mRNA_P-lacustris_contig108.685.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: A0A6H5KU51_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU51_9PHAE) HSP 1 Score: 570 bits (1468), Expect = 1.320e-183 Identity = 267/299 (89.30%), Postives = 288/299 (96.32%), Query Frame = 1
Query: 2647 VGLAQGFFGVYDGHCGSEAVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMRGRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP 3543
VGLAQG+FGVYDGHCGSEAVQ VRDRLHA++GEHP+FW++PKRA+RE+F+++DE FL LAGER+WYSGTTVL+ALMRGRKLLIGN+GDGEAVLCRGDD VHMSPVHDPARPCEH+RI+ ANGWVTTERELFLRQLKQMDLDDPQIRMAA+EHVRWT+ITRVCGELAVSRSIGDRDFKGFTKRRLEQGT+GVAP D+ PVLFAWPHGHSGEFHDDLLTAEPEFQE EIGLDDEFLLMACDGLWDVLGKREAVD+AKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP
Sbjct: 87 VGLAQGYFGVYDGHCGSEAVQNVRDRLHAVIGEHPSFWEEPKRAIRESFVSLDEQFLLLAGEREWYSGTTVLIALMRGRKLLIGNVGDGEAVLCRGDDVVHMSPVHDPARPCEHDRIIAANGWVTTERELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRLEQGTDGVAPEDM----PVLFAWPHGHSGEFHDDLLTAEPEFQEAEIGLDDEFLLMACDGLWDVLGKREAVDYAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP 381
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: D8LKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD5_ECTSI) HSP 1 Score: 478 bits (1230), Expect = 2.520e-142 Identity = 251/322 (77.95%), Postives = 271/322 (84.16%), Query Frame = 1
Query: 2476 GRGMGLATSARGSGFPWAPAKREVSPAAGARRIADPAAGEA--GAGVGVTGGNDGVGGEVGLAQGFFGVYDGHCGSEAVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMRGRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDE 3435
G GMGL S RGSGFPW PA RE S A + I D ++ E A VGVTG DGVGGEVGLAQG+FGVYDGHCGSEAVQYVRDRLHA+VGEHP+FWK+PKRA+RE+F+++DE FL LAGER+WYSGTTVLVALMRGRKLLIGN+GDGEAVLCRGDD VHMSPVHDP ELFLRQLKQMDLDDPQIRMAA+EHVRWT+ITRVCGELAVSRSIGDRDFKGFTKRR+EQGT+GVAP D+ PVLFAWPHGHSGEFHDDLLTAEPEFQE EIGLDDEFLLMACDGLWDVLGKREAVD+AKNFFDE
Sbjct: 645 GGGMGLRAS-RGSGFPWPPANREPSLAQLSWWI-DRSSPELVPRAEVGVTGIADGVGGEVGLAQGYFGVYDGHCGSEAVQYVRDRLHAVVGEHPSFWKEPKRAIRESFVSLDEQFLLLAGEREWYSGTTVLVALMRGRKLLIGNVGDGEAVLCRGDDVVHMSPVHDP--------------------ELFLRQLKQMDLDDPQIRMAATEHVRWTTITRVCGELAVSRSIGDRDFKGFTKRRVEQGTDGVAPEDM----PVLFAWPHGHSGEFHDDLLTAEPEFQEAEIGLDDEFLLMACDGLWDVLGKREAVDYAKNFFDE 940
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: A0A7S2REK4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REK4_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.530e-71 Identity = 141/292 (48.29%), Postives = 181/292 (61.99%), Query Frame = 1
Query: 2668 FGVYDGHCGSEAVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMR--GRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFD---EGMCSQAVAERMCELAYRMGTSDNVTVVIVQF 3528
+GVYDGHCGSEA LH + EH A P +R+AFL +D FL LA +R+ Y GTT +V L+ GR++ + N+GD AVLCRG V +S H P RP E ERI ANGW+T ERELF+ QL +MDL DP+IR AA E V+W +I+RVCGELAVSRSIGD DFKG G P + F +P GHS F DL+ AEP+ + E+ DEF+++A DGLWDVL ++ VD ++F E Q VA +C LA R+G++DN+TVV+V F
Sbjct: 503 YGVYDGHCGSEAADVAARDLHTYIFEHEALQTSPLTTLRDAFLRLDREFLELARDRNLYCGTTAIVMLLLDGGRRMFVSNVGDSAAVLCRGGQAVELSQSHKPDRPDEKERIAAANGWITEERELFMGQLHRMDLKDPKIRSAAEEVVQWVTISRVCGELAVSRSIGDPDFKGIA---------GPEPSQ-----DLFFCFPQGHSRTFSADLVIAEPDIESFEVSPGDEFVVLASDGLWDVLNGQQVVDAVRDFQQAEPESTLDQ-VAHHLCRLALRLGSADNITVVVVAF 779
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: W7TA28_9STRA (Protein phosphatase 1e n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA28_9STRA) HSP 1 Score: 249 bits (637), Expect = 1.110e-68 Identity = 138/322 (42.86%), Postives = 186/322 (57.76%), Query Frame = 1
Query: 2572 IADPAAGEAGAGVGVTGGNDGVGGEVGLAQGFFGVYDGHCGSEAVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMRGRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHF 3537
+A A+GE GA G+ +G G E + F+ +YDGHCG A +Y + R H + P F P+ AM +D+ L + + Y GTT ++ RGR + +GN+GD A+LCR +S P R E ERI +ANGWVT E ELF+ QL +MDL DP I A + V +I RVCG L+VSRSIGD DFKGF+ E+G G + E + FA+P GHSG FH DL+ A+PE ++ + D FLL+ACDG WDV+ + EAV A G+ VA ++ LA R+G+SDNVTVV+V F H+
Sbjct: 117 LAGVASGETGAAQGLP--KEGQG-EQAEMEAFYAIYDGHCGIGAARYAQQRTHHYLMADPLFVSSPEAAMVNVCRRLDKEVLEMCEQEGLYCGTTAILTFFRGRTVYVGNVGDCAAILCRDGKAFPLSSAQTPGRKDERERIERANGWVTEEMELFIGQLHRMDLADPSIAEAVDKKVAVNTIHRVCGNLSVSRSIGDPDFKGFSPHPGEEGLGGTEAGEAGEEDSI-FAFPPGHSGVFHGDLVIADPETRQITVSEADAFLLVACDGFWDVVDEEEAVAQATGLLAGGLGVSDVAAQLGNLALRLGSSDNVTVVLVVFEHW 434
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: A0A4D9CQ52_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ52_9STRA) HSP 1 Score: 243 bits (619), Expect = 5.530e-62 Identity = 130/313 (41.53%), Postives = 177/313 (56.55%), Query Frame = 1
Query: 2641 GEVGLAQG--------------FFGVYDGHCGSEAVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMRGRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHF 3537
GE+G AQG F+ +YDGHCG A +Y + + H + P F P+ AM +D+ L + + Y GTT ++ RGR + +GN+GD A+LCR +S P R E ERI +ANGWVT E ELF+ QL +MDL DP I A + V +I RVCG L+VSRSIGD DFKGF+ E+ G + E + FA+P GHSG F+ DL+ A+PE ++ + D FLL+ACDG WDV+ + EAV A G+ VA ++ LA R+G+SDNVTV++V F H+
Sbjct: 659 GEMGAAQGLPKEGQGEQAEMEAFYAIYDGHCGIGAARYAQQQTHHYLMADPLFVSSPEAAMVNVCRRLDKEVLEMCEQEGLYCGTTAILTFFRGRTVYVGNVGDCAAILCRDGKAFPLSSAQTPGRKDERERIERANGWVTEEMELFIGQLHRMDLADPSIAEAVDKKVAVNTIHRVCGNLSVSRSIGDPDFKGFSSHPGEESLGGTEAGEAGEEDSI-FAFPPGHSGVFYGDLVIADPETRQITVSEADAFLLVACDGFWDVVDEEEAVAQATGLLAGGLGVSDVAAQLGNLALRLGSSDNVTVLLVVFEHW 970
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: A0A835ZH46_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH46_9STRA) HSP 1 Score: 216 bits (549), Expect = 9.420e-61 Identity = 100/162 (61.73%), Postives = 121/162 (74.69%), Query Frame = 1
Query: 3058 MDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP 3543
MDL DP IR ASE V+WT+ITR CGEL+VSR+IGDRDFKGFT+RR+E GT GV P + P LF WP HSGEF+DDLL A P+F E EI +D+FLL+ACDGLWDVL +AV H D+G+C+Q A+++CELA R+GTSDNVTV+IV HH P
Sbjct: 1 MDLQDPVIRSMASEQVKWTTITRTCGELSVSRAIGDRDFKGFTRRRMEAGTRGVPPEN-----PALFLWPQNHSGEFYDDLLVAHPDFHEEEITDEDQFLLLACDGLWDVLSHGDAVKHTLELLDQGLCAQGAAQQLCELATRLGTSDNVTVIIVSLHHHPP 157
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: A0A2D4C4D2_PYTIN (Protein phosphatase 1E, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4D2_PYTIN) HSP 1 Score: 213 bits (541), Expect = 2.910e-58 Identity = 111/274 (40.51%), Postives = 158/274 (57.66%), Query Frame = 1
Query: 2701 AVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMRGRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIV 3522
A + ++L A +GEH AF + ++A + F +DE FL A G+T V L+RG KLL NLGD AV+ + + P R E RI + GW+ EREL + +L MDL DP+I+ A VRW +I RV GELAVSR+IGD D+KG + E +A+P GH +FH DL+T EPEF+E EI + +FL++ACDGLWD + +EAV+H ++EG + +++ + +LA R G+SDNV+VV+V
Sbjct: 5 AATFTNEKLLAYLGEHEAFMSNARQAFSDCFRRIDEEFLQRAASESLSDGSTAAVVLIRGNKLLTANLGDSRAVVSINGTALDVIEEQTPGRADERSRIERCGGWIKEERELQMSKLHSMDLSDPRIQQKAERVVRWVTIYRVNGELAVSRAIGDIDYKGQALQDYE-----------------FWAFPEGHDRKFHGDLVTCEPEFKEIEITPEVKFLILACDGLWDTITSQEAVNHVTEKWEEGWSATSISRSLADLAIRSGSSDNVSVVVV 261
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: F0WZ08_9STRA (Protein phosphatase 1E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZ08_9STRA) HSP 1 Score: 230 bits (587), Expect = 6.410e-58 Identity = 119/291 (40.89%), Postives = 168/291 (57.73%), Query Frame = 1
Query: 2659 QGFFGVYDGHCGSEAVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMRGRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFH 3531
Q + ++DGH G +A Q+ DRL A + H F+ + +RA E F +D+ FL A W +GTTV + +RG KLL N+GD AV+C G+D + + P R E +RI + GWV EREL + +L MDL DP+I+ A VRW I RV GELAVSR+IGD ++KG R L + +A+P GH FH DL+ PEF+E EI D FL++ACDGLWD + +EAV H + +G ++ + + LA R G+SDNV+V++V+F+
Sbjct: 732 QAIYALFDGHAGVQAAQFANDRLAAYICAHHDFYSNTRRAFDECFRRVDKEFLAQAAIEKWSAGTTVALVFIRGNKLLTANIGDSRAVVCLGEDALDVIEEQTPGRKDERDRIEQQGGWVKEERELHISKLHSMDLSDPRIKEKAERIVRWVHIYRVNGELAVSRAIGDLEYKG---RALSEY--------------AFWAFPEGHDRVFHGDLVIPVPEFKEIEITSDVAFLILACDGLWDTITSQEAVRHVRERLQKGETAEIASRSLANLAIRSGSSDNVSVIVVRFN 1005
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: K3WSY7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSY7_GLOUD) HSP 1 Score: 219 bits (557), Expect = 6.880e-56 Identity = 121/295 (41.02%), Postives = 159/295 (53.90%), Query Frame = 1
Query: 2659 QGFFGVYDGHCGSEAVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMRGRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFHHFRP 3543
Q + ++DGH G A ++ RL + + H AF D + A E F +D FL +A GTT V L+RG +LL N+GD AV G + + P R E ERI GWV EREL + +L MDL DP+I+ A V+W I RV GELAVSR+IGD D+KG + E +A+P GH EFH DL+ A PEFQE EI + EFL++ACDGLWD + +EAV H +EG +Q + + LA R G+SDNV+VVIV + P
Sbjct: 409 QSIYMLFDGHSGVRAAKFSEQRLLSYLRAHEAFMTDARLAFEECFHQIDTEFLEIAANESLSDGTTAAVVLIRGNRLLTANIGDSRAVASIGGQALDIIEEQTPGRVDERERIESRGGWVREERELHMSKLHSMDLSDPEIQQRAGRVVQWVDIFRVNGELAVSRAIGDIDYKGESLSSYE-----------------YWAFPDGHDREFHGDLIIAVPEFQEIEITPEFEFLILACDGLWDTITSKEAVRHVAARLNEGYSAQQASHSLANLAIRSGSSDNVSVVIVLLNTVPP 686
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Match: A0A024GTT7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTT7_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.530e-55 Identity = 117/291 (40.21%), Postives = 166/291 (57.04%), Query Frame = 1
Query: 2659 QGFFGVYDGHCGSEAVQYVRDRLHAMVGEHPAFWKDPKRAMREAFLAMDESFLTLAGERDWYSGTTVLVALMRGRKLLIGNLGDGEAVLCRGDDFVHMSPVHDPARPCEHERILKANGWVTTERELFLRQLKQMDLDDPQIRMAASEHVRWTSITRVCGELAVSRSIGDRDFKGFTKRRLEQGTNGVAPLDVREHIPVLFAWPHGHSGEFHDDLLTAEPEFQETEIGLDDEFLLMACDGLWDVLGKREAVDHAKNFFDEGMCSQAVAERMCELAYRMGTSDNVTVVIVQFH 3531
Q + ++DGH G +A Q+ DRL A + H F+ + +RA E F +D FL A W +GTT + +RG +LL N+GD AV+C G+D + + P R E ERI + GWV EREL + +L MDL DP+I+ A VRW I RV GELAVSR+IGD ++KG + E+ +A+P GH+ FH DL+ PEF+E EI D FL++ACDGLWD + +EAV H + G ++ + + LA R G+SDNV+V++V+F+
Sbjct: 951 QALYALFDGHAGVQAAQFASDRLAAYICAHDEFYGNIRRAFDECFRRVDREFLVQAAIEKWSAGTTAALVFIRGTQLLTANIGDSRAVVCLGEDALDVIEEQTPGRKDERERIEQQGGWVKEERELHISKLHSMDLSDPRIKEKAERIVRWVPIYRVNGELAVSRAIGDFEYKGRA---------------LAEY--AFWAFPEGHARVFHGDLVIPVPEFKEIEITPDVAFLILACDGLWDTITSQEAVRHVREKLKGGCTAEMASRSLANLAIRSGSSDNVSVIVVRFN 1224 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig108.685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig108.685.1 >prot_P-lacustris_contig108.685.1 ID=prot_P-lacustris_contig108.685.1|Name=mRNA_P-lacustris_contig108.685.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=571bp MSSLHIPPFGGQAPASSSSGGGRGRERGAHGGMSSADAGGGGAGHGLRKPback to top mRNA from alignment at P-lacustris_contig108:187625..212794- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig108.685.1 ID=mRNA_P-lacustris_contig108.685.1|Name=mRNA_P-lacustris_contig108.685.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=25170bp|location=Sequence derived from alignment at P-lacustris_contig108:187625..212794- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig108:187625..212794- >mRNA_P-lacustris_contig108.685.1 ID=mRNA_P-lacustris_contig108.685.1|Name=mRNA_P-lacustris_contig108.685.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3426bp|location=Sequence derived from alignment at P-lacustris_contig108:187625..212794- (Pleurocladia lacustris SAG_25_93)back to top |