prot_P-lacustris_contig1075.656.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1075.656.1
Unique Nameprot_P-lacustris_contig1075.656.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length240
Homology
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BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: D7G7Y3_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y3_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.040e-16
Identity = 110/267 (41.20%), Postives = 133/267 (49.81%), Query Frame = 0 
Query:    1 MAFDLHQARSKLVKAETLVKRWEKALT----KTKMQAPDRETTHPPSPS------------------DKDKLALARKLVKRNLANHAKDSNRSTPGATANQDAVPSKKXXXXXXXXXXXXXXXXXDDKEEIDLVSLGSGDSSXXXXXXXXXXXXXXXX----KKESKRYRFPNVSRGAVGGVSLEMATMLTRVPSSRSFLSSAAAAARGGAGAQPKRNPSTLINKGFNAVGGRHQV-RPSSSSSNA-VFCLGGKQSRLGETSRTRTL 239
            +A +L   RS+L +A   V R +KAL     K + QA DRE+   P PS                   + K AL+RK V     + A     S P AT         +                 D++ E DLVSLGS    XXXXXXXXXXXXX       KK ++R        GA+GG +L    +   +PS R+FL+SA    R G+G QP R P  LINKGFNAVGGRH V RPS+SSS    F LGGKQSRL  TSR RTL
Sbjct:  248 VALELQGVRSRLARARKEVSRLDKALAEATVKAERQARDRESASSPGPSAGTILGDWVAEERPCGNGGESKWALSRKSVNGRPGSKAP----SAPRATXXXXXXXXXRKRVERA-----------DEENEDDLVSLGSESXXXXXXXXXXXXXXXSGSHGDPKKTAERRAASRDGGGALGGAAL----IKPGLPS-RTFLTSAVV--RSGSGGQPNRKPGKLINKGFNAVGGRHLVVRPSASSSTKPAFYLGGKQSRLATTSRNRTL 492
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7Y3_ECTSI1.040e-1641.20RING-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..105
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1075contigP-lacustris_contig1075:42380..44807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1075.656.1mRNA_P-lacustris_contig1075.656.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1075 32591..46007 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1075.656.1 ID=prot_P-lacustris_contig1075.656.1|Name=mRNA_P-lacustris_contig1075.656.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=240bp
MAFDLHQARSKLVKAETLVKRWEKALTKTKMQAPDRETTHPPSPSDKDKL
ALARKLVKRNLANHAKDSNRSTPGATANQDAVPSKKKKEKEKEKKNSKRK
RTDDDKEEIDLVSLGSGDSSGDSGADEAKDGAHGGAKKESKRYRFPNVSR
GAVGGVSLEMATMLTRVPSSRSFLSSAAAAARGGAGAQPKRNPSTLINKG
FNAVGGRHQVRPSSSSSNAVFCLGGKQSRLGETSRTRTL*
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