prot_P-lacustris_contig1054.507.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1054.507.1
Unique Nameprot_P-lacustris_contig1054.507.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length142
Homology
BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: D7FNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW9_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 9.600e-22
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 MVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVSSSDETAVVEKLKVGLPHRVVDSKQLLPPSELSRVEGN 87
            MVLKCLFCS D Y+WKYGM++HV RCH+   L+A GT   R F++AYT+S S++  V++K K G P R     + LP   L   EGN
Sbjct:    1 MVLKCLFCSQDTYIWKYGMSEHVTRCHREDILVAAGTTVDR-FKEAYTISESEKAKVLQKFKAGRPRRRGQGNEALPTGALGSTEGN 86          
BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: A0A6H5K5R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.670e-18
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    1 MVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVSSSDETAVVEKLKVGLPHRVVDSKQLLPPSELSRVEGN 87
            MVLKC  CS +NY+WKYGM++HV R HQ    +A GT    +F++AY++S S++   + K K G P +     ++LPP  L R EGN
Sbjct:    1 MVLKCFVCSQNNYIWKYGMSEHVTRRHQEDMRVAAGTG-VDKFKEAYSISESEKAKALHKFKAGKPRQRGQGNEVLPPGALGRTEGN 86          
BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.740e-16
Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 MVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVSSSDETAVVEKLKVGLPHRVVDSKQLLPP 78
            MVLKC  CS DNY+W YGM DHV RCHQ + L+A GT  A +F++A T+S S++  V+ K+K G P R      L PP
Sbjct: 1151 MVLKCFLCSQDNYIWNYGMFDHVTRCHQANVLVAVGTG-ADKFKEACTISESEKAKVLHKVKAGRPRRRDQGNTLPPP 1227          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNW9_ECTSI9.600e-2250.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5R3_9PHAE2.670e-1844.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6M3_9PHAE1.740e-1651.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1054contigP-lacustris_contig1054:54287..54712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1054.507.1mRNA_P-lacustris_contig1054.507.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1054 53601..64205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1054.507.1 ID=prot_P-lacustris_contig1054.507.1|Name=mRNA_P-lacustris_contig1054.507.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=142bp
MVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVS
SSDETAVVEKLKVGLPHRVVDSKQLLPPSELSRVEGNGNDKEEKKKHSDS
DSDSNSDSDSDSDSDSDGGHGEEEHEEEEEKGFGENVARSL*
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