mRNA_P-lacustris_contig1055.513.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A835ZG13_9STRA (Tctex-1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG13_9STRA) HSP 1 Score: 139 bits (349), Expect = 7.210e-40 Identity = 65/96 (67.71%), Postives = 82/96 (85.42%), Query Frame = 1
Query: 133 RPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 420
+P+YR++ASVN MREII+ +LE +L G+TY D AT QTK ISD+IK+ LK M+L RYKYVVQV+IGEQRGEGVRMG RCFWD++TD+ ASE++IN
Sbjct: 1 QPAYRKRASVNQMREIIRAILEEQLSGQTYSGDVATAQTKKISDEIKDRLKTMSLDRYKYVVQVIIGEQRGEGVRMGCRCFWDADTDACASESFIN 96
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A7S2S8M8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8M8_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.300e-35 Identity = 61/99 (61.62%), Postives = 80/99 (80.81%), Query Frame = 1
Query: 124 YQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 420
YQ RP+Y+Q+ SV M+ II V++ EL+G+TY VDQA VQTK ISD+I+N LKA++LPRYK++VQVV+GE R EGVRMG R FWD+ETD+ A+ Y+N
Sbjct: 10 YQIRPAYKQRVSVAAMKTIIDTVMKEELEGKTYAVDQAQVQTKHISDEIRNRLKALDLPRYKFMVQVVLGEMRLEGVRMGCRTFWDAETDAHATSNYMN 108
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: D7FHW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW5_ECTSI) HSP 1 Score: 128 bits (322), Expect = 1.520e-35 Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 1
Query: 226 VDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRLV 432
+DQATVQTK I D+IKNGLK MNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETD+VASETY+NVR+V
Sbjct: 1 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVNVRVV 69
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A7S2BCB7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCB7_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.250e-34 Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 58 GYLPVCTSAMSGGGAELGQQLMYQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 420
G +P + MS + YQ RP YRQ+ SVN M+ +IK V++ EL+G+TY + QT I+D I+N L+ + PRYK+ VQVVIGEQRGEGVRMG R FWD++TD+ ASETY+N
Sbjct: 21 GSVPTAAATMSAAS----KTPTYQIRPEYRQRISVNEMKVVIKSVVKEELEGKTYQTESVQDQTTAIADKIRNRLRDLQKPRYKFFVQVVIGEQRGEGVRMGCRTFWDADTDAYASETYVN 137
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A6H5L5Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z1_9PHAE) HSP 1 Score: 123 bits (308), Expect = 4.880e-34 Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 1
Query: 226 VDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 420
+DQATVQTK I D+IKNGLK MNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETD+VASETY+N
Sbjct: 1 MDQATVQTKRICDEIKNGLKEMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDNVASETYVN 65
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A7S3MAW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAW9_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.240e-33 Identity = 62/105 (59.05%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 124 YQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRLVPV 438
Y P Y+ K V REIIK VL+S+L+ Y+++ TK ++DDIK+ LK + LPRYK VVQV IGEQRG+GVRMGSRCFWDS+TDS ASETY N LV V
Sbjct: 14 YVIHPEYKNKFRVGPTREIIKEVLQSKLEKAQYNMETTQALTKQVADDIKDRLKDLVLPRYKIVVQVAIGEQRGQGVRMGSRCFWDSDTDSYASETYSNETLVCV 118
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: F0YJL5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJL5_AURAN) HSP 1 Score: 118 bits (296), Expect = 1.180e-31 Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 118 LMYQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYIN 420
++ Q RP+Y +AS M+E+IK VL+ L G+TY DQ QTK I+D +K+ LK LPRYK++VQVVIGEQRGEGVRMG R FWD +TD+ ASET+ N
Sbjct: 9 VLSQLRPAYGMRASPTKMKELIKEVLKESLSGQTYQGDQVQQQTKLIADTVKDKLKGELLPRYKFMVQVVIGEQRGEGVRMGCRTFWDRDTDTYASETFTN 109
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A507FCI1_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507FCI1_9FUNG) HSP 1 Score: 117 bits (294), Expect = 2.990e-31 Identity = 54/101 (53.47%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 121 MYQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINV 423
+Y RP+++QK + ++I +L L G TYH D + T+ I+D+IKN LK ++LPRYKY+V VVIGE RGEGVRMG RCFWD++TD+VA +T+INV
Sbjct: 11 VYSIRPNFKQKFRPAIVTKLIHQILADRLTGATYHPDTCSQWTREIADEIKNRLKELDLPRYKYLVNVVIGEMRGEGVRMGCRCFWDADTDNVAQDTFINV 111
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A0G4EWI1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWI1_VITBC) HSP 1 Score: 117 bits (292), Expect = 4.620e-31 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 124 YQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRL 429
Y T PSY+ K ++EI++ VL ++L YH DQ V TK ++D++K+ LK ++LPRYK +VQVVIGEQRG+GVR+GSRCFWD +TD+ SE Y N L
Sbjct: 10 YITHPSYKDKFRPQPVKEILREVLTAKLDQAQYHADQTPVLTKAVADEVKDRLKELHLPRYKLIVQVVIGEQRGQGVRVGSRCFWDGDTDTCVSEVYRNETL 111
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Match: A0A812LYX8_9DINO (DYNLT2B protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812LYX8_9DINO) HSP 1 Score: 116 bits (291), Expect = 6.940e-31 Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 1
Query: 109 GQQLMYQTRPSYRQKASVNTMREIIKGVLESELQGRTYHVDQATVQTKTISDDIKNGLKAMNLPRYKYVVQVVIGEQRGEGVRMGSRCFWDSETDSVASETYINVRL 429
G + Y P Y+ K REII+ VL+S+L TY ++ + TK ++DDIK+ LK +NLPRYK VVQV IGEQ+G+GVRMG+RCFWD +TDS ASE Y N L
Sbjct: 7 GDENTYVIHPEYKNKFRPGPTREIIRDVLQSKLDKATYSMETTQLLTKQVADDIKDRLKELNLPRYKIVVQVSIGEQKGQGVRMGTRCFWDGDTDSYASEMYCNESL 113 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1055.513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1055.513.1 >prot_P-lacustris_contig1055.513.1 ID=prot_P-lacustris_contig1055.513.1|Name=mRNA_P-lacustris_contig1055.513.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=147bp TSSRERRAKSYPCLYLSIQGYLPVCTSAMSGGGAELGQQLMYQTRPSYRQback to top mRNA from alignment at P-lacustris_contig1055:35403..36710- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1055.513.1 ID=mRNA_P-lacustris_contig1055.513.1|Name=mRNA_P-lacustris_contig1055.513.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1308bp|location=Sequence derived from alignment at P-lacustris_contig1055:35403..36710- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1055:35403..36710- >mRNA_P-lacustris_contig1055.513.1 ID=mRNA_P-lacustris_contig1055.513.1|Name=mRNA_P-lacustris_contig1055.513.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=882bp|location=Sequence derived from alignment at P-lacustris_contig1055:35403..36710- (Pleurocladia lacustris SAG_25_93)back to top |