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Homology
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: D7G7Y3_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y3_ECTSI) HSP 1 Score: 190 bits (483), Expect = 1.290e-48 Identity = 167/343 (48.69%), Postives = 196/343 (57.14%), Query Frame = 2
Query: 581 EKVANSYLSQFSSPTKGRPLGGLGQTDVERVLEQIRQGNAQADTVIRGQHEQLTRSIEREQKVKRELRKLKLECETMAFDLHQARSKLVKAETLVKRWEKALT----KTKMQAPDRETTHPPSPS------------------DKDKLALARKLVKRNLANHAKDSNRSTPGATANQDAVPSKKXXXXXXXXXXXXXXXXXDDKEEIDLVSLGSGDSSXXXXXXXXXXXXXXXX----KKESKRYRFPNVSRGAVGGVSLEMATMLTRVPSSRSFLSSAAAAARGGAGAQPKRNPSTLINKGFNAVGGRHQV-RPSSSSSNA-VFCLGGKQSRLGETSRTRTL 1525
++VA SYLSQFSSP +GR L GLGQTDVE+VL QIRQG QADTVIR QHEQLT S+EREQ+ KRELRK K E ET+A +L RS+L +A V R +KAL K + QA DRE+ P PS + K AL+RK V + A S P AT + D++ E DLVSLGS XXXXXXXXXXXXX KK ++R GA+GG +L + +PS R+FL+SA R G+G QP R P LINKGFNAVGGRH V RPS+SSS F LGGKQSRL TSR RTL
Sbjct: 172 DQVAYSYLSQFSSPARGRALVGLGQTDVEKVLGQIRQGYTQADTVIRSQHEQLTGSMEREQRAKRELRKWKQEGETVALELQGVRSRLARARKEVSRLDKALAEATVKAERQARDRESASSPGPSAGTILGDWVAEERPCGNGGESKWALSRKSVNGRPGSKAP----SAPRATXXXXXXXXXRKRVERA-----------DEENEDDLVSLGSESXXXXXXXXXXXXXXXSGSHGDPKKTAERRAASRDGGGALGGAAL----IKPGLPS-RTFLTSAVV--RSGSGGQPNRKPGKLINKGFNAVGGRHLVVRPSASSSTKPAFYLGGKQSRLATTSRNRTL 492
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: A0A8B7PNC5_HYAAZ (E3 ubiquitin-protein ligase TRAIP-like n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7PNC5_HYAAZ) HSP 1 Score: 60.1 bits (144), Expect = 1.500e-5 Identity = 27/72 (37.50%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 91 CVICYDELTAGL--SAAPCGHVFHSVCINQWNGHGQCCPICKVPLPPKLLQLYYEPEQSSVDDTANGCTSRC 300
CVIC D + SA PCGH+FH++C+ QW + CP C+ KLL+LY++ E ++ ++ + T +C
Sbjct: 5 CVICGDVFMPNIEVSATPCGHIFHTICVAQWFERSKTCPQCRFSGKMKLLRLYFD-ESNNDNNQVDAETLQC 75
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: G4YPP3_PHYSP (RING-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YPP3_PHYSP) HSP 1 Score: 59.3 bits (142), Expect = 2.210e-5 Identity = 36/102 (35.29%), Postives = 53/102 (51.96%), Query Frame = 1
Query: 79 SVQQCVICYDELTAGLSAAPCGHVFHSVCINQWNGHGQCCPICKVPL-PPKLLQLYYEPEQSSVDDTANGCTSRCGTRDTEDVAAEVTNLRRKLASSNKRVQ 381
S Q+C IC +EL L+AAPCGHV+H VCI Q CPIC+ ++ LY++ S+ D A+ D+ +++A V L ++ NK Q
Sbjct: 6 SSQECHICLEELRRDLAAAPCGHVYHHVCILQALQVNSQCPICRRRTGDADVVSLYFDVPDSN-DSAASPQKPAQAAGDSAELSARVNTLMERIQWQNKHQQ 106
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: Q23JF4_TETTS (Erythrocyte-binding protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q23JF4_TETTS) HSP 1 Score: 58.5 bits (140), Expect = 4.710e-5 Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 1
Query: 46 QPLGVRRGVMPSVQQCVICYDELTAGLSAAPCGHVFHSVCINQWNGHGQCCPICK 210
QP G++R V V C IC DEL L+ APCGHVFH +CI Q + CP C+
Sbjct: 8 QPKGLQRKVY-EVPDCPICLDELVQDLACAPCGHVFHQLCIFQNFENSSTCPCCR 61
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: A0A7I8K6I1_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K6I1_SPIIN) HSP 1 Score: 57.8 bits (138), Expect = 6.840e-5 Identity = 34/128 (26.56%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 37 SHPQPLGVRRGVMPSVQQCVICYDELTAGL----SAAPCGHVFHSVCINQWN-----GHGQCCPICKVP-LPPKLLQLYYEPEQSSVDDTANGCTSRC-GTRDTEDVAAEVTNLRRKLASSNKRVQAE 387
+ P P+G + ++ C ICY++L + S + CGHVFH +C+ QW G CP+CK +P + +L+++ S + + CT + + E +++E+ L+ KL++ + A+
Sbjct: 7 ASPAPVGAHANIGRAI--CPICYEDLKPVVEDLQSISVCGHVFHELCLQQWQEYCPAGKKCTCPVCKQSYIPRDVTRLFFQSTGGSGHNCPSFCTQKTLSEAEAETLSSEIKKLQGKLSAVGSALDAQ 132
BLAST of mRNA_P-lacustris_contig1075.656.1 vs. uniprot
Match: M4BFU7_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFU7_HYAAE) HSP 1 Score: 57.4 bits (137), Expect = 8.980e-5 Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 1
Query: 79 SVQQCVICYDELTAGLSAAPCGHVFHSVCINQWNGHGQCCPICKVPLPPK-LLQLYYEPEQSSVDDTANGCTSR--------CGTRDTEDVAAEVTNLRRKLASSNKR 375
S Q+C IC +EL L APCGHVFH VCI Q CPIC+ L+ LY++ S+V +T + S + DT+ +++ V +L ++ NK+
Sbjct: 4 STQECHICLEELRRDLVTAPCGHVFHHVCILQALHVNPQCPICRRRTDDSNLITLYFD--VSNVHETVSSSRSEEMGTLAPVANSGDTKALSSRVNSLMERIQWQNKQ 109
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Model size | 2728 |
| Cds size | 720 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815349.8187022-UTR-P-lacustris_contig1075:32590..32754 | 1622815349.8187022-UTR-P-lacustris_contig1075:32590..32754 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 32591..32754 + |
| 1693493492.4445798-UTR-P-lacustris_contig1075:32590..32754 | 1693493492.4445798-UTR-P-lacustris_contig1075:32590..32754 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 32591..32754 + |
| 1622815349.828596-UTR-P-lacustris_contig1075:33469..33677 | 1622815349.828596-UTR-P-lacustris_contig1075:33469..33677 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 33470..33677 + |
| 1693493492.4554453-UTR-P-lacustris_contig1075:33469..33677 | 1693493492.4554453-UTR-P-lacustris_contig1075:33469..33677 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 33470..33677 + |
| 1622815349.8390257-UTR-P-lacustris_contig1075:35066..35197 | 1622815349.8390257-UTR-P-lacustris_contig1075:35066..35197 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 35067..35197 + |
| 1693493492.4655573-UTR-P-lacustris_contig1075:35066..35197 | 1693493492.4655573-UTR-P-lacustris_contig1075:35066..35197 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 35067..35197 + |
| 1622815349.8544552-UTR-P-lacustris_contig1075:35748..35900 | 1622815349.8544552-UTR-P-lacustris_contig1075:35748..35900 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 35749..35900 + |
| 1693493492.4736166-UTR-P-lacustris_contig1075:35748..35900 | 1693493492.4736166-UTR-P-lacustris_contig1075:35748..35900 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 35749..35900 + |
| 1622815349.8673644-UTR-P-lacustris_contig1075:37142..37268 | 1622815349.8673644-UTR-P-lacustris_contig1075:37142..37268 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 37143..37268 + |
| 1693493492.4824986-UTR-P-lacustris_contig1075:37142..37268 | 1693493492.4824986-UTR-P-lacustris_contig1075:37142..37268 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 37143..37268 + |
| 1622815349.8800757-UTR-P-lacustris_contig1075:42352..42379 | 1622815349.8800757-UTR-P-lacustris_contig1075:42352..42379 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 42353..42379 + |
| 1693493492.4914985-UTR-P-lacustris_contig1075:42352..42379 | 1693493492.4914985-UTR-P-lacustris_contig1075:42352..42379 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 42353..42379 + |
| 1622815349.936251-UTR-P-lacustris_contig1075:44807..46007 | 1622815349.936251-UTR-P-lacustris_contig1075:44807..46007 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 44808..46007 + |
| 1693493492.5300581-UTR-P-lacustris_contig1075:44807..46007 | 1693493492.5300581-UTR-P-lacustris_contig1075:44807..46007 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig1075 44808..46007 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815349.8935413-CDS-P-lacustris_contig1075:42379..42629 | 1622815349.8935413-CDS-P-lacustris_contig1075:42379..42629 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1075 42380..42629 + |
| 1693493492.5007226-CDS-P-lacustris_contig1075:42379..42629 | 1693493492.5007226-CDS-P-lacustris_contig1075:42379..42629 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1075 42380..42629 + |
| 1622815349.9070506-CDS-P-lacustris_contig1075:42899..43233 | 1622815349.9070506-CDS-P-lacustris_contig1075:42899..43233 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1075 42900..43233 + |
| 1693493492.5098393-CDS-P-lacustris_contig1075:42899..43233 | 1693493492.5098393-CDS-P-lacustris_contig1075:42899..43233 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1075 42900..43233 + |
| 1622815349.9242837-CDS-P-lacustris_contig1075:44671..44807 | 1622815349.9242837-CDS-P-lacustris_contig1075:44671..44807 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1075 44672..44807 + |
| 1693493492.5199473-CDS-P-lacustris_contig1075:44671..44807 | 1693493492.5199473-CDS-P-lacustris_contig1075:44671..44807 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1075 44672..44807 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1075.656.1 >prot_P-lacustris_contig1075.656.1 ID=prot_P-lacustris_contig1075.656.1|Name=mRNA_P-lacustris_contig1075.656.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=240bp
MAFDLHQARSKLVKAETLVKRWEKALTKTKMQAPDRETTHPPSPSDKDKL ALARKLVKRNLANHAKDSNRSTPGATANQDAVPSKKKKEKEKEKKNSKRK RTDDDKEEIDLVSLGSGDSSGDSGADEAKDGAHGGAKKESKRYRFPNVSR GAVGGVSLEMATMLTRVPSSRSFLSSAAAAARGGAGAQPKRNPSTLINKG FNAVGGRHQVRPSSSSSNAVFCLGGKQSRLGETSRTRTL* back to topmRNA from alignment at P-lacustris_contig1075:32591..46007+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig1075.656.1 ID=mRNA_P-lacustris_contig1075.656.1|Name=mRNA_P-lacustris_contig1075.656.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=13417bp|location=Sequence derived from alignment at P-lacustris_contig1075:32591..46007+ (Pleurocladia lacustris SAG_25_93) AGGTCATGGTCTTGGTCGGTCGTTCCTGCCGTCTTCTCGCATCCCCAACC
TCTGGGTGTACGACGGGGTGTGATGCCTTCTGTACAGCAGTGCGTAATCT
GCTATGATGAGCTGACTGCTGGTCTCAGCGCCGCTCCGTGCGGCCACGTT
TTCCACTCCGTCTGGTAAGGTCTCTTCGGGTCTCTCTTTTCTCATCGTTA
TAGATATCCCATCGTGAAAACAGCACATCTGAGAGAGCAGATAAAGTTCA
TGGCGTAGTAGGACACTCTTTCGATCCGCTTGCGTGTATAATGGCACATC
ATGCCCTAACCTCCCGTTGTTTGTATCGCTGTTTCGAAATCTCGCAACAA
ACGTAGTATCCGCTACAATTGCTATACCCTAAGGGGGTGGTAAACAACAT
CATGGTAGCACATGCACATCTAGCGGCTTAGATTGGGAGTCTGGAGTCTA
CACATCATGCTGCTTGTGGCACGCGCGCATCTACGTCACGCTGTCGTGTG
ATTTTTTTCATGGAAGCCAGTCATGATGCGCCTAGCTTAGAGAATGTCTC
CACGTAATTGTTCCGGCCGCCGGCCTTGAGGCTTTAACTTATACTCGAGT
ACTCCGTTGTACAAAGAAGTCAATACTTGTAGGCGGCAGGCGTCATTACA
ACCTTCACTGTTGTAAAGACTGTGAATTTCAACAGCCATCTGCGGGGGAC
TTCCCAAATGATAGTCTTCTTTGAAGTTATGTACTCCGTATATTTTAAAA
AATAACTTCCAGCAGCGGTATGTCTAGATTGAATACTCCTCAAGTTGTCG
TTGATGGCCTCTCTTTATGTTGTTGTCCTGCCTGTTCGCGTTTGTCCGTG
CCCGTATATCTGTTTTGCGTCGTTCCCAGCATCAACCAATGGAACGGACA
CGGCCAGTGTTGCCCCATCTGTAAGGTCCCATTGCCGCCGAAGCTACTGC
AGCTGTACTACGAGCCCGAACAAAGTTCTGTGGATGACACAGCCAACGGC
TGCACGTCACGATGTGGGACGAGGGACACCGAGGATGTCGCTGCAGAAGT
CACAAACCTCCGAAGAAAACTGGCCAGCAGCAACAAGGTACTACAGTACT
GCTGTTGACGGGGCAAATAACCTTCGCGAGATCCCGGGGTCGCGTCTCCG
TAGGCTGCGCATGATGTTCGAGTTTGGCTCGACGCTCGAACTACTGCACG
CCCTATGTTTGAGCAACAGCAGTAGTAAATAAATTCCTCTCGAACGCTGT
GCGCAGAGGGGGCTCAAGGGCTCGAGCTCTTGTACACGCCGCAAGTGGGT
AGATGTAGCAGTCTGCATGACCTTCGGCAAAACGAAACCGTCGAGTACTT
GGTTCCTCGCCTCTTTTGTACGCGACGTCTGTCAGTAGCACGGTTTGTAC
CTCGGTGCTTCAAGTCAGCGTGTCCGCGGAACTGCATTAAGACGCAACCC
TGGGCGCCGGTCGGTGGTTCGACGGGCGAAACCGCAGACCACAGAAAAGG
GTGCCAATTACGACGGGATGTAGTGTACGGGGGTTCGAATCCGATCTTGG
TGTCAGGAAGATCTTGGGCCATCGGCTTTCTCTTTTGTTTACGCTTGTAC
TATTGTTCGGTTACCTCGCGCACTAGAAGGAGAAAGGAAGGAGAACGAAA
GTGAGAGAGACCGCTGCCCACACATTTTGCTGACGCGCGCACACACACAC
CCTCGGAAGGAACGAGAGTTTTCCCAAACCAGTGTATAGTCAGCGCTCTC
CCAAGCCACACGTTCAGATTCATCAGAACATCCCCGCGGCTCCAGAAACA
GCAAGCGCCTTCGCCAAGATATCTGCGCGTTGTTCCTCAGCTGGAATGCA
TTCTACCGTAATCTCGTTGACTTCGTTCGGCCTTGGGCTTTCCCCGAAGA
ACGAGGCGTCTCATCTGGTGGGGGAAAATGATCCTTTGTCTCAGTTAGCA
GCGTTGGCGAGGGGCAGAGAGAGGCCTGCCTTCGAGATTGCTGGTGATGG
CGGCGTTGTGGGATTCGAACCGCAACACCGTACCCCTTGGAGTATATTTT
GTCATTTAGCACCCGTTTTACCTCTTCTGTGCTACATATATGCATGCGCT
CCTTTTCAAGTCGGCCGATGCCGTTCTCAGTAGATGAACAGAGAGGTAGC
TCGCGCGCGCGCACCCCTCGGGGTTGGCTGTCGCTGTCGGCTCCGGCACC
GGGACAAGCGTGCTCTGACCACCCCAAGAAGGCACAGATAAGGGCTACTG
CTCTGTTGCGGTAATTACCTGATGCATGCGTGCACATTCAGGGTATCCAA
ACCTTGACCTTCTGCTGCGCGCTTGACTGCATTCATCCGGCTAGCGTATA
TCGAGCATAAAGCTCTTGGGGGCGCGCTACGGATACAAGAGCCAAATCAT
GACAAAGGCACGTGAATCCGTAAAACGTAGATCGCTGATTCCCGCCCATT
TTATTCGTTGTTTTGGTTCTTTGCAGAGGGTTCAAGCTGAAGACAGCGCA
CGCTAAGCAATGCGAGGAGGTACGAGTCTTGGAATATAAGCTCGCCCACG
CGGTGCCTCGCCATCACGACGCTTAAGAAGGACGTGGAGACGACAAAGAT
TGATTTGGTAAGGGGCGGTCGGCTCTGGCTCGCGACTCTTCTGGCAACCT
CGACTTATGCTCTCTCTTCCCACTCTTTCTCGCGACCCGCTTGTATGGGT
GCTTTGTGTACAGCGGGTGAGGCATGCCCGATCTATGGTCTCCTATCCGA
GACACGCTAAGTTGACACAAGTTCACCACGCTTGTTCCTGTGTACAGCTG
TAGTTCTGAGTGCAGATCGGGTTTTTTGACGGCTTGCAGAGAAGGCGTGA
CTATTGTGTCACCAGGGAAAGTGTTGATGGCAGCCGTTGCCAAGACTGTT
TAACCCGGACGAAATACTTGTTTTGGATGCTCCAAGATGGGGATGGGCAT
CACGTGTCCTGTAAGGCGTCTAGCTTCGTCCACCATACCACGAAAAACTG
CATCACCTGGCGGGGTGTGCAACGGCAATGCTGAAGTGATGCGGGGAGGA
CCCAGCTCTAGGCTGATCGAATCGATCACGCCAGAGGTGCAGACATCCGG
ATGATGCGCTGAACGCTTGACCGTTATTCGCCCACGTTTTGTCACCACCC
ACACCCAGATCAAGAAGCAGGGGGGATCATAACAAGCTTATGCGAGAGAT
GCAAGGGCACAGTAAGCGGCTACGCGAGTTGGAGGGAGAAGGTTGCTAAC
AGCTACTTGAGCCAGTTTTCGTCTCCGACGAAGGGGCGGCCGCTCGGCGG
GTTGGGCCAGGCAAGTTTCCTCGTATAGTCGCGCGTCAGAAATAGTGCCG
TGGTACAGACGCCTACCTCGATAACGGAACCGCTCACTGCATCGAAAATT
GCATCAGAGCCGCCACGCCACTCCCCCACAGTCGTTGTTTTCCTGGGTAA
GAAATCTGCATTCCTACAAGCTGTTAGCGAACTTGGCTTTTGGCATCACG
GTCGTCTTATCTAAGAAGGCTTGTCTAAGAAGGCGTGGTTTTGCTACCAT
GGCAGCACGCTCGCGTCGCGGATGGATCCACATGTGTCGCGGTTGAAGGC
CTCGATCACCAAGGTGGTGGTGTTTTTTTTTGTTTTTTTTTGTCTTTTTG
CTCTGCTCATAGGGGAGAGGGAAGGCCCGGCCCTCGCGTTGCACCTGGCG
AGAGAAAATGAAGAATCGTACCGAAAGAAAAATAATGGGTATCACACCCA
TTTAGCGGCGGCGGCGCAAACAGCAACGCGAAAAAACCGTGTCAAAGACA
TACCCGCATTTCTGCTCACGGAGCCCCTCGGTAAGGCTTTTCGGAGATGT
CGCGGTCTGGGTCTGGAAGAATTGATGAAATGCGGCTGGCGTTCGGGGGG
AGTGTAGGCCATGCACCGCAGACCGCGATGCCTTGAACTAAGCCTTTGGA
TCAACACTACAGCCAGAGGTATCGCGAAAGAATGGCTACCCTCAAACCTT
TAGCGTAGGGGAAAGGGAAGGGCCATGCCTTCGCGATATATATTTGGCGC
GAACAGTGAAGAGGACATTTATTTTTACCACAGCAGTTCACATAAACCCG
CACCTTGTCGTGTGTTACGGACGAACATTGGAGAAGTGTCAGCGCGCATC
GCAGCCCACCCCGGCGCCTGTGCGTGCGCCGGGCTTCTGGCGGCCCCCAA
CATCGCAGAAACTCTTTATCTTGTAGTTTCTCGAGAACCTTGAAATCGCG
TGAGAGGGAGTCTCGCCCAGATGGTCCCGTGGACCGCGGGGTCTGAGCCA
TTTTGTCAGTTTGGCATTTAGTTGCCCTTCTTTCGCTCCTTCCATTGACA
GTTTCGAGTTTGATGGCCGCGAGGGCGCCAAGGGTTGTAGACGATGTTGC
TGTTGCCAGGATTGCCTGGATAAACGCCAACGAAAAACACTACCAAAACC
CAACATCTGTCTTGTCTGATAACCAGCATTGTACAATGCTGCCTCCTCTC
GCTCTCGCTCTCTCTCACCATCCTCTATGCATCGCATGATTTTGTTTTTC
AGACCGACGTGGAGAGAGTTCTCGAGCAGATCCGCCAAGGCAATGCACAG
GCCGACACGGTGATCAGGGGCCAGCACGAGCAGCTCACCAGGTCGATCGA
GAGAGAGCAGAAAGTCAAGCGGGAATTGGTGAGGATTGATTGCATTTTTG
TTTTTCTAAACCGCCAAGTATACGTATGGATACTCTTACTTCGCTGTACG
ACCTTTTTTTTTACGCCCGATTGATGAAAAACAAAGCGGTTTGAATGCGT
CCTAGAAATACTCGCGGAGGCGTGTGCCAGCAAACAAACAAAAAATAAGA
ACCGCGTCTGCGAGGCAAAACAATCCCAAGCGGTTGCCCTCTCTTCGTGT
CTTGGTTCGGTCTTTGTCTTTGGACATGTAGACATTTAGACCAACGTAGT
CGAGATTGTGAGACCAGACATATACCGAACCAAACGGCGATCGAGACGCA
AATTAAACGGTGCAGGGCAGAGCATCTTCAACGGAAAACGGCTTGCAGCA
CGCCCTAGACAATGGACCACTCAGTGGCAACAGACAATACTAATGTTGCG
CTGCAAAATACTAGTACACCACAGCAGCGTCTATTGCAACATCTGTTGAT
CGATGTGATTCGTCAAATCTGTCGCCGACAACAATGTCTATCGATAGTCA
GCGCAATAGTTCATTGTGGCTTGCAATGCCTATCGATAGTTAGGGCAAAA
CTCCATTGTGACGACAATGTCCATCGAGGCCGGCTTTTGCCACACACAAA
AATAAAGATAATGCCCCGTGAGGGGGAACGACTCAGAACAGCCAGGCTTA
ACGGAGCAATTTTTCTTGTAAGCTGTTGGCCGCGCTTATGAGTTAGTTGG
TTCAGGACGAACCTTTTATGGATATCGTAATATCTCGGACATCTAACTAG
CAATCAAGAGGGAGCGGAGCGTGTCAATAGGTTCGTCGTTGCATAGCCGA
GCCTCGCGAACCATGGACCCGTCCGCCGCTTCTTCTCGCTCATGCGCGAG
GAGTTCGACTTGGGCGGCAAGAACAGGACACATTGTTGGCATGTACTGTA
ACGTTGATCGCATCACCTCTTGTGAGTTCGTGTTAACGCTTGTACTGTTT
GGGCGCAAGACATTTCGTGTCTATATCTGGCTCTTGTTTGGGTACTTGGC
GTTGGTGCTCCGTGTATGGGTGAACTCTGCCTTCCACTCTTGACGATAGA
AAGGGAATAGAACACTGCCGCAACAGCTGTCATCAAAGAGTGGTTGACAG
CAGACATCGCCGGCCAGAATAGATGTCAAATGCTGTCTGTCGATAGATAT
ATTGTTGTCGACAATAGATTTCAAACGCTGTCCTTCGATAGACATTGTTG
TAAACGATAAATTTCGAACGCTATCTGCCGATAAACAATGCTGTCGACAA
TTACGTTTGAGCAAGCCGTTTATTGATGGGCATTCTGTAGTAAACAATAT
ATCCCGAACGCGCTCTTCTGATAGATTTTATTCGCAACAATAATGAATGG
GGGGGGCCAATGGTCACAATTCTTCGCAGCACTCGTAGAGTAGCAGCGTC
GTGCAGCCATCAACGACTATTGTTCGAAACAACGCACTTCCGAACAGCAT
CGCCATAGACATTGGTTCTGGTATTCACCATAGACCAATAGAGTAGAGTT
AAACGCCCGCCGGGTAGCCATATAGTCGACGATGAATGGATACACATTAT
GGTCTATTCCACCCCTCTACCACAACTATTCCCACGAAAATTTTATTGCG
ATAGGGTCTCGCTGCAGATTCGCGTTCAAGGCCGCCTCGCGCGCCCCGCC
CTCGTGACGTCATGAGTTTTTCCGATGGCCACGGAAGATTACATGGCTCT
CTTGCATGTGCTGCAATGCATTTGTTGGGTGCCGTCCCTCATCGTGTCTG
TTTTTTGTGTTTTACCAGCACTACTGAACAGACAGTGAAGTCGAGTACGG
CAGAAGCTTATTTGGGGCTGTTAAGGGAATCAGCAGGCATATTTATGGAT
GGGAATAGAAGTGCTTCAGGTGAAAAGATACGGCAGGCATACGACCGTTG
AAATCAGGTCAGATAGGAGAGAAGACGTATATGTTGGAGAAAATATTCGG
CCAGAAGAGGCCCAAAACAACCCGCCTGCGTGCAGGACATTTGATTTTGT
CCCCATCAACGACTGTTGAATGGGGAAGAGCAGTCCGTGACCATTGTGTT
TTTCTGGTGTGGACCCAAAGTGTCATGAAATTGTTTACGGAGAAGTTTAC
AACTATCCTCGCCATTTTGGATAGGAGCTGTTCACAATGTGTTGCTAGAG
ATAGATCGAGCTGAAACCGCGCTTTCTTTCCTGGCATGGCATCCTGCGCC
ATGCAGGTGTCTCCGTAAATGGAATACAGCCACAGGAGCAGGAGGGAACA
CAGCAACACAGCTGCAGCAACACACACACACACACACACACACACACAGG
TGCCCAGATAGTGTGCGTCTCTTGCAAAGGTTTTGTAGAGAGGTCTACTT
TCCTATTGTTTTGGGCTTCTCCCAGGATTCTTCGTCGAATTTTTGTCCCC
TTTCGGGGACTTTGATTTTAGGGAAATCGACAAAAAAGGGTATACCCTGT
GGATTCTTGAACAAAATCGGGTACCATTTTTTCGGAGCGGGGCGCGCTAC
CGTCCGCCCCTGAACGCCTCTAAATCGCGTTCCGAAGTCTCTATACACCG
GGCATGGTGTGTGGGCAGCACCCCAAGCCGTTTTTTCGTCTTCGACACCC
CAGAACAGCACAAATACTGGCGCCCAAAACTTCCTCTCCGCAGAAACCCG
ATTTTGTTCATAAACCACCAGGGTATACCCATGCCTGTGCTAAAAGTTCA
TAAACTACCCTATTTGTTCATAGCATACCCCCTTTTGTTCAACAGCACTA
CCCGTTTTTGTTCAACAGCCTCCTCCCGCGGAGAAATGGACCGTCCATCT
TTCCGCAACCAGCAAGCAAGATCCTGCAACCAACAACCGAAAAATCGGCA
AGTTGCCCGAGGCGGTGACGACGTCGATGATGCGACTGCACTGCTACTGC
TGCTGTAGGAACGCACAACAAAAGATCCGCCGTGTCAGAGAACCAAAAAA
CGACGGACGGCGGGACACTCCCGAGCCGCACACACACCCTCTCGCCGTGC
TTTCTCTTGCCCACACCTAATCCCTTCTCACCTACATTAGATAAACAGCT
CAAGTTAAAGTACACAACACGTGCGGTCATCATCGGTGCTCCCTGCCGAA
AACAATCTGACAATCTGACGCCCTGACTGACAGAAATGAATGGTGTATAA
TATGGGGTACGGTTATAGATAGATACCCCAGCATATACTACTCAACACGC
CATACCCAACCCGCCCCCGGCCAACACCACCAAACGAGAAGATTATGGGG
GCAAAATATCGGTGAAATGGAGTGATGTTAACCTCGTATTGACTGGTATG
AGTTTGATTGACATCGGTAGCACCCACATGGACGGGAGGCGTGTGTGCGG
CTCGGGAGTGTCCCGCCGTCCGTCGTTTTTGGTTCTCTGACACGGCGGAT
CTTTTGTTGTGCGTTCCTACAGCAGCAGTAGCAGTGCAGTCGCATCATCG
ACGTCGTCACCGCCTCGGGCAACTTGCCGATTTTTCGGTTGTTGGTTGCA
GGATCTTCTTGCTGGTTTGCGGAAAGATGGACGGTCCATTTCTCCGCGGG
AGGAGGCTGTTGAACAAAAACGGGTAGTGCTGTTGAACAAAAGGGGGTAT
GCTATGAACAAATAGGGTAGTTTATGAACTTTTAGCACAGGCATGGGTAT
ACCCTGGTGGTTTATGAACAACATCAGGTGCTCTGCGGAGAGGAAGTTTT
GGGCGCCAGTATTTGTGCTGTTCTGGGGTGTCGAAGACGAAAAAACGGCT
TGGGGTGCTGCCCACACACCATGCCCGGTGTATAGAGACTTCGGAACGCG
ATTTAGAGGCGTTCAGGGGGCGGACGGTAGCGCGCCCCGCTCCGAAAAAA
TGGTACCCGATTTTGTTCAAGAATCCACAGGGTATACCCTTTTTTGTCGA
TTTCCCTTGATTTTACCCGCTGACACTGACGTATTTTCATTGGTCAGCCG
GTTAGCGACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGA
GCGCACGCAGGGGAGCCAGGAGGCGGGATGGCAGTGGCGAGAAGGCAAAC
AAACACACATCACACGCAATGAGACACGCATAGGCAGTCAGAGATAGAGA
GGTTGAGAGACGGAGAGCGGAGAAAGAGGAGTGGAGAGGAAAAAGAGAGA
TAACACACGTCCCCTCCCTCTTCCTGCTTTTTGTTTTGTTCGTGTGGCAA
TGATGATCACACACACTCGAGAACAACCGCTTTGGTTTTCTTTTCAGGCT
TTAGACAGAAAGAGAGACGTAGGCGGACAGAGGGAGAGAGAGGCTCTCAG
TCTCCTACCCTACTGCTGTACGAACATCTGCGTCTTTTGTTCGGCAGACC
CTTGGCGTATGTACAGCTACAGCTAGAGGCTACATATCTCATTTCTATAC
GCCCCTCTCTAGTTGGCCTGCTCTTTCTCGAGTGGTTTTCTTGTATTTTG
AGCGCTGCATACGGTATTACGCACCACCCTGTTTTTCTGTGCTTGGCCCC
CGCTTGAAGACGCAGCAGCCTCCTGCAGGCACTCGTTTTTCAAGCAAAAA
GTAAGGTGATTCCCCAGAGTCTATTACGCTGAATAGTCCGCTGTGCCTAA
GCACGTGACGTCACGCAATAAAGAACACCACACCGTGCCTTCTCTGGTTC
CTCATTGGGGTTGAGAAAGTGTGGACGATTTGGAGTACAGATATCGCGTA
GTTCGATTTCATTATGACAGGCGTACAAACGCACAACATATGTCGATGGC
TTCCTCAGCAGCATTTTTTTACCCTGTGCTCACGCGCAGGATGTCCTGAT
TCTGGCAATGGTTGAAACGCAAATTTCCTCCGTTGTTTGGGCGCTCTCGC
CCCCCCCCCCACTCTGGGCGTGGTCCGAACATATTTGTTTTCACAGCAGT
CTGCGCTTCCCTCCATTCGCTTCTGGACCTATCCGTTGTGTCACGCACTC
GAGAAGATTCTTCGTTCCTTGTTTGAAAAATCGCCGACATAACATAGCCT
ATGACCCTTGTGCTGCCTGCGTACCCCGCTTCGACCCTTGTTTCGAATTC
CGGCGACGGCAGCGCAAATTGAAGCTAGAGTGCGAGACGATGGCGTTTGA
CCTGCACCAAGCGCGGTCCAAACTCGTCAAGGCCGAAACCTTGGTCAAAC
GCTGGGAGAAAGCCCTCACCAAGACCAAGATGCAGGCGCCAGATAGGGAA
ACAACACATCCCCCCAGCCCCTCGGACAAAGATAAGTTGGCTCTCGCCCG
CAAGTTGGTCAAGCGGAATCTGGCCAACCACGCCAAGGATAGCAACCGGT
CTACACCGGGGGCTACGGCTAACCAGGATGCGGTGCCAAGTAAGTCTCTC
ATGTGTTGGTTCTCAGGGTGATTTTTGGGAGGGAGGTGTCCGCTCTGAAT
AATATTCTCGTTTCAACTTGGCGCGGTTGTCAGTAGATTTTGGACCGATT
TCTTACTCGCGCGTACGTAATGGCCTCAATGTCCAATATTTCCGCTATAC
TTGTAGCAGTACCCTCGGTGCATGCGCACGCCCTGGATGGCTTGCTCACC
TGCTACATTCTTGGCCTTGTCGCCGAAAATTCTCCACCGGGTCATTTTTG
TCATTTTAGGTAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAGAATTCC
AAGAGAAAGAGGACCGACGATGATAAGGAGGAGATCGACCTGGTGTCACT
CGGATCAGGCGACAGCAGCGGCGACAGCGGCGCCGACGAGGCAAAAGACG
GCGCCCACGGCGGTGCCAAGAAAGAATCCAAGAGGTATAGATTTCCAAAT
GTCTCTCGTGGCGCCGTCGGTGGCGTTTCGTTGGAAATGGCCACGATGCT
GACCCGTGTGCCATCCTCGCGAAGTTTCCTCTCGTCGGCGGCGGCAGCGG
CAAGAGGGGGAGCAGGAGCGCAGCCCAAGCGCAATCCTTCAACGTGAGCT
AAATTTACCTGTGCATTATGTCGAGGTTTTGCTACGAGTTGTACCTGTTT
TTCTGCCCTTTCCTCGCGTGAGCGCATCGTCTCTCAAAGCAGTGTAGTTC
CTGTACGCCAACACCCTCCGTAGGCAAGCTGTTGATTCTCGTTGTAGGCG
GGGAAGATCATGCTGCAAGTGGAATGCTTCGCATCTACTCTACCCCCCCC
TCTCTTCCGCCATATCCTACGAGTCCCCGCCTGAGTCGAAATCAGAGGTA
GGCGGGGATACTAATATTAGCAAGAAATGAACACACGGAGCTAAAGGCCT
CGTTGGCGTCTTCCGAGAAATGCACACGCCACATACACTTCACGATAGAG
GAACGACGCGCGGAACGACGTGCGGTTCTGTTCTCTTGCTCATATCTTGA
ATTTTGATTCCGTCTCACCGATTTCGAAGAACCTCCCTGGCTGAACGCAG
TTACGATGGATCCTGCTCTTCCTTCACCCACAAGAACAACAACCAACATA
TCAACAGCGGTAAACGCTGACAATTGTGCAGGGTATACCGCGTTGTATTT
CTGTTTCGCCACCGTTTCTGTGTTCCCCTCGTGATGTGATGTGGATGTTC
TTTTCGCGAAGCAAGATCTCCCATGGTTATTTCAATGGTAGCGCGGGCAT
CTTAAGAAACTCTTCTAGTATCATATTTGCAGGTCGTCCCGATGGTCTAG
TCGGTAACACCTAACCTCGCTTTGTACCTAGCAGTGGAACACTAGTTCGT
GTCTACATTGAGGGAAGAGATCCGGGGAACTCTCCTCGCGTAAAAAATTG
AAGGAATGTCCCTACCGCAGGAGGGCGGTTGGGGGGCCTGAGGGCGAGGA
ACCTGCTGTGTGACCCCGGCTAGCAGCGCCAAAAGAAATGAAAAAAAAAA
TGGAGCAGGGAAATTCAATGTTTTGGAGGCCATTTCGGGGATTGTCGCGG
GGAGGGGGGTAAATCGTGCGTCCAGAATCGCGCAGTGTTCCACGCATTGG
AGCGGTGGTAGATTGTTGGCGTCTGTTGAACGTTTAGTAAGCATAGCATG
GATATCGAAGCACGAGGCAAACATCACGCTAGAGCGTCAAATGATGGCTC
AAGTAACTGTTCCTAAGATAGTCAGGGAGACGGTACTTTTAGGATGTGCC
TTGTTGCATTTGTTCGGACCCTTCACCCCTCTCGACGCGGTTCGTGATTG
CAAGCGGCTTGTCGTGGAGCATTACTTCGCTTTCTGCTGTGGCATTTCAT
TGCAACACATCTGTCTCTTCTTTTGTACGGTTGTCTGTTATCTATTTGTC
AGTACCAGAGCGAACCCCTCACGACCAACTTCACTACCCACCAAAACAGC
GTGCGTACACTGACAAGCACAGACAAGCACAGCATCGCCCCTCCCGCCCC
TACTCTCTGCATCAACCTTTTACATGTACAGGCTCATAAACAAGGGCTTC
AACGCGGTGGGCGGAAGGCATCAAGTACGGCCTTCCTCTTCCTCTTCGAA
CGCCGTGTTTTGCCTCGGCGGCAAGCAGAGCCGGCTAGGTGAAACCTCGC
GCACCCGCACTCTGTAGCGCTTCTAAGAAACCGATCCTCTTGATTTTTCT
GTTTACAACAACGTGCGGATGTCTCGTGAAGAGCTGTGAGGAAGGCGTTT
CGGCCCCATGCCTGGGAAACGTCACAGTACCTGCTGTCTCAGAGTTTTTT
TTGCGGAGATTTTTTGCAATATTTGTAGTCTCCGTTGTTTTCAGGAGGCG
AAGCGGCGACGTGGCAGCAGGTGCTTGGGCCAGGAAAAGAAGCCTTCCAG
TTCCTTCTCCGGAGACATCTATGCCTATCTTTCTGAGCAAGGTTCAGAGT
TGGCGACCGTCTGGAGTTGTTTTTGGGCCTCCGGCAGTTTGGCGTAAACA
GCTGGTGGTCCTCGTTCGAGGATACTACACGTACCTTTCAAGGGTTTTTA
GTATTTCCTCGGTACTTTTCCCCTGTTTTTTTTGTTGTCTTTTCGGGTTG
GAACGGAAGCACTTGCATCGCACAGAAAGGTCAGTGATGCCGGCAGGAGT
ACTAAAACGTTGATTGCAGTAATCAATTCGCGTGCCAACGGGGCAGGTGC
GATTGACAAAACTGGCAACCAACCATAACGAAAAAAAGAGCTCTCGGTGT
AGGGACAGGCCAATCCAACAGTCGTGCACATATCATCCTGTGCTGTACCC
TGGACCCTTCCTCGGGGAAGCGTCCGTACCTTCACCTTAATATCGCCAGT
GTTGGGAGGATGATAGATTGTGCTTGCTCTTTTCTAGTCTTGGCCTGGAG
AACTGGAAATGGCGGGTTGTCCACCTCACGTGGCGTGGGGGGAGAGCGGC
CGGCAACCTTCTACAAGTGTACCGGTACCCGTTGTTGTCGTCGTGGTCAG
AATCAGAATCTGTTGGACAGCGGGGCGTAAAGCCCAGTCTGGAATGTGTC
GGGATAAGCTGTTCGTTTGGGTAGTAGGTAGTAATGAGTGTGTATAGAGC
CCATCTTGGTGCTGCTGTGCTTGGAGTTGTGTTTCTGTCGTAAAAGGTCC
CGCTTTCTTCACTTGACCTGTGACCCCAACAACCTTTCCTCAATCATTTA
TGCGGTGTCTTTTGGCCTACTATTATTGCCTACAAAGGAAGAGCGTGGGG
CCATCGACTCTGTGTGCTTTATGCAACGTTTATCTAGGAATGGAATACTA
CCACCTGAGGTGGGAACGTCATTTGCCTAGCCCCAAACTTCTTACGGATA
CTTCATGCTGTGTACGA back to topCoding sequence (CDS) from alignment at P-lacustris_contig1075:32591..46007+ >mRNA_P-lacustris_contig1075.656.1 ID=mRNA_P-lacustris_contig1075.656.1|Name=mRNA_P-lacustris_contig1075.656.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1440bp|location=Sequence derived from alignment at P-lacustris_contig1075:32591..46007+ (Pleurocladia lacustris SAG_25_93) ATGGCGTTTGACCTGCACCAAGCGCGGTCCAAACTCGTCAAGGCCGAAAC CTTGGTCAAACGCTGGGAGAAAGCCCTCACCAAGACCAAGATGCAGGCGC CAGATAGGGAAACAACACATCCCCCCAGCCCCTCGGACAAAGATAAGTTG GCTCTCGCCCGCAAGTTGGTCAAGCGGAATCTGGCCAACCACGCCAAGGA TAGCAACCGGTCTACACCGGGGGCTACGGCTAACCAGGATGCGGTGCCAA ATGGCGTTTGACCTGCACCAAGCGCGGTCCAAACTCGTCAAGGCCGAAAC CTTGGTCAAACGCTGGGAGAAAGCCCTCACCAAGACCAAGATGCAGGCGC CAGATAGGGAAACAACACATCCCCCCAGCCCCTCGGACAAAGATAAGTTG GCTCTCGCCCGCAAGTTGGTCAAGCGGAATCTGGCCAACCACGCCAAGGA TAGCAACCGGTCTACACCGGGGGCTACGGCTAACCAGGATGCGGTGCCAA GTAAAAAAAAAAAAGAAAAAGAAAAAGAAAAGAAGAATTCCAAGAGAAAG AGGACCGACGATGATAAGGAGGAGATCGACCTGGTGTCACTCGGATCAGG CGACAGCAGCGGCGACAGCGGCGCCGACGAGGCAAAAGACGGCGCCCACG GCGGTGCCAAGAAAGAATCCAAGAGGTATAGATTTCCAAATGTCTCTCGT GGCGCCGTCGGTGGCGTTTCGTTGGAAATGGCCACGATGCTGACCCGTGT GCCATCCTCGCGAAGTTTCCTCTCGTCGGCGGCGGCAGCGGCAAGAGGGG GAGCAGGAGCGCAGCCCAAGCGCAATCCTTCAACGTAAAAAAAAAAAAGA AAAAGAAAAAGAAAAGAAGAATTCCAAGAGAAAGAGGACCGACGATGATA AGGAGGAGATCGACCTGGTGTCACTCGGATCAGGCGACAGCAGCGGCGAC AGCGGCGCCGACGAGGCAAAAGACGGCGCCCACGGCGGTGCCAAGAAAGA ATCCAAGAGGTATAGATTTCCAAATGTCTCTCGTGGCGCCGTCGGTGGCG TTTCGTTGGAAATGGCCACGATGCTGACCCGTGTGCCATCCTCGCGAAGT TTCCTCTCGTCGGCGGCGGCAGCGGCAAGAGGGGGAGCAGGAGCGCAGCC CAAGCGCAATCCTTCAACGCTCATAAACAAGGGCTTCAACGCGGTGGGCG GAAGGCATCAAGTACGGCCTTCCTCTTCCTCTTCGAACGCCGTGTTTTGC CTCGGCGGCAAGCAGAGCCGGCTAGGTGAAACCTCGCGCACCCGCACTCT GTAGGCTCATAAACAAGGGCTTCAACGCGGTGGGCGGAAGGCATCAAGTA CGGCCTTCCTCTTCCTCTTCGAACGCCGTGTTTTGCCTCGGCGGCAAGCA GAGCCGGCTAGGTGAAACCTCGCGCACCCGCACTCTGTAG back to top
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