prot_P-lacustris_contig106.551.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig106.551.1
Unique Nameprot_P-lacustris_contig106.551.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length186
Homology
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BLAST of mRNA_P-lacustris_contig106.551.1 vs. uniprot
Match: D8LC29_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC29_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 1.160e-80
Identity = 128/160 (80.00%), Postives = 140/160 (87.50%), Query Frame = 0 
Query:    2 GLRHVRIRDPPAVSRFWRWHGEGEGHICTAEATYLVLKDFEEATGLATEGGRLEDILFLFALVGSRIKAAYESDPSKLGMGFPSSEEAKLRHRVRRVRLDRLVKAKYRGLEAVRESNGDEAAIEEFFRRRRGESIYDAASMNVASWKEKPVEVCNEEEAV 161
            GLRHVRIR+PPAVS+FWRWH EGEGHICTAEATYLVLKDFEEATGL T GGRLEDILFLFAL+GSRIKAAYESDPSKLG   PSSEEAK R RVR V+LDRLVKAKY+GL+A+RE +GDEAAIEEFFRRRRGES+YDAAS   AS  ++PV  C E+  V
Sbjct:  162 GLRHVRIREPPAVSQFWRWHTEGEGHICTAEATYLVLKDFEEATGLVTRGGRLEDILFLFALMGSRIKAAYESDPSKLGKSCPSSEEAKQRRRVRLVQLDRLVKAKYKGLDALRERDGDEAAIEEFFRRRRGESVYDAASTTSASLAQQPVGDCTEQGEV 321
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig106.551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC29_ECTSI1.160e-8080.00tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig106contigP-lacustris_contig106:222007..224843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig106.551.1mRNA_P-lacustris_contig106.551.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig106 221479..235084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig106.551.1 ID=prot_P-lacustris_contig106.551.1|Name=mRNA_P-lacustris_contig106.551.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=186bp
MGLRHVRIRDPPAVSRFWRWHGEGEGHICTAEATYLVLKDFEEATGLATE
GGRLEDILFLFALVGSRIKAAYESDPSKLGMGFPSSEEAKLRHRVRRVRL
DRLVKAKYRGLEAVRESNGDEAAIEEFFRRRRGESIYDAASMNVASWKEK
PVEVCNEEEAVGVDDRTREQSNAKRNSGGGKDSIA*
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