prot_P-lacustris_contig1036.379.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1036.379.1
Unique Nameprot_P-lacustris_contig1036.379.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length272
Homology
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BLAST of mRNA_P-lacustris_contig1036.379.1 vs. uniprot
Match: A0A6H5JM15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM15_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 2.090e-61
Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0 
Query:    6 GSTTARREVSEWLKAQTDDAGDG-VGRIEIDHVKEEERRIVLKEASRGQVFSITYQKEYPNSADEYLFLETDSKVADFVAVINDLRDFLYGQPTSLTLTCLLDQLKRFLQKKSAKKSKGALGA-PSTATSG 134
            GSTTARREVSEWLK+QT +AGDG VGRIEIDHVKEEERRIVLKEASR QVFSITYQKEYPNS DEYLFLETDSKVADFVAVINDLRD++YGQPTSLTLT LLDQLK    KKSAKK  GALGA PS+A  G
Sbjct:    3 GSTTARREVSEWLKSQTTEAGDGGVGRIEIDHVKEEERRIVLKEASRAQVFSITYQKEYPNSVDEYLFLETDSKVADFVAVINDLRDYVYGQPTSLTLTALLDQLK----KKSAKKGMGALGAAPSSAALG 129
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BLAST of mRNA_P-lacustris_contig1036.379.1 vs. uniprot
Match: D7FMN8_ECTSI (Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN8_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.450e-29
Identity = 83/131 (63.36%), Postives = 84/131 (64.12%), Query Frame = 0 
Query:    6 GSTTARREVSEWLKAQTDDAGDG-VGRIEIDHVKEEERRIVLKEASRGQVFSITYQKEYPNSADEYLFLETDSKVADFVAVINDLRDFLYGQPTSLTLTCLLDQLKRFLQKKSAKKSKGALGA-PSTATSG 134
            GSTTARREVSEWLKAQT  AGDG VGRIEIDHVKEEERRIVLKEAS GQVFSITYQKEYPNSADEYL                                       RFLQKKSAKK KGALGA PS+A  G
Sbjct:    3 GSTTARREVSEWLKAQTVGAGDGGVGRIEIDHVKEEERRIVLKEASGGQVFSITYQKEYPNSADEYL---------------------------------------RFLQKKSAKKGKGALGATPSSAALG 94
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1036.379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JM15_9PHAE2.090e-6185.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMN8_ECTSI1.450e-2963.36Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1036contigP-lacustris_contig1036:49710..58526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1036.379.1mRNA_P-lacustris_contig1036.379.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1036 49710..59087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1036.379.1 ID=prot_P-lacustris_contig1036.379.1|Name=mRNA_P-lacustris_contig1036.379.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=272bp
MSGSTGSTTARREVSEWLKAQTDDAGDGVGRIEIDHVKEEERRIVLKEAS
RGQVFSITYQKEYPNSADEYLFLETDSKVADFVAVINDLRDFLYGQPTSL
TLTCLLDQLKRFLQKKSAKKSKGALGAPSTATSGDREEGLQGDTGAGGEG
IGGIGVMAEVRVATETEVTITVERMERRARRARRRKETNPTTFVSELFFC
RQLRRRRGRRGGRRGGGSGRRAEGVNVVGRALQKEELAGVKRRCERRWRR
TRRGRPSRRRTPARRGSSPRRR
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