prot_P-lacustris_contig1030.356.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1030.356.1
Unique Nameprot_P-lacustris_contig1030.356.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length608
Homology
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BLAST of mRNA_P-lacustris_contig1030.356.1 vs. uniprot
Match: D8LFA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA6_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 2.240e-28
Identity = 95/171 (55.56%), Postives = 107/171 (62.57%), Query Frame = 0 
Query:  165 LQVQMAGLQEKSLASRLAYERLHADKLASD--VVSAEEQQRLLAKEAADAKNKSAVAEEARRTAESRVSTLEGRLLNLRKEDERASSAEAGAADAAARTARSKADQVDVLRKKVARMEASVQAEKTSREEVEQGLSRALSAKGKLERFLEGVLKVNEELVKVKALGGGDAG 333
            +QVQMAGLQEKSLASRLAYERL ADK ASD  +  AEEQ+R LA+E A AK+KS                         KE+E++SSAEA A     RT RSKADQ DVLR+KVAR+EASV+         EQGL RALSAK KLERFLEGVLK +  L      G G AG
Sbjct:    1 MQVQMAGLQEKSLASRLAYERLQADKAASDLRIRKAEEQKRQLARETASAKDKSXXXXXXXXXXXXXXXXXXXXXXXXGKEEEKSSSAEAKAXXXXXRTXRSKADQADVLREKVARVEASVRXXXXXXXXXEQGLERALSAKVKLERFLEGVLKESSNL------GTGHAG 165
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BLAST of mRNA_P-lacustris_contig1030.356.1 vs. uniprot
Match: A0A7R9YA16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA16_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 8.570e-13
Identity = 77/216 (35.65%), Postives = 126/216 (58.33%), Query Frame = 0 
Query:  116 SAGSKAVLSALRALQDKIRKLESERDRASVEAGTLRRQIAALQTENGRTLQVQMAGLQEKSLASRLAYERLHADKLASDV--VSAEEQQRLLAKEAADAKNKSAVAEEARRTAESRVSTLEGRLLNLRKEDERASSAEAGAADAAARTARSKADQVDV-LRKKVARMEASVQAEKTSREEVEQGLSRALSAKGKLERFLEGVLKVNEELVKVKALG 328
            S+GS+AVLSALRALQDKI++LE ER +A  E   L++Q+   +    R+ +++     E+  ASRLA ER+ A+K   ++    AEE +  L KE    +  ++ +E ARRTA+  +S ++G +  L  E +   +  A A +  A+  R + DQ ++ L   + ++E  ++ EKT R E       A++ K +L+ FL+GV+ +NE+LV+  A G
Sbjct:  225 SSGSRAVLSALRALQDKIKRLEGERSKALDEVNALKQQLEEAEASAKRSRELEKLTNSEQVHASRLANERVTAEKKVVEMRLSKAEEHKASLRKEIDALRKAASESEIARRTADGNLSVVQGHVRELEGELDDMKAQLAVAHEELAKE-RDERDQREIELGVVIQKIEEQLREEKTMRCE-------AVTEKERLDEFLKGVVAINEDLVRSIAKG 432
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1030.356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFA6_ECTSI2.240e-2855.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YA16_9STRA8.570e-1335.65Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 195..243
NoneNo IPR availableCOILSCoilCoilcoord: 119..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1030contigP-lacustris_contig1030:43440..54154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1030.356.1mRNA_P-lacustris_contig1030.356.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1030 41160..55805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1030.356.1 ID=prot_P-lacustris_contig1030.356.1|Name=mRNA_P-lacustris_contig1030.356.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=608bp
MGGGASAHVGSGGRDEARGSPRGASSWRTEADADLSDIKATMRRIDDAGA
ASTATAGVAFSLDRGSMGEFAATTPFPVGAAAAGGPGREETVLLVCRGGG
DEPARRSAAPPGWGASAGSKAVLSALRALQDKIRKLESERDRASVEAGTL
RRQIAALQTENGRTLQVQMAGLQEKSLASRLAYERLHADKLASDVVSAEE
QQRLLAKEAADAKNKSAVAEEARRTAESRVSTLEGRLLNLRKEDERASSA
EAGAADAAARTARSKADQVDVLRKKVARMEASVQAEKTSREEVEQGLSRA
LSAKGKLERFLEGVLKVNEELVKVKALGGGDAGAHEIGNRNKTQQKKKQR
PKAAAGAPAGVGCKGRGSMGELYTEVGHAVLNSTNEVPSMFRERERRRRQ
QKSSGSKVGVRAGGARVGEGGAFLDVALPGGLSSAGSMVSSGSERERESG
EDRDKNGYANDEGEGDHDSGDDDGDDDTSASRERWRREWNRATAKTSVER
EDLEDDDARGLVTAAREERKERRAGGTGGSISARYMQYGFDTIGRGAGRR
RRTMTRRKAGTWGPRKGSLNRWRRRRRREEGMRTKRSRKRGGRRDTAWRQ
AASKVWT*
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