prot_P-lacustris_contig1035.376.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1035.376.1
Unique Nameprot_P-lacustris_contig1035.376.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length103
Homology
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: D7FV03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV03_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.080e-27
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 0
Query:   21 QVRRLANQALVDLFNALGGSRWRNKTGWLTSGTE---WHGVTVNAGSLVSLNLISNDLE 76
            Q+RRLANQALVD+FNALGG RWRNK+GWLT GT+   WHGVTVNAGSLVSLNL+SNDLE
Sbjct:   12 QIRRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKKWHGVTVNAGSLVSLNLMSNDLE 70          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: D8LJ86_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ86_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.030e-12
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 0
Query:   17 PPSGQVRRLANQALVDLFNALGGSRWRNKTGWLTSGT---EWHGVTVN-AGSLVSLNLISNDLE 76
            P S   RR+ANQ L DL++ LGG  W+ + GWL  G+   EWHG+T+  +G LVS+NLISNDLE
Sbjct:   27 PSSSTQRRMANQGLQDLYDWLGGDNWKCRDGWLDPGSDVREWHGLTITTSGDLVSINLISNDLE 90          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: D8LFJ9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ9_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 1.190e-6
Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 0
Query:   15 PRPPSGQVRRLANQALVDLFNALGGSRWRNKTGWLTSG--TEWHGVTVNA-GSLVSLNLISNDLE 76
            PRPP   + +   +ALV L+ A+GG++WRN   W TS   ++WHGV VN+ G +V+L L  N+L+
Sbjct:   19 PRPPY-TMAQTDREALVALYTAIGGAKWRNNRNWNTSAALSQWHGVEVNSQGRVVNLFLWDNNLQ 82          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: A0A401FQW3_9DELT (Uncharacterized protein n=2 Tax=Desulfonema ishimotonii TaxID=45657 RepID=A0A401FQW3_9DELT)

HSP 1 Score: 52.0 bits (123), Expect = 1.750e-5
Identity = 24/50 (48.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:   28 QALVDLFNALGGSRWRNKTGWLTSGT--EWHGVTVNAGSLVSLNLISNDL 75
            +ALV L+N+  G  W NK GWLT      WHGVTV  G +V + L +N L
Sbjct:  913 EALVALYNSTDGDNWTNKDGWLTDPVAGNWHGVTVQGGHVVEIELKNNKL 962          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: A0A5S3PPH3_9FLAO (Uncharacterized protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PPH3_9FLAO)

HSP 1 Score: 51.6 bits (122), Expect = 2.030e-5
Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = 0
Query:   20 GQVRRLANQALVDLFNALGGSRWRNKTGWLTSGTEWHGVTVNAGSLVSLNLISNDL 75
            GQ+    + AL++L++   G  W NK       +EW+G+TVN G++VS+NL +N+L
Sbjct:   29 GQITNNEHIALLELYDNTNGKEWTNKWDLEKPVSEWYGITVNEGNVVSINLFNNNL 84          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: A0A329RHR8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RHR8_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 2.060e-5
Identity = 23/53 (43.40%), Postives = 32/53 (60.38%), Query Frame = 0
Query:   29 ALVDLFNALGGSRWRNKTGW---LTSGTEWHGVTVNAGSLVSLNLISNDLECC 78
            ALV+L++AL G RWR + GW        +W GV V  G +V+L L +N+L  C
Sbjct:   15 ALVELYDALNGDRWRRRDGWKQPTRDPEQWFGVEVAMGHVVALELPANELSGC 67          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: A0A3M6VBB7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBB7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.010e-5
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0
Query:   29 ALVDLFNALGGSRWRNKTGWLTSG---TEWHGVTVNAGSLVSLNLISNDLECC 78
            ALV+L++AL G RWR + GW  +     +W GV V+ G +V+L L +NDL  C
Sbjct:   15 ALVELYDALNGDRWRRRDGWKQTTHDPEQWFGVEVSMGHVVALELRANDLSGC 67          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: G4YS16_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YS16_PHYSP)

HSP 1 Score: 50.8 bits (120), Expect = 4.110e-5
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   29 ALVDLFNALGGSRWRNKTGW---LTSGTEWHGVTVNAGSLVSLNLISNDLECC 78
            ALV+L++ALGG RWR + GW        +W GV V  G +V+L L +N+L  C
Sbjct:   15 ALVELYDALGGDRWRRRDGWKQPTRDPEQWFGVEVAMGHVVALELPANELSGC 67          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: A0A3F2RJP5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJP5_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.320e-5
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   29 ALVDLFNALGGSRWRNKTGW---LTSGTEWHGVTVNAGSLVSLNLISNDLECC 78
            ALV++++ALGG RWR + GW        +W GV V  G +V+L L +N+L  C
Sbjct:  243 ALVEIYDALGGDRWRRRDGWKQPTQDPEQWFGVEVTMGHVVALELPANELSGC 295          
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Match: H3GFP3_PHYRM (Crinkler domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFP3_PHYRM)

HSP 1 Score: 50.8 bits (120), Expect = 4.410e-5
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   29 ALVDLFNALGGSRWRNKTGW---LTSGTEWHGVTVNAGSLVSLNLISNDLECC 78
            ALV+L++ALGG RWR + GW        +W GV V  G +V+L L +N+L  C
Sbjct:   15 ALVELYDALGGDRWRRRDGWKQPTRDPEQWFGVEVAMGHVVALELPANELSGC 67          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1035.376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FV03_ECTSI3.080e-2783.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJ86_ECTSI1.030e-1254.69Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
D8LFJ9_ECTSI1.190e-644.62Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A401FQW3_9DELT1.750e-548.00Uncharacterized protein n=2 Tax=Desulfonema ishimo... [more]
A0A5S3PPH3_9FLAO2.030e-539.29Uncharacterized protein n=1 Tax=Maribacter algarum... [more]
A0A329RHR8_9STRA2.060e-543.40Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A3M6VBB7_9STRA3.010e-545.28Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
G4YS16_PHYSP4.110e-545.28Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A3F2RJP5_9STRA4.320e-543.40Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
H3GFP3_PHYRM4.410e-545.28Crinkler domain-containing protein n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 26..101
e-value: 5.2E-8
score: 33.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1035contigP-lacustris_contig1035:23680..27119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1035.376.1mRNA_P-lacustris_contig1035.376.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1035 23113..27269 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1035.376.1 ID=prot_P-lacustris_contig1035.376.1|Name=mRNA_P-lacustris_contig1035.376.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=103bp
MTTVDNHDNSVLPSPRPPSGQVRRLANQALVDLFNALGGSRWRNKTGWLT
SGTEWHGVTVNAGSLVSLNLISNDLECCSRRNSTSLELDHQAAVGRSIQK
SS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf