mRNA_P-lacustris_contig1054.507.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1054.507.1
Unique NamemRNA_P-lacustris_contig1054.507.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 3.630e-31
Identity = 73/145 (50.34%), Postives = 92/145 (63.45%), Query Frame = 1 
Query:  766 QASTTTVLCGFFGAFECRTTIIEKRGNRKSYVQFTRLSAPRKEAHGEAVSLNLKSAREGSRTSPCTNMVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVSSSDETAVVEKLKVGLPHRVVDSKQLLPP 1200
            + S  + +CGF G   CR+TI +  G  +  V  T  SAPR +A  EAV+LNL SAR  S TSPCTNMVLKC  CS DNY+W YGM DHV RCHQ + L+A GT  A +F++A T+S S++  V+ K+K G P R      L PP
Sbjct: 1084 KTSPVSTVCGFCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLSSARADSDTSPCTNMVLKCFLCSQDNYIWNYGMFDHVTRCHQANVLVAVGTG-ADKFKEACTISESEKAKVLHKVKAGRPRRRDQGNTLPPP 1227
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BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.450e-23
Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 1 
Query:  790 CGFFGAFECRTTIIEKRGNRKSYVQFTRLSAPRKEAHGEAVSLNLKSAREGSRTSPCTNMVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVSSSDE 1128
            CGF G     TTI +  G  +  V  T  SAPR +A  EAV+LNL SAR GS TS CTNMV KC FCS  NY+WKY M+DH+ RCHQ   L+A GT  A  F++  T+S S++
Sbjct:  415 CGFCGGVGRPTTIHDPPGKARPLVHSTCPSAPRSDARQEAVALNLSSARAGSDTSLCTNMVFKCFFCSQYNYIWKYSMSDHITRCHQADVLVAEGTG-ADNFKETCTISESEK 526
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BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 6.720e-20
Identity = 48/85 (56.47%), Postives = 56/85 (65.88%), Query Frame = 2 
Query:  395 SVLGCEYHVPLAKWDKSDPNRSTTCGAQQNQRVGSISIQNALDTQKERESSGDNVGYILARAVRSNLQYQAAIAIGRRGSGNQCK 649
            +  GC    P   WDKSDP+R TTCG QQ   +  +SIQ+ LD QKER+S GDNV Y+LAR VR  LQY AA  IG  G GNQC+
Sbjct:  108 AAKGCGCETPQPGWDKSDPDRITTCGRQQAHIIAGVSIQHVLDRQKERDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCR 192
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BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: D7FNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW9_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 9.920e-19
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 1 
Query:  967 MVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVSSSDETAVVEKLKVGLPHRVVDSKQLLPPSELSRVEGN 1227
            MVLKCLFCS D Y+WKYGM++HV RCH+   L+A GT   R F++AYT+S S++  V++K K G P R     + LP   L   EGN
Sbjct:    1 MVLKCLFCSQDTYIWKYGMSEHVTRCHREDILVAAGTTVDR-FKEAYTISESEKAKVLQKFKAGRPRRRGQGNEALPTGALGSTEGN 86
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BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.130e-15
Identity = 43/85 (50.59%), Postives = 51/85 (60.00%), Query Frame = 2 
Query:  395 SVLGCEYHVPLAKWDKSDPNRSTTCGAQQNQRVGSISIQNALDTQKERESSGDNVGYILARAVRSNLQYQAAIAIGRRGSGNQCK 649
            +  GC    PLA+W K D         QQ   +  +SIQ+ LD QK R+S GDNV Y+LAR VRSNLQY AA  IG  G GNQC+
Sbjct:   75 AAQGCGCQTPLAQWKKGDXXXXXXXXRQQAHIIAGVSIQHVLDRQKARDSEGDNVPYVLARTVRSNLQYLAAQEIGATGQGNQCR 159
[Close]
BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: A0A6H5K5R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.160e-15
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 1 
Query:  967 MVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVSSSDETAVVEKLKVGLPHRVVDSKQLLPPSELSRVEGN 1227
            MVLKC  CS +NY+WKYGM++HV R HQ    +A GT    +F++AY++S S++   + K K G P +     ++LPP  L R EGN
Sbjct:    1 MVLKCFVCSQNNYIWKYGMSEHVTRRHQEDMRVAAGTG-VDKFKEAYSISESEKAKALHKFKAGKPRQRGQGNEVLPPGALGRTEGN 86
[Close]
BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Match: A0A6H5K9U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U2_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.550e-8
Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 2 
Query:  395 SVLGCEYHVPLAKWDKSDPNRSTTCGAQQNQRVGSISIQNALDTQKERESSGDNVGYILARAVRS 589
            +  GC    P   WDKSDP+R TTCG QQ   +  +SIQ       ER+S GDNV Y+LAR VRS
Sbjct:  104 AAKGCGCETPQPGWDKSDPDRITTCGRQQAHIIAGVSIQ-------ERDSQGDNVSYVLARTVRS 161
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1054.507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5K6M3_9PHAE3.630e-3150.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L2E6_9PHAE3.450e-2352.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7P3_9PHAE6.720e-2056.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNW9_ECTSI9.920e-1950.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNQ5_ECTSI1.130e-1550.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5R3_9PHAE1.160e-1544.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9U2_9PHAE1.550e-850.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1054contigP-lacustris_contig1054:53601..64205 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size2078
Cds size426
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1054.507.1prot_P-lacustris_contig1054.507.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1054 54287..54712 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815324.647015-UTR-P-lacustris_contig1054:53600..542861622815324.647015-UTR-P-lacustris_contig1054:53600..54286Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 53601..54286 -
1693493477.0460315-UTR-P-lacustris_contig1054:53600..542861693493477.0460315-UTR-P-lacustris_contig1054:53600..54286Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 53601..54286 -
1622815324.6746905-UTR-P-lacustris_contig1054:54712..549191622815324.6746905-UTR-P-lacustris_contig1054:54712..54919Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 54713..54919 -
1693493477.0659912-UTR-P-lacustris_contig1054:54712..549191693493477.0659912-UTR-P-lacustris_contig1054:54712..54919Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 54713..54919 -
1622815324.6870975-UTR-P-lacustris_contig1054:55287..553931622815324.6870975-UTR-P-lacustris_contig1054:55287..55393Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 55288..55393 -
1693493477.076081-UTR-P-lacustris_contig1054:55287..553931693493477.076081-UTR-P-lacustris_contig1054:55287..55393Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 55288..55393 -
1622815324.6975605-UTR-P-lacustris_contig1054:59288..594301622815324.6975605-UTR-P-lacustris_contig1054:59288..59430Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 59289..59430 -
1693493477.0920546-UTR-P-lacustris_contig1054:59288..594301693493477.0920546-UTR-P-lacustris_contig1054:59288..59430Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 59289..59430 -
1622815324.7119405-UTR-P-lacustris_contig1054:63694..642051622815324.7119405-UTR-P-lacustris_contig1054:63694..64205Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 63695..64205 -
1693493477.100714-UTR-P-lacustris_contig1054:63694..642051693493477.100714-UTR-P-lacustris_contig1054:63694..64205Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1054 63695..64205 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815324.660034-CDS-P-lacustris_contig1054:54286..547121622815324.660034-CDS-P-lacustris_contig1054:54286..54712Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1054 54287..54712 -
1693493477.057333-CDS-P-lacustris_contig1054:54286..547121693493477.057333-CDS-P-lacustris_contig1054:54286..54712Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1054 54287..54712 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1054.507.1

>prot_P-lacustris_contig1054.507.1 ID=prot_P-lacustris_contig1054.507.1|Name=mRNA_P-lacustris_contig1054.507.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=142bp
MVLKCLFCSPDNYMWKYGMADHVNRCHQVSTLLAGGTAQAREFRKAYTVS
SSDETAVVEKLKVGLPHRVVDSKQLLPPSELSRVEGNGNDKEEKKKHSDS
DSDSNSDSDSDSDSDSDGGHGEEEHEEEEEKGFGENVARSL*
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mRNA from alignment at P-lacustris_contig1054:53601..64205-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1054.507.1 ID=mRNA_P-lacustris_contig1054.507.1|Name=mRNA_P-lacustris_contig1054.507.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10605bp|location=Sequence derived from alignment at P-lacustris_contig1054:53601..64205- (Pleurocladia lacustris SAG_25_93)
CACGATCTCACCTCCCACACATTACACGCTGCTGTGAGCGTCATGGCGGA
CGACGACGTGCCTGCGGCGAAGCGCACCAAGACAAGCGATGACGAGGTTG
ATGCCGTCGCAGACACGCCATGTACAGGCTGAACCCTTATTTTGCACCTT
CGCACAGGATGAATCTGTCATCTTGCTCCGATAAGTGGCCACCGAGGAAA
GCTTAGCGGCGGTGGATCACTGCGGTGGGTCCGCTCCTTATCAGACCCAT
TAGAGGATGAGTTCGACGACCAAGTGATCACAATTCTTAATGACCCACCT
ACTGCAGTTCGGACCTCAGAAACAACCGTGCGGTTGGGCTGTTGGAGAAG
GCTAGGACTGACCTTACAGCAGTGGATCATGGATGCACCGCAGGAGCGTG
CTGGGGTGTGAATATCATGTTCCCCTGGCCAAGTGGGACAAAAGTGATCC
AAACCGCAGCACCACTTGTGGTGCCCAGCAAAACCAAAGAGTGGGCAGCA
TCAGCATCCAGGTGAGCTTGCGCGGGATGTGCGTTTTCGTACCAATCCGC
AAAAAAATGAAATATATACTTGATTTCGCTACAACCCTTGAATAATGGAG
GAGCAATGTAGTTCTAGTCTTTTTTTTTTTTTTTTTTATGGGCCGTTTCT
TATAGAGACGGATTGTAACGAAAAAGGGCAAAATCCGTTTTCAGTTTTTT
TTACACCTGGGCTGACATGCTGTTTTTCTTATAGCAAACGGATTTTCAAG
TCAAAAAAAAAAAATTAGGGGCCATTGGCCCGAGGTCAGCTTCAAGCACA
AACAGCACACCGTCACCCTGGTTCTCGGCCCCTGGGTCGCCGATCGCAAC
CAAACCACTTCGAGCGTGTTATTCATTGTGATATCTGTGGATGTGGCAGT
TGTGGGGGGCATGGGTATTGTGTGTGGCGAGAGCTTGGAGGTGATGCAGA
AGTAATCCGTTTAGTTTTTTTTCTCCTTGCGCCTGTGGCCTGTGGCCAGC
AACAGCAACACAAGCAGCACACACCGTCACCCGGTTCTCGGCCTCTGGGG
CACCAATCGCAACCACACTACTTCGAGCGTGTGATCCATTGTGATATCTG
TGGGCATGGCAGTTGTGGGGAGCATGGGCATTGTGCGTCGCGAGAGCTTG
GTGGTGATGCCGAAGTAATCCGTTTAGTTTTGTTTTCGCCTGTTGCCTCT
GGCCTGTGAGCAGCAAAAGCAACGCAAACTGCACACACCGTCACCCGGTT
CTGGGCCTCTGGGGCACCGATCGCAACCAAACTACTCCGAGCGTGTGATC
CATTGTGATATATGTGGGCATGGCAAGTTGTGGGAGGCATGGGCATTGTG
TGTAGCGAGAGCTCGGTGGTGGTGTAGAGTCCGCGTTGTAGTTTTTGTTG
ATGAACCACGCAACCCGCGGTCAGAACAAGTAAGTGCGTTGCCTAGGCCA
CAGGTGACGCCCAGCAGGCCTACAAGCGCTGGCGCTAAAGCACGCACTGC
TGGGAGATAGACATACGTGTGCGTGTGTGTGTTTCAGTGGGTCGACCGCG
CTAACCGGCTGACAAATGACAATGTGCCCCGAGACTGTCGAACTTTTTCG
TTTCAAGAATCCGTGTGGGATCCGAGACGGATTCTGCCCTAGAATCCGTC
TCAACCTCGCACGGATTCTTGAAATCGTATTTTGCTGAAACGAAAAAGGC
ACAAATCCGACTTTATAAGAAACTGTTTCTGGCCCAAAAACGGATTTTGC
CCATTTTCGTTTCAAGAATCCGTCTCTATAAGAAACCGCCTTAAATGTTG
TCAACAAATCTTGAATTTAATCGAGAAGATTTGTGTGCGAACTTTCTCAA
CTCCAAGATTTGATACCGCTTTTTATTGAGAAGTAGACGGCGAGCGAAGC
GAGCCGGTATGTTTCGCACGATAGCGAGAAGCATAGCTTCGAATTCATAT
CGACATCGCGGGACTGTGGGTGTGTGTGAAAAAAACAAATCTTGCCACAG
GAAGGCAAATCTGATGAGGTTCTAATTGTTGGTGTGTTTCTGTCTGTGTT
TTTGTCTGTCCTCGCAAAAAATAGACCCACGTTTTGATTCACAACGCGAC
GAACTCGCCACACATCGGCGCAACCAAGGGCTTGAACTGATGATAAGCCT
TAGCTCGAGCTATTGCTGCTTGTTATCCTGCAACCCGTGCCGAAATGGGC
GAGCAAGGACGTCAAACGTGTGCATAGAGCGGAGTGCAGACATACGATAA
GTTGGTTCGCCAGGCATTTTTTCACACAGAGAGAGCAGAGAGAGCACAAA
GCGCACAGGAGAGAGAGAGGAGAGCTAGCTGTAGAGGACAGGCAGAGCAG
AGAGAGAGTATACAAAGCGCTGCTGATGCCGGGCCACCGAGGGGCTGTGT
AGGTATGTATTTCCAAGCAAGCGTACTTTTCAGGGCATAGTGGTGGTGCT
ATCAGGAGCATAGTAGTGCAGTTTGTAGCTCTACGGCAAAAAAGCGACAG
AGACCAGAAAAGCGACAGAGAGGGCCTTACCTGTGCTCCAAGCGTATGTA
TCCAGCAGCCCACACTGACTGCTGTAGAGCCACACACTACTACTCCTGAC
ACAGCACCACTCTGTCGTAAAGTACGCTTGGAGATACACCTACACAGCCC
CTCCGTTTGACTGCTATGTTTCGCTTTTTGGCTGCTGTGCTTTTTTTCAG
AGAGATGTTGACCAGCAGCCCCCACTGACTGCTGTAGAGCACACACACAC
TACTTACTACTCCTGTCCTGACAGCACCACTGTGCCCTGGTGTAGGATTA
GAGATACCTACACAGCCCTCCGTGGCCCGTCGGCACCACAGCCCATCCGT
GGCCCGTCGCCAGCAGCGCTGTGCACTCTGTCTGCTAAGTATTCTGCATT
TGACATTAGATGACCCGTTAGGCTTCTGTATTTGAGATGAAATGACCCCT
TGGGCTTTTGGATGTCAATCGATTTCATTTTTTTTTCCCAGCTCTCTCTC
TAGAGAGCCAGTTCGGCTATATGAATGGAGAAACAAAAAAGTTGGGAAGT
GCACCAAAGTCACAGCTAGCGATCCAGCTGCCGCCAGCACCACTGGTGTG
CCCGCAACATACGGCTTAACGCAGTTAGTTGAGGAGCACACAAGCGTTCA
CCCACTGACGTACACACGCTGCTTCTCAAACCTACCCGCCTTCTAGTATG
GGGAACAAACCTTGTTTCGGCGGATCTTGGATGTGACGTATGTATGTCTC
CTTGCACAGCTTGCTGTTCAAGTTGTTCAATCACTTCGTCCACAAAAACA
ACCACAGCGTCATCAAAACGGAACGCCACGCGACCACCAAAGCCTTCAAC
CCATCCCAGCTGTACAGCTTTAACGCTTCAGCAGCTGTATGTAGCGAACG
ACAGTCAGGGCGCGCAAAAAAAAAATGATGTTGGTCGCTGTTTTTCGCTC
GAAGGAGGAAAAAAGCATTTCCAATCGCAGCGGAACATCTCAAGCCGAGA
GCTACGACACCGATTCTCATTTCTCGTCTCGAAGTTAGCGCATCGAGGTC
AAACCTTCGACGTTGTTGACTGTACTCGGTGATCTCTTTCGTGTGCTAGT
GGGTTGGCTGTGGGTTGCTCAGATCAAGAGATGGAAGCGTTGCACACAAC
CGATCTGTTTTTGGGCGAAGTTTCCCCGGCTCGCTTTTACACTTGGAAAT
AGAGTATTTCCTTTTTTTGGCCTTCAACGGCTGACATGGACAGGTTGCGT
CGCAGCGATGCTGTTATCTCTCGATAGAATCGTCGCACAACCAAGCCACT
TGCATCCGAAAGAGAGCACTCAATGGGCATGACATCATTGAAGGTTTGAC
CTCGATACGTAACCTGCGGAGTGAGATACGTGAAACATTGTCGTTCGCTC
TCGGCTGGAGCGTTGTGGTTCTTGGTTGAAGAGCATACGTGTGCAGGTGC
GAGGCGAAAACGATTTTTTTGCGACCGCCTGCCTTGGGTTTTGCCGCCAT
CCGCACTCTCAGCGTCGAGAGCATGCCTCTAGGGTGGTTGTGAAACTTCT
ACGAGTTTGCCACGTTCAGATTCCATGGCGTAGTCGATGTTTTGGGTGAC
TGAAGTCTGCAGAGCCTACAAATCCCGCCGCTCTCTGCAAGATTTGTAGA
GCTGCTTCCATCTGCAAATTTTGGGCCAACATTTGCAGAAAAGGCAACTT
TCCGGCCTTCTGCAAGTCTTGGGTGCCAAATATTTCGAACGTTGGCGCCC
ATAAAAAGTGAAACAAAATCTTGGCGGACAAATCTTCCGAATTTCAAGAT
TATTGACAACATTTTGTTCCCATAAAGATCGGTGTTATCGAACCACTTTT
TTATACGAATTCGTATATTGGAAAAACGATTTCGTATATACCGAGGCGCG
AAAAAACTATTTCGGAGAATCAACAAGCAGACATGTTTCGTATATGATCC
TTACACGCAATCGTTTTTGATCATTTCCGAAAATCGTTTTCGTATGTGGA
GTATAATTTTATACGAATTCATATAAAAAGTGGTTCGATAAGAATGAGCC
TAATTCACTTGTTTCAGTGGTCGAGGTGGTCGTTCAGTTGTTGAATTGCG
TAGGTTTTTCGCGCCGCATGCGAGGTCTTTCTGCCGGACGAGCGCGGTGG
CCACAATATTCATCATGTAACAAAAGAAGTCGACAAAAAAAAAATGAACG
TAGTATAGCAAAACGTGTTTTTTTTTTGTCGGCCCCATTCCTCGTTTTCT
TGTAAACCGTCGCCGCCGACACCAGAATGCTCTCGACACGCAGAAGGAGA
GGGAAAGCTCTGGCGACAACGTCGGGTACATTCTTGCTCGCGCAGTGAGG
AGTAACCTCCAGTACCAGGCAGCGATTGCGATTGGGCGTAGGGGCAGTGG
CAACCAGTGCAAGCCCGGTGAGTCTTCGCCCGCGCAATGGAGATGTTCGC
TGGGAAGGGCATGAAAGGGGAACCTCGAGAGGTAGTCCTGGCACTGCTAC
GCCACTGAAACCGTAGACTTGCGGCTTGTTGGTCGCTAGTGCGATAGATT
GCGAGGTAGTCCCTCCGCGAGAGGAGGCAATCTATATACCTATAGCGTTT
GGCGAGTATCGTTGTGAGCGGCGTTACCGGCATCGGCTTCGTCTTGTTGC
CTCCTCGTTATTTAGACGTAGTGCGGGGGAACGAAATATTGGCAGCTCGG
ATGAAGTGCGGCTAACCGAAATATTGCCAATTCGAGCTAGGTGCGGCTTC
ATGAACACTTGGCAACGCTGTTTATGGGGTTGATAGTTGTGTCGGATTTC
CGGCACAGAGGGCGTTCTGCCATGATTACACATTGTCTGCCCTCGCAGGG
AAGAAATCCAGCGCATGGCACTGCTTCCCACCCAAAAAACGAATGAATGT
CGAAGCTTCGCCCCTCCCCTTGAGTCGGCTAGTAGTTTAGGCCGGCTAGT
AGAGGTGACACAAACTCCAAACCGAAAGGATAATCAATTGTTCACCCCCA
CCCCACCCCGAACCCAGTCGCTTGCCGCCATCATGAAAATCCCCCGAGAA
GCATGAGGTCACCCCGATCCCCGCTGAAGACAATAAATCAGTTGTCCCCA
AGCAACCCCCTCCATGCTCGGCCGCTGCCGAAACCATACGACTCAATTTC
GCGCCTGCTCGTGAAATGCCACACCCATGATACCACCCCCGTGGCACACA
CACACTCACACTCCCTCTCCGCCACCCAATCAAAGGAGTTAGCACCCTAG
CGACCCCCTATCTACGCTGGACGGGGCGTTCTCTTGATCGCTGTCGCCGC
TGGACCCGCCATTCTCCTGTTCCGCATCCAAAACTTTCCGTGGGGTTCTG
TGCCTCGTTCTGCTCGGAGACACCACGGCTCCGGTAGTTGCCGTCGAAGC
CTCGCTTGAGGCATGCGCCGACGACATCTCGGGTGGGTCGCCCTTTCTGC
TCTTGGTCGTGCTCGTCTCGCTCTCGGCCTAGCTCGATCTCTTGATGATG
CTGGTGGGACCGCTTATCGACTCAGCCGCGGGCTCGGCATTTTTCTTCCC
CCCCTCCCTACCGCCCTCCCAACCGCTCCTTGATGCCGTCGCACCACGTG
GCCCCGGTGGTGTCGAAGGCTTGCCCGCTCCCTCCCGTTTCTTGGCCGCT
GCAAAATACTTGGCCGGTGCGGCCCGACCGTGATATTCTGCCGACAGCCA
GAAAGAAGGGATCCCCTCGCTTTCACATGCCTTGCGGGTAGTCTTCTTCC
GCTGAATTTTCGCCGCCGCGGGTTCTGTAGAAAGTGCCACCACAGACTCC
ATTGTGTTTTTTTCGCGGCTGCTGCCGGCGCGGTCGTATGCTACGACAAC
TGCGCCCCCCCATCCCTCTACACTGTCCGTGTCCCCGCTAGGTGCACCAC
CCCCCTGCGGCTCCAAATACTTTTTCCCGGGCGCTTCTCTGCTAAGTTCG
TTGGCGCGGTTCATCAATTGGCCGTTGTTCGTGGTTACCCGGAACGCCGC
GGACCTCCTCGTGAGCTTAGCGATGTTGTCCCGAACGACTCTGTCCTCAG
GGTAGGTTGTTTCGCCGGCGTTCACGTGGGCCGCCCTTCGCAGCTGACGG
AGGGCTGCATCCTGCGCCTGCTGCGTCAGCGGTAGCAGGTTACAGCGTTG
CCGCAGGCGGTTAGGGGTATCGACCAGGATAGCACCGTTTCAAGAGGGCA
TGCTGGGCGCGGCCGACGTGACGGACGTAGAACTCGCTCCGCTTGGACAC
GATTGCAGCGATGCTCCTGTTGTAGCTCTCGAGGGCGTTCGTCCCTAGCT
TGACGCAAAAGCAGAACGCCCGTAACAGCGCGTTGTTGACGACCACCTGT
GCCGCGCAAGCCGAACACTTGCGCTTCGTCGTCGAGTTGAGTCCGGACCC
GTTAGCACAGGTGGAGAAGAAGACCGTAGGACTAGCCTCCCGTTATGATA
AGTGGCGCAAGGTGCCGCTGCGAAAAGTACGTAGCAAGTGGTGGGCAAAG
AAACGGGGACTGAGTTAGTTGCTTGAGGCATAGTTGATAGTCGGGACGAC
TCGCCTATATCTTCGAACAGTGACCCCGATATAGAATACCCCCACTCATA
GAAGCAGACGACCAAGTACCCTACATACTTTCGAAGAAAATGGACACACT
TCACACGCACGGACCACACACACCGCACGTGCATGCACGACCCTAGCCGT
TGTAATGAAGAACAGCGTGGCTTTACACCCTACCTCCGGCAGTATTTTGA
CCCAACAGCCTCTACGAGTCCCTACAGGTGCCGGAGGCAAGTTTGTGCTT
GAGATTGTGGGACTCACGTGTTGGCTTGCCTTTGGTATTCAGATGCCAAC
ATGATCCGTATTTTTGAGATTGTGGGACTCACGTGTTGGCTTGCCTTTGG
TATTCAGATGCCAACATGATCCGTATTTTCGTCGCTGCGAAAAAAACGTC
CTTCTCAGCGAGAGCCACCTGGTCGACTACCTCCACGCACTCCTGTTGCA
AAAGGGGTGGTGAAAACGTTTAGGGCTTTTGGTTGCAACACAAAAGCAAA
CGGAGGCAATCGCTTCCTATGACATCCTGGGTAAGGGGGCAATAAATTTC
TTACATGCCTGGGGAAGGGAGCAAGAATCTTTCAGTTACATCCTAGGGAA
GGGAGCGATAATCCCTTATGATCTACAGCTAAAACATGAGCGGCAGAGGA
ACTGTTCTGTGTCACCCGTGTCGAAGCCGTAGAGCTAAAGAAGAGGCGAG
GCATCCTGTAACAGAATGGGAGTCATCTTCACTGCCGTTGCAAATGAACG
CGTCATGGAAGTAGTGACACAGACGCGAATGGATTGGAAGTTAAAACCAA
ACAAAGACCACATCAATAGCTAACAACACTGGCACCCTGCAGGGCAGTAT
GAACATCACGGCAAACGCGTCCTGTGCGGGGTGGGGTTGCACTACGGGTC
GTTGATCGGGGCCAAAAACATGGCGCCTACATGTACGCCTGCACCTTTGT
CGTGAGGATCCGAGAAGCGGGGCCGCGTACCATCCTCAGCCTCCCCGCTC
CCGGGCTTCCCTGCTACGCTCCGCCGTCGGGGGATATAGCCATTCCACCT
AGGTCCTCCTGCAGCTTAATTTATGCCGTCGGCATGGCGAAAAGGGCGAC
AACAAAAACGCCATTTATTTCCTGGTGCCGGATGAGGGCGTGTTCGCTGT
TCGTCTGGACACTCCGGCATGTATTTTACGCCTAACAACGTGTCCTATAC
AACCTAGACACTGGAAACACTTTCTTTCAGGAGACACGGCAGAGGGGAGC
GGAGAGAAAAAACAAACACAAAAAATTAGGAGTTGACCCACTTGCAGTTC
AAGACCACCGAACAGTTTGGCACGGAGGAGGAATGGGAGGTTGCAGAGTC
ATCTGTGATATTCAAACACTGTTTGTCAGGAAGATAGGAAGCGTTCCGGA
GAGTAAAAGACATTCAGGCCGTGTATTAACGATGTTCAAAAAGTTGAAAT
CAAAACTAAAATTGAGGAGACGTTACCCAAAAAACACCCCAAAAACCATA
ATTGTATCGATGTTAACGGGAGAGGACTAGTTGAGGCTGCTCGGCGTGAT
AACGCTCGAAGCTAATACGAACCTTCCCGTGGTCATCTCAGAGAGCGTGG
TTGAAGCTCGGAACTTTCAAGGTGTTCTTGTGCCCTCATCAGGTCTGTCT
GCGCTTGGCTGTCTACTTCTCTACACACTCGGTTCAGTGTCATGTGCATC
GTATCGCGCGAACCTAAGAACGAACATGTGACCCCTCCCCCTCGGCACGT
TGCCTGTTGCAGACATCGTCGAGCGAGCCGGCTGCTCCGTATCGAGCACT
TCTTGGAAACCTTCCCCGATCCGAAATTAGACAACACGTTGGAGGGCACA
TTTTGAACGACAAGGCGCGTGAGTTGTTCAGTGTTTGGTCCTGGGATGGC
GGTTGGTTGGTTGTTCGTGTGTTGTGTTCAAGCTGGACCGTAGCACCAGA
TCACGATCCTGTTTGGGCGTCCTGTGCTTTTCCCACCCCCGTTTATTATA
GACGGTAGCCTTTCATTGACACCTTGCGGAAATTATGTTTGCATGTACGA
AATCGCTGTCGTTCCTTGGTGTGTTGTTTGCCTCACGTTGAGTGGCCCGC
TTTATGACCACTACTGTCGACCCCGTCTACCCGTCCACCCGTGTGTACAG
TACAATTCGGTGTGACGTATCAATCTAGCATAGGCTGACATCCGTACCCT
CGCCAACCTTGCATATTTTCTCTCGTCTCATTCCAGGCTCTGCAGGCGAG
CACTACTACTGTGTTGTGTGGATTCTTCGGTGCCTTTGAATGCCGTACCA
CCATCATCGAAAAACGCGGCAATCGCAAATCCTATGTGCAGTTTACCCGT
CTATCGGCCCCTCGGAAGGAGGCACACGGCGAGGCAGTCTCTCTCAACCT
GAAGAGCGCGAGGGAAGGCTCACGTACCTCACCTTGCACCAACATGGTCT
TGAAATGCTTGTTCTGCTCTCCGGACAACTACATGTGGAAGTATGGTATG
GCCGACCACGTCAACAGATGCCACCAGGTTTCTACACTACTGGCAGGAGG
TACTGCACAGGCAAGAGAGTTCAGGAAGGCCTACACTGTTTCATCGAGCG
ATGAGACGGCGGTGGTCGAGAAGCTCAAGGTTGGGCTTCCTCACCGAGTT
GTCGATAGCAAGCAGCTCCTTCCGCCGAGTGAACTTTCGCGTGTCGAAGG
GAACGGCAACGACAAGGAGGAGAAGAAGAAACACTCCGACTCCGACTCCG
ACTCCAACTCGGACTCCGACTCCGACTCCGACTCCGACTCCGACGGTGGC
CACGGGGAAGAGGAGCACGAAGAGGAAGAGGAAAAGGGCTTTGGGGAAAA
CGTAGCAAGAAGCCTGTAGCCAGTGGTTCGCACGAGCAAGGGGGCTAGAA
CCCTCACTACGAATTGTCGCCTAATTGACCTTGAGGTTTAGACTTTATTT
TTTGTGAGCTGATATTATCCGCTGCGTTGTAAATATTAGGAGACGTTTGG
GGCACGTGCCGCCTGTCGAGAATCTCGAAACCTCAAAGGCGTAAGGGAGT
CTAACAGTCTAACAGTATGTTAACAGCAGTGTCAATACGCCGGAAAGTCC
CGGATTTTTGTTTGATTTATTGGTTCTTGTTTTACGTGCATGCACGCTGG
CATGCGCGTGGCCCCGGCCAGCCAATCAAGCGGATGAATGAGGGCATGAT
CTTGACAACTACAATGCGAAGCGATTTCAACCAGACCACCACGGCAAGCA
AAGCCGCGGTAGGTGGGTCAGTAGTCGTCGTGGACAAATAATGCTGCAGC
TTGATACAAACAGGCATGATCAGCTGGTGCAATTTCCGTGTACGAGCATC
GGAGATGTGGCACCTGATTACAAATTGTACACGTTTTTTCATTTTTCGTG
TCAATGTGAGCCCTTTCATGAGGTAAAGGGAATAGAGCTCGGTGCGTATA
CTTGTAGTCAGGGGAAAAGCTGAAGATTGGGCCAACAGGCGGCCGAACGA
CTCAAAACTCCTCGAAATCTTTGTTGTTTTCCGTGCGTCAAGGTGTCTTT
CATCA
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Coding sequence (CDS) from alignment at P-lacustris_contig1054:53601..64205-

>mRNA_P-lacustris_contig1054.507.1 ID=mRNA_P-lacustris_contig1054.507.1|Name=mRNA_P-lacustris_contig1054.507.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=852bp|location=Sequence derived from alignment at P-lacustris_contig1054:53601..64205- (Pleurocladia lacustris SAG_25_93)
ATGGTCTTGAAATGCTTGTTCTGCTCTCCGGACAACTACATGTGGAAGTA
TGGTATGGCCGACCACGTCAACAGATGCCACCAGGTTTCTACACTACTGG
CAGGAGGTACTGCACAGGCAAGAGAGTTCAGGAAGGCCTACACTGTTTCA
TCGAGCGATGAGACGGCGGTGGTCGAGAAGCTCAAGGTTGGGCTTCCTCA
CCGAGTTGTCGATAGCAAGCAGCTCCTTCCGCCGAGTGAACTTTCGCGTG
TCGAAGGGAACGGCAACGACAAGGAGGAGAAGAAGAAACACTCCGACTCC
GACTCCGACTCCAACTCGGACTCCGACTCCGACTCCGACTCCGACTCCGA
CGGTGGCCACGGGGAAGAGGAGCACGAAGAGGAAGAGGAAAAGGGCTTTG
GGGAAAACGTAGCAAGAAGCCTGTAGATGGTCTTGAAATGCTTGTTCTGC
TCTCCGGACAACTACATGTGGAAGTATGGTATGGCCGACCACGTCAACAG
ATGCCACCAGGTTTCTACACTACTGGCAGGAGGTACTGCACAGGCAAGAG
AGTTCAGGAAGGCCTACACTGTTTCATCGAGCGATGAGACGGCGGTGGTC
GAGAAGCTCAAGGTTGGGCTTCCTCACCGAGTTGTCGATAGCAAGCAGCT
CCTTCCGCCGAGTGAACTTTCGCGTGTCGAAGGGAACGGCAACGACAAGG
AGGAGAAGAAGAAACACTCCGACTCCGACTCCGACTCCAACTCGGACTCC
GACTCCGACTCCGACTCCGACTCCGACGGTGGCCACGGGGAAGAGGAGCA
CGAAGAGGAAGAGGAAAAGGGCTTTGGGGAAAACGTAGCAAGAAGCCTGT
AG
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