
Unique Name	prot_P-lacustris_contig108.685.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	571

Homology

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BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: D8LKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD5_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 6.580e-94
Identity = 233/389 (59.90%), Postives = 257/389 (66.07%), Query Frame = 0

Query:    1 MSSLHIPPFGGQAPASSSXXXXXGRERGAHGGMXXXXXXXXXXGH----GLRKPASPARRWGGIGGGSKTAAIAIGGKAPRLPAVPADDGKPMSRQLSRSYFVPRSLEGYERHLRQIHCEGYLQRQSRTTGTWRRRWFLLKDGHLSYFQDQEEAEEYRSKEGGSQFRHHPSSQRQLSLDCVEAVRTEEKIGPLVFRVISSHRDDLVLRAETKEAMNDWLFGFHRALASIIARVIESKQG---TESRFEAGGGPASAFWXXXXXXXXXXXXXXXXFGDGGRGDXVXXXXXXXXXRGGKGVEDANHNNGEDYDDDDS--VSFFTSPTPLLVPLQGEGGS-----------GACRHRRVASL-SDGRHRCADSLGCYNNSD-GGYADS-SYG 366
            MSS HIPP+GG            G   G  GG+ XXXXXXXXX      G ++ +SPARR GG          A+G           D+G+P+SRQLSRSYFVPRSLEGYERHLRQIHCEGYLQRQSRT+G WRRRWFLLKDG+LSYFQDQEEAE YRSKEGGSQF HHPSS RQLSLDCVEAVRTEEKI PLVFRVISSHRDDLVLRAE+KEAMNDWLFGFHRALASIIARV+ +K+G   +        GP  A  XXXXXXXXXX                XXXXXXXXX GG   +D       D +D+D   +   +S TPLL+PLQ EGG               RH RVASL +D R R  +SLGCY N   GGYADS SYG
Sbjct:    1 MSSFHIPPYGG-----------GGTRGGGRGGVSXXXXXXXXXXXXXXVGGKQTSSPARRRGG----------AVG-----------DEGRPVSRQLSRSYFVPRSLEGYERHLRQIHCEGYLQRQSRTSGAWRRRWFLLKDGYLSYFQDQEEAEGYRSKEGGSQFHHHPSSLRQLSLDCVEAVRTEEKIRPLVFRVISSHRDDLVLRAESKEAMNDWLFGFHRALASIIARVVGNKRGGGESXXXXXXXWGPTEAXXXXXXXXXXXX---------------XXXXXXXXXXEGGVVHDDGEAEATGDGNDEDGGGIGSVSSQTPLLLPLQAEGGPCGXXXXXXXXXXXXRHHRVASLCTDERRRRTESLGCYGNDGYGGYADSPSYG 342

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BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: A0A024GTT7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTT7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.800e-12
Identity = 49/140 (35.00%), Postives = 81/140 (57.86%), Query Frame = 0

Query:   94 SRSYFVPRSLEGYERHLRQIHCEGYLQRQS-RTTGTWRRRWFLLKDGHLSYFQDQEEAEEYRSKEGGSQFRHHPSSQRQLSLDCVEAVRTEEKIGPLVFRVISSHRDDLVLRAETKEAMNDWLFGFHRALASIIARVIES 232
            S SYF PR+L G       +H EG L++QS +    W++RWF+++   L Y++    A +  S +  +  R  P  +  + LD V++V T +  G   F++   HR   VLRAE+K+ M DWLF F R++A+II+ ++++
Sbjct:  586 SASYFQPRTLAG------PVHLEGCLEKQSVKNRSVWKQRWFVMQTSQLIYYKS---ARDVSSSDAITHPRP-PGCRGIIELDQVDSVTTAKDFGVGAFQIRCQHRK-YVLRAESKDRMQDWLFNFQRSIANIISMLLQT 714

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LKD5_ECTSI	6.580e-94	59.90	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A024GTT7_9STRA	3.800e-12	35.00	Uncharacterized protein n=1 Tax=Albugo candida Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 113..225 e-value: 1.2E-14 score: 64.7
IPR001849	Pleckstrin homology domain	PFAM	PF00169	PH	coord: 114..221 e-value: 2.0E-13 score: 50.7
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 112..223 score: 15.799
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 106..231 e-value: 1.1E-18 score: 68.9
None	No IPR available	PANTHER	PTHR14336:SF8		coord: 110..225
None	No IPR available	PANTHER	PTHR14336	TANDEM PH DOMAIN CONTAINING PROTEIN	coord: 110..225
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 102..229

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig108	contig	P-lacustris_contig108:200040..210074 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig108.685.1	mRNA_P-lacustris_contig108.685.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig108 187625..212794 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig108.685.1 ID=prot_P-lacustris_contig108.685.1|Name=mRNA_P-lacustris_contig108.685.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=571bp
MSSLHIPPFGGQAPASSSSGGGRGRERGAHGGMSSADAGGGGAGHGLRKP
ASPARRWGGIGGGSKTAAIAIGGKAPRLPAVPADDGKPMSRQLSRSYFVP
RSLEGYERHLRQIHCEGYLQRQSRTTGTWRRRWFLLKDGHLSYFQDQEEA
EEYRSKEGGSQFRHHPSSQRQLSLDCVEAVRTEEKIGPLVFRVISSHRDD
LVLRAETKEAMNDWLFGFHRALASIIARVIESKQGTESRFEAGGGPASAF
WEAGGGHEAARFSRGAGFGDGGRGDGVSEGGDGGSDRGGKGVEDANHNNG
EDYDDDDSVSFFTSPTPLLVPLQGEGGSGACRHRRVASLSDGRHRCADSL
GCYNNSDGGYADSSYGYGYGYGYGGGGHIIAGGVGGAAGAAPARPSLGGG
GGVVVGGGRIRCRVLDLRGARRAEGATSGTIFLTSSTWSRVMIEVGSILV
MPMMEIVTATSWVTAAGRTLGLSADLPLLLMLSTARDTCLRGRRPELGVR
SRINVRRRRDGRSRLDSHVSHIPGGHGAGPGDERGAALPAHCDSCSLCRS
GGLRQVHSSRTQRKVRWRRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001849	PH_domain
IPR011993	PH-like_dom_sf