mRNA_P-lacustris_contig1075.656.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1075.656.1
Unique NamemRNA_P-lacustris_contig1075.656.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: D7G7Y3_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y3_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.290e-48
Identity = 167/343 (48.69%), Postives = 196/343 (57.14%), Query Frame = 2
Query:  581 EKVANSYLSQFSSPTKGRPLGGLGQTDVERVLEQIRQGNAQADTVIRGQHEQLTRSIEREQKVKRELRKLKLECETMAFDLHQARSKLVKAETLVKRWEKALT----KTKMQAPDRETTHPPSPS------------------DKDKLALARKLVKRNLANHAKDSNRSTPGATANQDAVPSKKXXXXXXXXXXXXXXXXXDDKEEIDLVSLGSGDSSXXXXXXXXXXXXXXXX----KKESKRYRFPNVSRGAVGGVSLEMATMLTRVPSSRSFLSSAAAAARGGAGAQPKRNPSTLINKGFNAVGGRHQV-RPSSSSSNA-VFCLGGKQSRLGETSRTRTL 1525
            ++VA SYLSQFSSP +GR L GLGQTDVE+VL QIRQG  QADTVIR QHEQLT S+EREQ+ KRELRK K E ET+A +L   RS+L +A   V R +KAL     K + QA DRE+   P PS                   + K AL+RK V     + A     S P AT         +                 D++ E DLVSLGS    XXXXXXXXXXXXX       KK ++R        GA+GG +L    +   +PS R+FL+SA    R G+G QP R P  LINKGFNAVGGRH V RPS+SSS    F LGGKQSRL  TSR RTL
Sbjct:  172 DQVAYSYLSQFSSPARGRALVGLGQTDVEKVLGQIRQGYTQADTVIRSQHEQLTGSMEREQRAKRELRKWKQEGETVALELQGVRSRLARARKEVSRLDKALAEATVKAERQARDRESASSPGPSAGTILGDWVAEERPCGNGGESKWALSRKSVNGRPGSKAP----SAPRATXXXXXXXXXRKRVERA-----------DEENEDDLVSLGSESXXXXXXXXXXXXXXXSGSHGDPKKTAERRAASRDGGGALGGAAL----IKPGLPS-RTFLTSAVV--RSGSGGQPNRKPGKLINKGFNAVGGRHLVVRPSASSSTKPAFYLGGKQSRLATTSRNRTL 492          
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: A0A8B7PNC5_HYAAZ (E3 ubiquitin-protein ligase TRAIP-like n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7PNC5_HYAAZ)

HSP 1 Score: 60.1 bits (144), Expect = 1.500e-5
Identity = 27/72 (37.50%), Postives = 43/72 (59.72%), Query Frame = 1
Query:   91 CVICYDELTAGL--SAAPCGHVFHSVCINQWNGHGQCCPICKVPLPPKLLQLYYEPEQSSVDDTANGCTSRC 300
            CVIC D     +  SA PCGH+FH++C+ QW    + CP C+     KLL+LY++ E ++ ++  +  T +C
Sbjct:    5 CVICGDVFMPNIEVSATPCGHIFHTICVAQWFERSKTCPQCRFSGKMKLLRLYFD-ESNNDNNQVDAETLQC 75          
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: G4YPP3_PHYSP (RING-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YPP3_PHYSP)

HSP 1 Score: 59.3 bits (142), Expect = 2.210e-5
Identity = 36/102 (35.29%), Postives = 53/102 (51.96%), Query Frame = 1
Query:   79 SVQQCVICYDELTAGLSAAPCGHVFHSVCINQWNGHGQCCPICKVPL-PPKLLQLYYEPEQSSVDDTANGCTSRCGTRDTEDVAAEVTNLRRKLASSNKRVQ 381
            S Q+C IC +EL   L+AAPCGHV+H VCI Q       CPIC+       ++ LY++   S+ D  A+         D+ +++A V  L  ++   NK  Q
Sbjct:    6 SSQECHICLEELRRDLAAAPCGHVYHHVCILQALQVNSQCPICRRRTGDADVVSLYFDVPDSN-DSAASPQKPAQAAGDSAELSARVNTLMERIQWQNKHQQ 106          
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: Q23JF4_TETTS (Erythrocyte-binding protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23JF4_TETTS)

HSP 1 Score: 58.5 bits (140), Expect = 4.710e-5
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 1
Query:   46 QPLGVRRGVMPSVQQCVICYDELTAGLSAAPCGHVFHSVCINQWNGHGQCCPICK 210
            QP G++R V   V  C IC DEL   L+ APCGHVFH +CI Q   +   CP C+
Sbjct:    8 QPKGLQRKVY-EVPDCPICLDELVQDLACAPCGHVFHQLCIFQNFENSSTCPCCR 61          
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: A0A7I8K6I1_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K6I1_SPIIN)

HSP 1 Score: 57.8 bits (138), Expect = 6.840e-5
Identity = 34/128 (26.56%), Postives = 65/128 (50.78%), Query Frame = 1
Query:   37 SHPQPLGVRRGVMPSVQQCVICYDELTAGL----SAAPCGHVFHSVCINQWN-----GHGQCCPICKVP-LPPKLLQLYYEPEQSSVDDTANGCTSRC-GTRDTEDVAAEVTNLRRKLASSNKRVQAE 387
            + P P+G    +  ++  C ICY++L   +    S + CGHVFH +C+ QW      G    CP+CK   +P  + +L+++    S  +  + CT +     + E +++E+  L+ KL++    + A+
Sbjct:    7 ASPAPVGAHANIGRAI--CPICYEDLKPVVEDLQSISVCGHVFHELCLQQWQEYCPAGKKCTCPVCKQSYIPRDVTRLFFQSTGGSGHNCPSFCTQKTLSEAEAETLSSEIKKLQGKLSAVGSALDAQ 132          
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: M4BFU7_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFU7_HYAAE)

HSP 1 Score: 57.4 bits (137), Expect = 8.980e-5
Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 1
Query:   79 SVQQCVICYDELTAGLSAAPCGHVFHSVCINQWNGHGQCCPICKVPLPPK-LLQLYYEPEQSSVDDTANGCTSR--------CGTRDTEDVAAEVTNLRRKLASSNKR 375
            S Q+C IC +EL   L  APCGHVFH VCI Q       CPIC+       L+ LY++   S+V +T +   S           + DT+ +++ V +L  ++   NK+
Sbjct:    4 STQECHICLEELRRDLVTAPCGHVFHHVCILQALHVNPQCPICRRRTDDSNLITLYFD--VSNVHETVSSSRSEEMGTLAPVANSGDTKALSSRVNSLMERIQWQNKQ 109          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G7Y3_ECTSI1.290e-4848.69RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A8B7PNC5_HYAAZ1.500e-537.50E3 ubiquitin-protein ligase TRAIP-like n=1 Tax=Hya... [more]
G4YPP3_PHYSP2.210e-535.29RING-type domain-containing protein n=1 Tax=Phytop... [more]
Q23JF4_TETTS4.710e-549.09Erythrocyte-binding protein n=1 Tax=Tetrahymena th... [more]
A0A7I8K6I1_SPIIN6.840e-526.56Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
M4BFU7_HYAAE8.980e-534.26RING-type domain-containing protein n=1 Tax=Hyalop... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1075contigP-lacustris_contig1075:32591..46007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size2728
Cds size720
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1075.656.1prot_P-lacustris_contig1075.656.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1075 42380..44807 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815349.8187022-UTR-P-lacustris_contig1075:32590..327541622815349.8187022-UTR-P-lacustris_contig1075:32590..32754Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 32591..32754 +
1693493492.4445798-UTR-P-lacustris_contig1075:32590..327541693493492.4445798-UTR-P-lacustris_contig1075:32590..32754Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 32591..32754 +
1622815349.828596-UTR-P-lacustris_contig1075:33469..336771622815349.828596-UTR-P-lacustris_contig1075:33469..33677Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 33470..33677 +
1693493492.4554453-UTR-P-lacustris_contig1075:33469..336771693493492.4554453-UTR-P-lacustris_contig1075:33469..33677Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 33470..33677 +
1622815349.8390257-UTR-P-lacustris_contig1075:35066..351971622815349.8390257-UTR-P-lacustris_contig1075:35066..35197Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 35067..35197 +
1693493492.4655573-UTR-P-lacustris_contig1075:35066..351971693493492.4655573-UTR-P-lacustris_contig1075:35066..35197Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 35067..35197 +
1622815349.8544552-UTR-P-lacustris_contig1075:35748..359001622815349.8544552-UTR-P-lacustris_contig1075:35748..35900Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 35749..35900 +
1693493492.4736166-UTR-P-lacustris_contig1075:35748..359001693493492.4736166-UTR-P-lacustris_contig1075:35748..35900Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 35749..35900 +
1622815349.8673644-UTR-P-lacustris_contig1075:37142..372681622815349.8673644-UTR-P-lacustris_contig1075:37142..37268Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 37143..37268 +
1693493492.4824986-UTR-P-lacustris_contig1075:37142..372681693493492.4824986-UTR-P-lacustris_contig1075:37142..37268Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 37143..37268 +
1622815349.8800757-UTR-P-lacustris_contig1075:42352..423791622815349.8800757-UTR-P-lacustris_contig1075:42352..42379Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 42353..42379 +
1693493492.4914985-UTR-P-lacustris_contig1075:42352..423791693493492.4914985-UTR-P-lacustris_contig1075:42352..42379Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 42353..42379 +
1622815349.936251-UTR-P-lacustris_contig1075:44807..460071622815349.936251-UTR-P-lacustris_contig1075:44807..46007Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 44808..46007 +
1693493492.5300581-UTR-P-lacustris_contig1075:44807..460071693493492.5300581-UTR-P-lacustris_contig1075:44807..46007Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1075 44808..46007 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815349.8935413-CDS-P-lacustris_contig1075:42379..426291622815349.8935413-CDS-P-lacustris_contig1075:42379..42629Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1075 42380..42629 +
1693493492.5007226-CDS-P-lacustris_contig1075:42379..426291693493492.5007226-CDS-P-lacustris_contig1075:42379..42629Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1075 42380..42629 +
1622815349.9070506-CDS-P-lacustris_contig1075:42899..432331622815349.9070506-CDS-P-lacustris_contig1075:42899..43233Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1075 42900..43233 +
1693493492.5098393-CDS-P-lacustris_contig1075:42899..432331693493492.5098393-CDS-P-lacustris_contig1075:42899..43233Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1075 42900..43233 +
1622815349.9242837-CDS-P-lacustris_contig1075:44671..448071622815349.9242837-CDS-P-lacustris_contig1075:44671..44807Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1075 44672..44807 +
1693493492.5199473-CDS-P-lacustris_contig1075:44671..448071693493492.5199473-CDS-P-lacustris_contig1075:44671..44807Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1075 44672..44807 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1075.656.1

>prot_P-lacustris_contig1075.656.1 ID=prot_P-lacustris_contig1075.656.1|Name=mRNA_P-lacustris_contig1075.656.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=240bp
MAFDLHQARSKLVKAETLVKRWEKALTKTKMQAPDRETTHPPSPSDKDKL
ALARKLVKRNLANHAKDSNRSTPGATANQDAVPSKKKKEKEKEKKNSKRK
RTDDDKEEIDLVSLGSGDSSGDSGADEAKDGAHGGAKKESKRYRFPNVSR
GAVGGVSLEMATMLTRVPSSRSFLSSAAAAARGGAGAQPKRNPSTLINKG
FNAVGGRHQVRPSSSSSNAVFCLGGKQSRLGETSRTRTL*
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mRNA from alignment at P-lacustris_contig1075:32591..46007+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1075.656.1 ID=mRNA_P-lacustris_contig1075.656.1|Name=mRNA_P-lacustris_contig1075.656.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=13417bp|location=Sequence derived from alignment at P-lacustris_contig1075:32591..46007+ (Pleurocladia lacustris SAG_25_93)
AGGTCATGGTCTTGGTCGGTCGTTCCTGCCGTCTTCTCGCATCCCCAACC TCTGGGTGTACGACGGGGTGTGATGCCTTCTGTACAGCAGTGCGTAATCT GCTATGATGAGCTGACTGCTGGTCTCAGCGCCGCTCCGTGCGGCCACGTT TTCCACTCCGTCTGGTAAGGTCTCTTCGGGTCTCTCTTTTCTCATCGTTA TAGATATCCCATCGTGAAAACAGCACATCTGAGAGAGCAGATAAAGTTCA TGGCGTAGTAGGACACTCTTTCGATCCGCTTGCGTGTATAATGGCACATC ATGCCCTAACCTCCCGTTGTTTGTATCGCTGTTTCGAAATCTCGCAACAA ACGTAGTATCCGCTACAATTGCTATACCCTAAGGGGGTGGTAAACAACAT CATGGTAGCACATGCACATCTAGCGGCTTAGATTGGGAGTCTGGAGTCTA CACATCATGCTGCTTGTGGCACGCGCGCATCTACGTCACGCTGTCGTGTG ATTTTTTTCATGGAAGCCAGTCATGATGCGCCTAGCTTAGAGAATGTCTC CACGTAATTGTTCCGGCCGCCGGCCTTGAGGCTTTAACTTATACTCGAGT ACTCCGTTGTACAAAGAAGTCAATACTTGTAGGCGGCAGGCGTCATTACA ACCTTCACTGTTGTAAAGACTGTGAATTTCAACAGCCATCTGCGGGGGAC TTCCCAAATGATAGTCTTCTTTGAAGTTATGTACTCCGTATATTTTAAAA AATAACTTCCAGCAGCGGTATGTCTAGATTGAATACTCCTCAAGTTGTCG TTGATGGCCTCTCTTTATGTTGTTGTCCTGCCTGTTCGCGTTTGTCCGTG CCCGTATATCTGTTTTGCGTCGTTCCCAGCATCAACCAATGGAACGGACA CGGCCAGTGTTGCCCCATCTGTAAGGTCCCATTGCCGCCGAAGCTACTGC AGCTGTACTACGAGCCCGAACAAAGTTCTGTGGATGACACAGCCAACGGC TGCACGTCACGATGTGGGACGAGGGACACCGAGGATGTCGCTGCAGAAGT CACAAACCTCCGAAGAAAACTGGCCAGCAGCAACAAGGTACTACAGTACT GCTGTTGACGGGGCAAATAACCTTCGCGAGATCCCGGGGTCGCGTCTCCG TAGGCTGCGCATGATGTTCGAGTTTGGCTCGACGCTCGAACTACTGCACG CCCTATGTTTGAGCAACAGCAGTAGTAAATAAATTCCTCTCGAACGCTGT GCGCAGAGGGGGCTCAAGGGCTCGAGCTCTTGTACACGCCGCAAGTGGGT AGATGTAGCAGTCTGCATGACCTTCGGCAAAACGAAACCGTCGAGTACTT GGTTCCTCGCCTCTTTTGTACGCGACGTCTGTCAGTAGCACGGTTTGTAC CTCGGTGCTTCAAGTCAGCGTGTCCGCGGAACTGCATTAAGACGCAACCC TGGGCGCCGGTCGGTGGTTCGACGGGCGAAACCGCAGACCACAGAAAAGG GTGCCAATTACGACGGGATGTAGTGTACGGGGGTTCGAATCCGATCTTGG TGTCAGGAAGATCTTGGGCCATCGGCTTTCTCTTTTGTTTACGCTTGTAC TATTGTTCGGTTACCTCGCGCACTAGAAGGAGAAAGGAAGGAGAACGAAA GTGAGAGAGACCGCTGCCCACACATTTTGCTGACGCGCGCACACACACAC CCTCGGAAGGAACGAGAGTTTTCCCAAACCAGTGTATAGTCAGCGCTCTC CCAAGCCACACGTTCAGATTCATCAGAACATCCCCGCGGCTCCAGAAACA GCAAGCGCCTTCGCCAAGATATCTGCGCGTTGTTCCTCAGCTGGAATGCA TTCTACCGTAATCTCGTTGACTTCGTTCGGCCTTGGGCTTTCCCCGAAGA ACGAGGCGTCTCATCTGGTGGGGGAAAATGATCCTTTGTCTCAGTTAGCA GCGTTGGCGAGGGGCAGAGAGAGGCCTGCCTTCGAGATTGCTGGTGATGG CGGCGTTGTGGGATTCGAACCGCAACACCGTACCCCTTGGAGTATATTTT GTCATTTAGCACCCGTTTTACCTCTTCTGTGCTACATATATGCATGCGCT CCTTTTCAAGTCGGCCGATGCCGTTCTCAGTAGATGAACAGAGAGGTAGC TCGCGCGCGCGCACCCCTCGGGGTTGGCTGTCGCTGTCGGCTCCGGCACC GGGACAAGCGTGCTCTGACCACCCCAAGAAGGCACAGATAAGGGCTACTG CTCTGTTGCGGTAATTACCTGATGCATGCGTGCACATTCAGGGTATCCAA ACCTTGACCTTCTGCTGCGCGCTTGACTGCATTCATCCGGCTAGCGTATA TCGAGCATAAAGCTCTTGGGGGCGCGCTACGGATACAAGAGCCAAATCAT GACAAAGGCACGTGAATCCGTAAAACGTAGATCGCTGATTCCCGCCCATT TTATTCGTTGTTTTGGTTCTTTGCAGAGGGTTCAAGCTGAAGACAGCGCA CGCTAAGCAATGCGAGGAGGTACGAGTCTTGGAATATAAGCTCGCCCACG CGGTGCCTCGCCATCACGACGCTTAAGAAGGACGTGGAGACGACAAAGAT TGATTTGGTAAGGGGCGGTCGGCTCTGGCTCGCGACTCTTCTGGCAACCT CGACTTATGCTCTCTCTTCCCACTCTTTCTCGCGACCCGCTTGTATGGGT GCTTTGTGTACAGCGGGTGAGGCATGCCCGATCTATGGTCTCCTATCCGA GACACGCTAAGTTGACACAAGTTCACCACGCTTGTTCCTGTGTACAGCTG TAGTTCTGAGTGCAGATCGGGTTTTTTGACGGCTTGCAGAGAAGGCGTGA CTATTGTGTCACCAGGGAAAGTGTTGATGGCAGCCGTTGCCAAGACTGTT TAACCCGGACGAAATACTTGTTTTGGATGCTCCAAGATGGGGATGGGCAT CACGTGTCCTGTAAGGCGTCTAGCTTCGTCCACCATACCACGAAAAACTG CATCACCTGGCGGGGTGTGCAACGGCAATGCTGAAGTGATGCGGGGAGGA CCCAGCTCTAGGCTGATCGAATCGATCACGCCAGAGGTGCAGACATCCGG ATGATGCGCTGAACGCTTGACCGTTATTCGCCCACGTTTTGTCACCACCC ACACCCAGATCAAGAAGCAGGGGGGATCATAACAAGCTTATGCGAGAGAT GCAAGGGCACAGTAAGCGGCTACGCGAGTTGGAGGGAGAAGGTTGCTAAC AGCTACTTGAGCCAGTTTTCGTCTCCGACGAAGGGGCGGCCGCTCGGCGG GTTGGGCCAGGCAAGTTTCCTCGTATAGTCGCGCGTCAGAAATAGTGCCG TGGTACAGACGCCTACCTCGATAACGGAACCGCTCACTGCATCGAAAATT GCATCAGAGCCGCCACGCCACTCCCCCACAGTCGTTGTTTTCCTGGGTAA GAAATCTGCATTCCTACAAGCTGTTAGCGAACTTGGCTTTTGGCATCACG GTCGTCTTATCTAAGAAGGCTTGTCTAAGAAGGCGTGGTTTTGCTACCAT GGCAGCACGCTCGCGTCGCGGATGGATCCACATGTGTCGCGGTTGAAGGC CTCGATCACCAAGGTGGTGGTGTTTTTTTTTGTTTTTTTTTGTCTTTTTG CTCTGCTCATAGGGGAGAGGGAAGGCCCGGCCCTCGCGTTGCACCTGGCG AGAGAAAATGAAGAATCGTACCGAAAGAAAAATAATGGGTATCACACCCA TTTAGCGGCGGCGGCGCAAACAGCAACGCGAAAAAACCGTGTCAAAGACA TACCCGCATTTCTGCTCACGGAGCCCCTCGGTAAGGCTTTTCGGAGATGT CGCGGTCTGGGTCTGGAAGAATTGATGAAATGCGGCTGGCGTTCGGGGGG AGTGTAGGCCATGCACCGCAGACCGCGATGCCTTGAACTAAGCCTTTGGA TCAACACTACAGCCAGAGGTATCGCGAAAGAATGGCTACCCTCAAACCTT TAGCGTAGGGGAAAGGGAAGGGCCATGCCTTCGCGATATATATTTGGCGC GAACAGTGAAGAGGACATTTATTTTTACCACAGCAGTTCACATAAACCCG CACCTTGTCGTGTGTTACGGACGAACATTGGAGAAGTGTCAGCGCGCATC GCAGCCCACCCCGGCGCCTGTGCGTGCGCCGGGCTTCTGGCGGCCCCCAA CATCGCAGAAACTCTTTATCTTGTAGTTTCTCGAGAACCTTGAAATCGCG TGAGAGGGAGTCTCGCCCAGATGGTCCCGTGGACCGCGGGGTCTGAGCCA TTTTGTCAGTTTGGCATTTAGTTGCCCTTCTTTCGCTCCTTCCATTGACA GTTTCGAGTTTGATGGCCGCGAGGGCGCCAAGGGTTGTAGACGATGTTGC TGTTGCCAGGATTGCCTGGATAAACGCCAACGAAAAACACTACCAAAACC CAACATCTGTCTTGTCTGATAACCAGCATTGTACAATGCTGCCTCCTCTC GCTCTCGCTCTCTCTCACCATCCTCTATGCATCGCATGATTTTGTTTTTC AGACCGACGTGGAGAGAGTTCTCGAGCAGATCCGCCAAGGCAATGCACAG GCCGACACGGTGATCAGGGGCCAGCACGAGCAGCTCACCAGGTCGATCGA GAGAGAGCAGAAAGTCAAGCGGGAATTGGTGAGGATTGATTGCATTTTTG TTTTTCTAAACCGCCAAGTATACGTATGGATACTCTTACTTCGCTGTACG ACCTTTTTTTTTACGCCCGATTGATGAAAAACAAAGCGGTTTGAATGCGT CCTAGAAATACTCGCGGAGGCGTGTGCCAGCAAACAAACAAAAAATAAGA ACCGCGTCTGCGAGGCAAAACAATCCCAAGCGGTTGCCCTCTCTTCGTGT CTTGGTTCGGTCTTTGTCTTTGGACATGTAGACATTTAGACCAACGTAGT CGAGATTGTGAGACCAGACATATACCGAACCAAACGGCGATCGAGACGCA AATTAAACGGTGCAGGGCAGAGCATCTTCAACGGAAAACGGCTTGCAGCA CGCCCTAGACAATGGACCACTCAGTGGCAACAGACAATACTAATGTTGCG CTGCAAAATACTAGTACACCACAGCAGCGTCTATTGCAACATCTGTTGAT CGATGTGATTCGTCAAATCTGTCGCCGACAACAATGTCTATCGATAGTCA GCGCAATAGTTCATTGTGGCTTGCAATGCCTATCGATAGTTAGGGCAAAA CTCCATTGTGACGACAATGTCCATCGAGGCCGGCTTTTGCCACACACAAA AATAAAGATAATGCCCCGTGAGGGGGAACGACTCAGAACAGCCAGGCTTA ACGGAGCAATTTTTCTTGTAAGCTGTTGGCCGCGCTTATGAGTTAGTTGG TTCAGGACGAACCTTTTATGGATATCGTAATATCTCGGACATCTAACTAG CAATCAAGAGGGAGCGGAGCGTGTCAATAGGTTCGTCGTTGCATAGCCGA GCCTCGCGAACCATGGACCCGTCCGCCGCTTCTTCTCGCTCATGCGCGAG GAGTTCGACTTGGGCGGCAAGAACAGGACACATTGTTGGCATGTACTGTA ACGTTGATCGCATCACCTCTTGTGAGTTCGTGTTAACGCTTGTACTGTTT GGGCGCAAGACATTTCGTGTCTATATCTGGCTCTTGTTTGGGTACTTGGC GTTGGTGCTCCGTGTATGGGTGAACTCTGCCTTCCACTCTTGACGATAGA AAGGGAATAGAACACTGCCGCAACAGCTGTCATCAAAGAGTGGTTGACAG CAGACATCGCCGGCCAGAATAGATGTCAAATGCTGTCTGTCGATAGATAT ATTGTTGTCGACAATAGATTTCAAACGCTGTCCTTCGATAGACATTGTTG TAAACGATAAATTTCGAACGCTATCTGCCGATAAACAATGCTGTCGACAA TTACGTTTGAGCAAGCCGTTTATTGATGGGCATTCTGTAGTAAACAATAT ATCCCGAACGCGCTCTTCTGATAGATTTTATTCGCAACAATAATGAATGG GGGGGGCCAATGGTCACAATTCTTCGCAGCACTCGTAGAGTAGCAGCGTC GTGCAGCCATCAACGACTATTGTTCGAAACAACGCACTTCCGAACAGCAT CGCCATAGACATTGGTTCTGGTATTCACCATAGACCAATAGAGTAGAGTT AAACGCCCGCCGGGTAGCCATATAGTCGACGATGAATGGATACACATTAT GGTCTATTCCACCCCTCTACCACAACTATTCCCACGAAAATTTTATTGCG ATAGGGTCTCGCTGCAGATTCGCGTTCAAGGCCGCCTCGCGCGCCCCGCC CTCGTGACGTCATGAGTTTTTCCGATGGCCACGGAAGATTACATGGCTCT CTTGCATGTGCTGCAATGCATTTGTTGGGTGCCGTCCCTCATCGTGTCTG TTTTTTGTGTTTTACCAGCACTACTGAACAGACAGTGAAGTCGAGTACGG CAGAAGCTTATTTGGGGCTGTTAAGGGAATCAGCAGGCATATTTATGGAT GGGAATAGAAGTGCTTCAGGTGAAAAGATACGGCAGGCATACGACCGTTG AAATCAGGTCAGATAGGAGAGAAGACGTATATGTTGGAGAAAATATTCGG CCAGAAGAGGCCCAAAACAACCCGCCTGCGTGCAGGACATTTGATTTTGT CCCCATCAACGACTGTTGAATGGGGAAGAGCAGTCCGTGACCATTGTGTT TTTCTGGTGTGGACCCAAAGTGTCATGAAATTGTTTACGGAGAAGTTTAC AACTATCCTCGCCATTTTGGATAGGAGCTGTTCACAATGTGTTGCTAGAG ATAGATCGAGCTGAAACCGCGCTTTCTTTCCTGGCATGGCATCCTGCGCC ATGCAGGTGTCTCCGTAAATGGAATACAGCCACAGGAGCAGGAGGGAACA CAGCAACACAGCTGCAGCAACACACACACACACACACACACACACACAGG TGCCCAGATAGTGTGCGTCTCTTGCAAAGGTTTTGTAGAGAGGTCTACTT TCCTATTGTTTTGGGCTTCTCCCAGGATTCTTCGTCGAATTTTTGTCCCC TTTCGGGGACTTTGATTTTAGGGAAATCGACAAAAAAGGGTATACCCTGT GGATTCTTGAACAAAATCGGGTACCATTTTTTCGGAGCGGGGCGCGCTAC CGTCCGCCCCTGAACGCCTCTAAATCGCGTTCCGAAGTCTCTATACACCG GGCATGGTGTGTGGGCAGCACCCCAAGCCGTTTTTTCGTCTTCGACACCC CAGAACAGCACAAATACTGGCGCCCAAAACTTCCTCTCCGCAGAAACCCG ATTTTGTTCATAAACCACCAGGGTATACCCATGCCTGTGCTAAAAGTTCA TAAACTACCCTATTTGTTCATAGCATACCCCCTTTTGTTCAACAGCACTA CCCGTTTTTGTTCAACAGCCTCCTCCCGCGGAGAAATGGACCGTCCATCT TTCCGCAACCAGCAAGCAAGATCCTGCAACCAACAACCGAAAAATCGGCA AGTTGCCCGAGGCGGTGACGACGTCGATGATGCGACTGCACTGCTACTGC TGCTGTAGGAACGCACAACAAAAGATCCGCCGTGTCAGAGAACCAAAAAA CGACGGACGGCGGGACACTCCCGAGCCGCACACACACCCTCTCGCCGTGC TTTCTCTTGCCCACACCTAATCCCTTCTCACCTACATTAGATAAACAGCT CAAGTTAAAGTACACAACACGTGCGGTCATCATCGGTGCTCCCTGCCGAA AACAATCTGACAATCTGACGCCCTGACTGACAGAAATGAATGGTGTATAA TATGGGGTACGGTTATAGATAGATACCCCAGCATATACTACTCAACACGC CATACCCAACCCGCCCCCGGCCAACACCACCAAACGAGAAGATTATGGGG GCAAAATATCGGTGAAATGGAGTGATGTTAACCTCGTATTGACTGGTATG AGTTTGATTGACATCGGTAGCACCCACATGGACGGGAGGCGTGTGTGCGG CTCGGGAGTGTCCCGCCGTCCGTCGTTTTTGGTTCTCTGACACGGCGGAT CTTTTGTTGTGCGTTCCTACAGCAGCAGTAGCAGTGCAGTCGCATCATCG ACGTCGTCACCGCCTCGGGCAACTTGCCGATTTTTCGGTTGTTGGTTGCA GGATCTTCTTGCTGGTTTGCGGAAAGATGGACGGTCCATTTCTCCGCGGG AGGAGGCTGTTGAACAAAAACGGGTAGTGCTGTTGAACAAAAGGGGGTAT GCTATGAACAAATAGGGTAGTTTATGAACTTTTAGCACAGGCATGGGTAT ACCCTGGTGGTTTATGAACAACATCAGGTGCTCTGCGGAGAGGAAGTTTT GGGCGCCAGTATTTGTGCTGTTCTGGGGTGTCGAAGACGAAAAAACGGCT TGGGGTGCTGCCCACACACCATGCCCGGTGTATAGAGACTTCGGAACGCG ATTTAGAGGCGTTCAGGGGGCGGACGGTAGCGCGCCCCGCTCCGAAAAAA TGGTACCCGATTTTGTTCAAGAATCCACAGGGTATACCCTTTTTTGTCGA TTTCCCTTGATTTTACCCGCTGACACTGACGTATTTTCATTGGTCAGCCG GTTAGCGACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGA GCGCACGCAGGGGAGCCAGGAGGCGGGATGGCAGTGGCGAGAAGGCAAAC AAACACACATCACACGCAATGAGACACGCATAGGCAGTCAGAGATAGAGA GGTTGAGAGACGGAGAGCGGAGAAAGAGGAGTGGAGAGGAAAAAGAGAGA TAACACACGTCCCCTCCCTCTTCCTGCTTTTTGTTTTGTTCGTGTGGCAA TGATGATCACACACACTCGAGAACAACCGCTTTGGTTTTCTTTTCAGGCT TTAGACAGAAAGAGAGACGTAGGCGGACAGAGGGAGAGAGAGGCTCTCAG TCTCCTACCCTACTGCTGTACGAACATCTGCGTCTTTTGTTCGGCAGACC CTTGGCGTATGTACAGCTACAGCTAGAGGCTACATATCTCATTTCTATAC GCCCCTCTCTAGTTGGCCTGCTCTTTCTCGAGTGGTTTTCTTGTATTTTG AGCGCTGCATACGGTATTACGCACCACCCTGTTTTTCTGTGCTTGGCCCC CGCTTGAAGACGCAGCAGCCTCCTGCAGGCACTCGTTTTTCAAGCAAAAA GTAAGGTGATTCCCCAGAGTCTATTACGCTGAATAGTCCGCTGTGCCTAA GCACGTGACGTCACGCAATAAAGAACACCACACCGTGCCTTCTCTGGTTC CTCATTGGGGTTGAGAAAGTGTGGACGATTTGGAGTACAGATATCGCGTA GTTCGATTTCATTATGACAGGCGTACAAACGCACAACATATGTCGATGGC TTCCTCAGCAGCATTTTTTTACCCTGTGCTCACGCGCAGGATGTCCTGAT TCTGGCAATGGTTGAAACGCAAATTTCCTCCGTTGTTTGGGCGCTCTCGC CCCCCCCCCCACTCTGGGCGTGGTCCGAACATATTTGTTTTCACAGCAGT CTGCGCTTCCCTCCATTCGCTTCTGGACCTATCCGTTGTGTCACGCACTC GAGAAGATTCTTCGTTCCTTGTTTGAAAAATCGCCGACATAACATAGCCT ATGACCCTTGTGCTGCCTGCGTACCCCGCTTCGACCCTTGTTTCGAATTC CGGCGACGGCAGCGCAAATTGAAGCTAGAGTGCGAGACGATGGCGTTTGA CCTGCACCAAGCGCGGTCCAAACTCGTCAAGGCCGAAACCTTGGTCAAAC GCTGGGAGAAAGCCCTCACCAAGACCAAGATGCAGGCGCCAGATAGGGAA ACAACACATCCCCCCAGCCCCTCGGACAAAGATAAGTTGGCTCTCGCCCG CAAGTTGGTCAAGCGGAATCTGGCCAACCACGCCAAGGATAGCAACCGGT CTACACCGGGGGCTACGGCTAACCAGGATGCGGTGCCAAGTAAGTCTCTC ATGTGTTGGTTCTCAGGGTGATTTTTGGGAGGGAGGTGTCCGCTCTGAAT AATATTCTCGTTTCAACTTGGCGCGGTTGTCAGTAGATTTTGGACCGATT TCTTACTCGCGCGTACGTAATGGCCTCAATGTCCAATATTTCCGCTATAC TTGTAGCAGTACCCTCGGTGCATGCGCACGCCCTGGATGGCTTGCTCACC TGCTACATTCTTGGCCTTGTCGCCGAAAATTCTCCACCGGGTCATTTTTG TCATTTTAGGTAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAGAATTCC AAGAGAAAGAGGACCGACGATGATAAGGAGGAGATCGACCTGGTGTCACT CGGATCAGGCGACAGCAGCGGCGACAGCGGCGCCGACGAGGCAAAAGACG GCGCCCACGGCGGTGCCAAGAAAGAATCCAAGAGGTATAGATTTCCAAAT GTCTCTCGTGGCGCCGTCGGTGGCGTTTCGTTGGAAATGGCCACGATGCT GACCCGTGTGCCATCCTCGCGAAGTTTCCTCTCGTCGGCGGCGGCAGCGG CAAGAGGGGGAGCAGGAGCGCAGCCCAAGCGCAATCCTTCAACGTGAGCT AAATTTACCTGTGCATTATGTCGAGGTTTTGCTACGAGTTGTACCTGTTT TTCTGCCCTTTCCTCGCGTGAGCGCATCGTCTCTCAAAGCAGTGTAGTTC CTGTACGCCAACACCCTCCGTAGGCAAGCTGTTGATTCTCGTTGTAGGCG GGGAAGATCATGCTGCAAGTGGAATGCTTCGCATCTACTCTACCCCCCCC TCTCTTCCGCCATATCCTACGAGTCCCCGCCTGAGTCGAAATCAGAGGTA GGCGGGGATACTAATATTAGCAAGAAATGAACACACGGAGCTAAAGGCCT CGTTGGCGTCTTCCGAGAAATGCACACGCCACATACACTTCACGATAGAG GAACGACGCGCGGAACGACGTGCGGTTCTGTTCTCTTGCTCATATCTTGA ATTTTGATTCCGTCTCACCGATTTCGAAGAACCTCCCTGGCTGAACGCAG TTACGATGGATCCTGCTCTTCCTTCACCCACAAGAACAACAACCAACATA TCAACAGCGGTAAACGCTGACAATTGTGCAGGGTATACCGCGTTGTATTT CTGTTTCGCCACCGTTTCTGTGTTCCCCTCGTGATGTGATGTGGATGTTC TTTTCGCGAAGCAAGATCTCCCATGGTTATTTCAATGGTAGCGCGGGCAT CTTAAGAAACTCTTCTAGTATCATATTTGCAGGTCGTCCCGATGGTCTAG TCGGTAACACCTAACCTCGCTTTGTACCTAGCAGTGGAACACTAGTTCGT GTCTACATTGAGGGAAGAGATCCGGGGAACTCTCCTCGCGTAAAAAATTG AAGGAATGTCCCTACCGCAGGAGGGCGGTTGGGGGGCCTGAGGGCGAGGA ACCTGCTGTGTGACCCCGGCTAGCAGCGCCAAAAGAAATGAAAAAAAAAA TGGAGCAGGGAAATTCAATGTTTTGGAGGCCATTTCGGGGATTGTCGCGG GGAGGGGGGTAAATCGTGCGTCCAGAATCGCGCAGTGTTCCACGCATTGG AGCGGTGGTAGATTGTTGGCGTCTGTTGAACGTTTAGTAAGCATAGCATG GATATCGAAGCACGAGGCAAACATCACGCTAGAGCGTCAAATGATGGCTC AAGTAACTGTTCCTAAGATAGTCAGGGAGACGGTACTTTTAGGATGTGCC TTGTTGCATTTGTTCGGACCCTTCACCCCTCTCGACGCGGTTCGTGATTG CAAGCGGCTTGTCGTGGAGCATTACTTCGCTTTCTGCTGTGGCATTTCAT TGCAACACATCTGTCTCTTCTTTTGTACGGTTGTCTGTTATCTATTTGTC AGTACCAGAGCGAACCCCTCACGACCAACTTCACTACCCACCAAAACAGC GTGCGTACACTGACAAGCACAGACAAGCACAGCATCGCCCCTCCCGCCCC TACTCTCTGCATCAACCTTTTACATGTACAGGCTCATAAACAAGGGCTTC AACGCGGTGGGCGGAAGGCATCAAGTACGGCCTTCCTCTTCCTCTTCGAA CGCCGTGTTTTGCCTCGGCGGCAAGCAGAGCCGGCTAGGTGAAACCTCGC GCACCCGCACTCTGTAGCGCTTCTAAGAAACCGATCCTCTTGATTTTTCT GTTTACAACAACGTGCGGATGTCTCGTGAAGAGCTGTGAGGAAGGCGTTT CGGCCCCATGCCTGGGAAACGTCACAGTACCTGCTGTCTCAGAGTTTTTT TTGCGGAGATTTTTTGCAATATTTGTAGTCTCCGTTGTTTTCAGGAGGCG AAGCGGCGACGTGGCAGCAGGTGCTTGGGCCAGGAAAAGAAGCCTTCCAG TTCCTTCTCCGGAGACATCTATGCCTATCTTTCTGAGCAAGGTTCAGAGT TGGCGACCGTCTGGAGTTGTTTTTGGGCCTCCGGCAGTTTGGCGTAAACA GCTGGTGGTCCTCGTTCGAGGATACTACACGTACCTTTCAAGGGTTTTTA GTATTTCCTCGGTACTTTTCCCCTGTTTTTTTTGTTGTCTTTTCGGGTTG GAACGGAAGCACTTGCATCGCACAGAAAGGTCAGTGATGCCGGCAGGAGT ACTAAAACGTTGATTGCAGTAATCAATTCGCGTGCCAACGGGGCAGGTGC GATTGACAAAACTGGCAACCAACCATAACGAAAAAAAGAGCTCTCGGTGT AGGGACAGGCCAATCCAACAGTCGTGCACATATCATCCTGTGCTGTACCC TGGACCCTTCCTCGGGGAAGCGTCCGTACCTTCACCTTAATATCGCCAGT GTTGGGAGGATGATAGATTGTGCTTGCTCTTTTCTAGTCTTGGCCTGGAG AACTGGAAATGGCGGGTTGTCCACCTCACGTGGCGTGGGGGGAGAGCGGC CGGCAACCTTCTACAAGTGTACCGGTACCCGTTGTTGTCGTCGTGGTCAG AATCAGAATCTGTTGGACAGCGGGGCGTAAAGCCCAGTCTGGAATGTGTC GGGATAAGCTGTTCGTTTGGGTAGTAGGTAGTAATGAGTGTGTATAGAGC CCATCTTGGTGCTGCTGTGCTTGGAGTTGTGTTTCTGTCGTAAAAGGTCC CGCTTTCTTCACTTGACCTGTGACCCCAACAACCTTTCCTCAATCATTTA TGCGGTGTCTTTTGGCCTACTATTATTGCCTACAAAGGAAGAGCGTGGGG CCATCGACTCTGTGTGCTTTATGCAACGTTTATCTAGGAATGGAATACTA CCACCTGAGGTGGGAACGTCATTTGCCTAGCCCCAAACTTCTTACGGATA CTTCATGCTGTGTACGA
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Coding sequence (CDS) from alignment at P-lacustris_contig1075:32591..46007+

>mRNA_P-lacustris_contig1075.656.1 ID=mRNA_P-lacustris_contig1075.656.1|Name=mRNA_P-lacustris_contig1075.656.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1440bp|location=Sequence derived from alignment at P-lacustris_contig1075:32591..46007+ (Pleurocladia lacustris SAG_25_93)
ATGGCGTTTGACCTGCACCAAGCGCGGTCCAAACTCGTCAAGGCCGAAAC
CTTGGTCAAACGCTGGGAGAAAGCCCTCACCAAGACCAAGATGCAGGCGC
CAGATAGGGAAACAACACATCCCCCCAGCCCCTCGGACAAAGATAAGTTG
GCTCTCGCCCGCAAGTTGGTCAAGCGGAATCTGGCCAACCACGCCAAGGA
TAGCAACCGGTCTACACCGGGGGCTACGGCTAACCAGGATGCGGTGCCAA
ATGGCGTTTGACCTGCACCAAGCGCGGTCCAAACTCGTCAAGGCCGAAAC
CTTGGTCAAACGCTGGGAGAAAGCCCTCACCAAGACCAAGATGCAGGCGC
CAGATAGGGAAACAACACATCCCCCCAGCCCCTCGGACAAAGATAAGTTG
GCTCTCGCCCGCAAGTTGGTCAAGCGGAATCTGGCCAACCACGCCAAGGA
TAGCAACCGGTCTACACCGGGGGCTACGGCTAACCAGGATGCGGTGCCAA
GTAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAGAATTCCAAGAGAAAG
AGGACCGACGATGATAAGGAGGAGATCGACCTGGTGTCACTCGGATCAGG
CGACAGCAGCGGCGACAGCGGCGCCGACGAGGCAAAAGACGGCGCCCACG
GCGGTGCCAAGAAAGAATCCAAGAGGTATAGATTTCCAAATGTCTCTCGT
GGCGCCGTCGGTGGCGTTTCGTTGGAAATGGCCACGATGCTGACCCGTGT
GCCATCCTCGCGAAGTTTCCTCTCGTCGGCGGCGGCAGCGGCAAGAGGGG
GAGCAGGAGCGCAGCCCAAGCGCAATCCTTCAACGTAAAAAAAAAAAAGA
AAAAGAAAAAGAAAAGAAGAATTCCAAGAGAAAGAGGACCGACGATGATA
AGGAGGAGATCGACCTGGTGTCACTCGGATCAGGCGACAGCAGCGGCGAC
AGCGGCGCCGACGAGGCAAAAGACGGCGCCCACGGCGGTGCCAAGAAAGA
ATCCAAGAGGTATAGATTTCCAAATGTCTCTCGTGGCGCCGTCGGTGGCG
TTTCGTTGGAAATGGCCACGATGCTGACCCGTGTGCCATCCTCGCGAAGT
TTCCTCTCGTCGGCGGCGGCAGCGGCAAGAGGGGGAGCAGGAGCGCAGCC
CAAGCGCAATCCTTCAACGCTCATAAACAAGGGCTTCAACGCGGTGGGCG
GAAGGCATCAAGTACGGCCTTCCTCTTCCTCTTCGAACGCCGTGTTTTGC
CTCGGCGGCAAGCAGAGCCGGCTAGGTGAAACCTCGCGCACCCGCACTCT
GTAGGCTCATAAACAAGGGCTTCAACGCGGTGGGCGGAAGGCATCAAGTA
CGGCCTTCCTCTTCCTCTTCGAACGCCGTGTTTTGCCTCGGCGGCAAGCA
GAGCCGGCTAGGTGAAACCTCGCGCACCCGCACTCTGTAG
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