prot_P-lacustris_contig1061.566.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1061.566.1
Unique Nameprot_P-lacustris_contig1061.566.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length359
Homology
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BLAST of mRNA_P-lacustris_contig1061.566.1 vs. uniprot
Match: D7FHF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF3_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.320e-28
Identity = 72/95 (75.79%), Postives = 72/95 (75.79%), Query Frame = 0 
Query:  135 PLGTGAWPPELLEAAQAAGLTLPPGAGRVGGSGGGT------HSPPGHPGGHRIGGGARAGGTILRMTIPGMVDEDSPAGPGVRIQLMSTRREMP 223
            PLG GAWPPELLEAAQAAGLTLPPGAGRV G           H   G     RI  GARAGGTILRMTIPGMVDEDSPAGPGVRIQLMSTRREMP
Sbjct:  113 PLGVGAWPPELLEAAQAAGLTLPPGAGRVSGXXXXXXXXXXXHPHGGXXXXXRIXXGARAGGTILRMTIPGMVDEDSPAGPGVRIQLMSTRREMP 207
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BLAST of mRNA_P-lacustris_contig1061.566.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 4.130e-27
Identity = 100/146 (68.49%), Postives = 101/146 (69.18%), Query Frame = 0 
Query:   91 GPISGGLDAAAALERELSLLRHARAAQAAHAXXXXXXXXXXXXXP-----LGTGAWPPELLEAAQAAGLTLPPGAGRVGGSGGGT--------HSPPGHPGGHRIGGGARAGGTILRMTIPGMVDEDSPAGPGVRIQLMSTRREMP 223
            GP S  LDAAAALERELSLLRHARAAQ    XXXXXXXXXXXXX      LG GAWPPELLEAAQAAGLTLPPGAGR G              H   G PGGHRIGGG+RAG            DEDSPAGPGVRIQLMSTRREMP
Sbjct:  258 GPSSRNLDAAAALERELSLLRHARAAQXXXXXXXXXXXXXXXXXXXXXXLLGVGAWPPELLEAAQAAGLTLPPGAGRAGDXXXXXXXXXXXXXHPHGGPPGGHRIGGGSRAG------------DEDSPAGPGVRIQLMSTRREMP 391
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1061.566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHF3_ECTSI1.320e-2875.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2P5_9PHAE4.130e-2768.49HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1061contigP-lacustris_contig1061:62370..64156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1061.566.1mRNA_P-lacustris_contig1061.566.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1061 62183..64416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1061.566.1 ID=prot_P-lacustris_contig1061.566.1|Name=mRNA_P-lacustris_contig1061.566.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=359bp
MQRAAAISRRSAGSTGASPPASSSFSGASAVRQAAMVAMERARAAAAAAS
SSASSRLTASRASGSKPSASASASAGSSTGLKTPHRGRSGGPISGGLDAA
AALERELSLLRHARAAQAAHAAAGGFAGGGGGGGPLGTGAWPPELLEAAQ
AAGLTLPPGAGRVGGSGGGTHSPPGHPGGHRIGGGARAGGTILRMTIPGM
VDEDSPAGPGVRIQLMSTRREMPPPPAAAGRHPPGAMQQQQSRSQGSLGQ
GQGEPQRRPLPTRSTGGPGSSALGRPNSGGGGGGRPPNRGAASAAATATP
SAPTGASAKVRAKPGASAGRADGTRTGVKQGSTRGGRASRSSSSSGAGSV
SAGGTLAP*
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