prot_P-lacustris_contig1055.513.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig1055.513.1
Unique Name	prot_P-lacustris_contig1055.513.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	147

Homology

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A835ZG13_9STRA (Tctex-1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG13_9STRA)

HSP 1 Score: 139 bits (349), Expect = 7.210e-40
Identity = 65/96 (67.71%), Postives = 82/96 (85.42%), Query Frame = 0

Query:   45 RPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 140
            +P+YR++ASVN MREII+ +LE +L G+TY  D AT QTK ISD+IK+ LK M+L RYKYVVQV+IGEQRGEGVRMG RCFWD++TD+ ASE++IN
Sbjct:    1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFIN 96

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A7S2S8M8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8M8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.300e-35
Identity = 61/99 (61.62%), Postives = 80/99 (80.81%), Query Frame = 0

Query:   42 YQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 140
            YQ RP+Y+Q+ SV  M+ II  V++ EL+G+TY VDQA VQTK ISD+I+N LKA++LPRYK++VQVV+GE R EGVRMG R FWD+ETD+ A+  Y+N
Sbjct:   10 YQIRPAYKQRVSVAAMKTIIDTVMKEELEGKTYAVDQAQVQTKHISDEIRNRLKALDLPRYKFMVQVVLGEMRLEGVRMGCRTFWDAETDAHATSNYMN 108

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: D7FHW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW5_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.520e-35
Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 0

Query:   76 VDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRLV 144
            +DQATVQTK I D+IKNGLK MNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETD+VASETY+NVR+V
Sbjct:    1 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVNVRVV 69

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A7S2BCB7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCB7_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.250e-34
Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 0

Query:   20 GYLPVCTSAMSGGGAELGQQLMYQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 140
            G +P   + MS       +   YQ RP YRQ+ SVN M+ +IK V++ EL+G+TY  +    QT  I+D I+N L+ +  PRYK+ VQVVIGEQRGEGVRMG R FWD++TD+ ASETY+N
Sbjct:   21 GSVPTAAATMSAAS----KTPTYQIRPEYRQRISVNEMKVVIKSVVKEELEGKTYQTESVQDQTTAIADKIRNRLRDLQKPRYKFFVQVVIGEQRGEGVRMGCRTFWDADTDAYASETYVN 137

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A6H5L5Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z1_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 4.880e-34
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0

Query:   76 VDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 140
            +DQATVQTK I D+IKNGLK MNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETD+VASETY+N
Sbjct:    1 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 65

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A7S3MAW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAW9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.240e-33
Identity = 62/105 (59.05%), Postives = 75/105 (71.43%), Query Frame = 0

Query:   42 YQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRLVPV 146
            Y   P Y+ K  V   REIIK VL+S+L+   Y+++     TK ++DDIK+ LK + LPRYK VVQV IGEQRG+GVRMGSRCFWDS+TDS ASETY N  LV V
Sbjct:   14 YVIHPEYKNKFRVGPTREIIKEVLQSKLEKAQYNMETTQALTKQVADDIKDRLKDLVLPRYKIVVQVAIGEQRGQGVRMGSRCFWDSDTDSYASETYSNETLVCV 118

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: F0YJL5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJL5_AURAN)

HSP 1 Score: 118 bits (296), Expect = 1.180e-31
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 0

Query:   40 LMYQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 140
            ++ Q RP+Y  +AS   M+E+IK VL+  L G+TY  DQ   QTK I+D +K+ LK   LPRYK++VQVVIGEQRGEGVRMG R FWD +TD+ ASET+ N
Sbjct:    9 VLSQLRPAYGMRASPTKMKELIKEVLKESLSGQTYQGDQVQQQTKLIADTVKDKLKGELLPRYKFMVQVVIGEQRGEGVRMGCRTFWDRDTDTYASETFTN 109

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A507FCI1_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507FCI1_9FUNG)

HSP 1 Score: 117 bits (294), Expect = 2.990e-31
Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 0

Query:   41 MYQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINV 141
            +Y  RP+++QK     + ++I  +L   L G TYH D  +  T+ I+D+IKN LK ++LPRYKY+V VVIGE RGEGVRMG RCFWD++TD+VA +T+INV
Sbjct:   11 VYSIRPNFKQKFRPAIVTKLIHQILADRLTGATYHPDTCSQWTREIADEIKNRLKELDLPRYKYLVNVVIGEMRGEGVRMGCRCFWDADTDNVAQDTFINV 111

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A0G4EWI1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWI1_VITBC)

HSP 1 Score: 117 bits (292), Expect = 4.620e-31
Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 0

Query:   42 YQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRL 143
            Y T PSY+ K     ++EI++ VL ++L    YH DQ  V TK ++D++K+ LK ++LPRYK +VQVVIGEQRG+GVR+GSRCFWD +TD+  SE Y N  L
Sbjct:   10 YITHPSYKDKFRPQPVKEILREVLTAKLDQAQYHADQTPVLTKAVADEVKDRLKELHLPRYKLIVQVVIGEQRGQGVRVGSRCFWDGDTDTCVSEVYRNETL 111

[Close]

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A812LYX8_9DINO (DYNLT2B protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812LYX8_9DINO)

HSP 1 Score: 116 bits (291), Expect = 6.940e-31
Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 0

Query:   37 GQQLMYQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRL 143
            G +  Y   P Y+ K      REII+ VL+S+L   TY ++   + TK ++DDIK+ LK +NLPRYK VVQV IGEQ+G+GVRMG+RCFWD +TDS ASE Y N  L
Sbjct:    7 GDENTYVIHPEYKNKFRPGPTREIIRDVLQSKLDKATYSMETTQLLTKQVADDIKDRLKELNLPRYKIVVQVSIGEQKGQGVRMGTRCFWDGDTDSYASEMYCNESL 113

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZG13_9STRA	7.210e-40	67.71	Tctex-1 (Fragment) n=1 Tax=Tribonema minus TaxID=3...	[more]
A0A7S2S8M8_9STRA	1.300e-35	61.62	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
D7FHW5_ECTSI	1.520e-35	88.41	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2BCB7_9STRA	1.250e-34	51.24	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A6H5L5Z1_9PHAE	4.880e-34	89.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S3MAW9_9STRA	5.240e-33	59.05	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
F0YJL5_AURAN	1.180e-31	57.43	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A507FCI1_9FUNG	2.990e-31	53.47	Uncharacterized protein n=1 Tax=Spizellomyces sp. ...	[more]
A0A0G4EWI1_VITBC	4.620e-31	52.94	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]
A0A812LYX8_9DINO	6.940e-31	53.27	DYNLT2B protein n=2 Tax=unclassified Symbiodinium ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005334	Dynein light chain Tctex-1 like	PFAM	PF03645	Tctex-1	coord: 57..141 e-value: 1.9E-21 score: 76.2
IPR005334	Dynein light chain Tctex-1 like	PANTHER	PTHR21255	T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN	coord: 41..142
IPR038586	Tctex-1-like superfamily	GENE3D	3.30.1140.40		coord: 54..146 e-value: 2.6E-22 score: 80.6
None	No IPR available	PANTHER	PTHR21255:SF7	TCTEX1 DOMAIN-CONTAINING PROTEIN 2	coord: 41..142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig1055	contig	P-lacustris_contig1055:35403..36710 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig1055.513.1	mRNA_P-lacustris_contig1055.513.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig1055 35403..36710 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig1055.513.1 ID=prot_P-lacustris_contig1055.513.1|Name=mRNA_P-lacustris_contig1055.513.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=147bp
TSSRERRAKSYPCLYLSIQGYLPVCTSAMSGGGAELGQQLMYQTRPSYRQ
KASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLP
RYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRLVPVR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005334	Tctex-1-like
IPR038586	Tctex-1-like_sf