prot_P-lacustris_contig103.346.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig103.346.1
Unique Nameprot_P-lacustris_contig103.346.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length403
Homology
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: D8LIR0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR0_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 1.470e-123
Identity = 198/232 (85.34%), Postives = 209/232 (90.09%), Query Frame = 0
Query:  172 GEEGIEASPAHREKPEGSKIARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERMKSELAAAGLTKLPARKSSSEAVEGGPTSLVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLRDEFREERSSVKKKQHKPEAGGAKAAGVKKAGVAA-PKRGRSITSFFQKA 402
            GE G+ ASP   EKP+GSKIARARSAWMLFLADNR+ VR EHPGLAVGPMQKILSEMWK LGE EVARYAKLAAEDKER+K+ELAAAGLTKLP + SSS AV GGPTSLVLPLARVRKTVRLDPSVGNISKEGL+L+TKATEVFMA LADHAW IGRQTGRKSVRPCDVADFVFAAPEMYWL+DEFREERSSVKKKQ +PEAGGAKAAG  KAGV A PK  + ITSFFQKA
Sbjct:  162 GEAGVAASPPSGEKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKALGEAEVARYAKLAAEDKERVKNELAAAGLTKLPTKNSSSAAVAGGPTSLVLPLARVRKTVRLDPSVGNISKEGLLLVTKATEVFMAVLADHAWNIGRQTGRKSVRPCDVADFVFAAPEMYWLKDEFREERSSVKKKQSRPEAGGAKAAGATKAGVTAVPKGAKPITSFFQKA 393          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: A0A6H5K256_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K256_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 4.360e-24
Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0
Query:  178 ASPAHREKPEGSKIARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAED 247
            ASP   EKP+ SKIARARSAWMLFLADNR+ VR EHPGLAVGPMQKILSEMWK LGE EVARYAK+ + D
Sbjct:  175 ASPPSGEKPDESKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKGLGEAEVARYAKVRSLD 244          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: A0A1V9ZFH9_9STRA (HMG box domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFH9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.050e-23
Identity = 80/221 (36.20%), Postives = 123/221 (55.66%), Query Frame = 0
Query:  188 GSKIARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERM---KSELAAAGLTKLPARKS-SSEAVEGGPTSLVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLRDEFRE--ERSSVKKKQHKPEAGGAKAAGVKKAGVAAPKRGRSITSFFQKA 402
            G  +++ +SA+  FLA  R +V+A++PG A+G +QKIL   WK L  EE   Y +LA +DKER    K+EL A G+   P + + +SE V      L LP ARV++ +  D  V  +SK+ L+ +TKATE+F+  LA   +     + RK+++  D+   +     + WLRD+F +   RS+V+ K        AK +   +    AP    SI+SFFQ+A
Sbjct:   58 GPLVSKPQSAYFHFLAAKRGEVKADNPGAAIGAIQKILGTKWKELTSEEKEPYIQLALDDKERYAKEKAELLARGIDIEPEKTTVASEDV------LSLPCARVKRIINADQDVSKVSKDALIAITKATELFIKYLAAKGYDSAMISKRKTIKDSDLIQVIHGHGALDWLRDDFPQTSSRSAVEPKA-------AKVSSRTEPSGNAP----SISSFFQRA 261          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: A0A1V9ZYX4_9STRA (HMG box domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYX4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 8.250e-23
Identity = 68/187 (36.36%), Postives = 105/187 (56.15%), Query Frame = 0
Query:  176 IEASPAHRE-KPEGSKIARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERM---KSELAAAGLTKLPARKS-SSEAVEGGPTSLVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLRDEF 357
            I   P+  E K + + +A+ +SA+  FLAD R +V+AE+P   +G +QKIL  +WK L  E+   Y + A  DKER    K  L   G+   P +   +SE +      L+LPLARV++ ++ DP VG ISK+ L+++TKATE F+  LA         + RK+++  D+   +     + WLRD+F
Sbjct:   32 IPVDPSQEETKDDDTNVAKPQSAYFHFLADKRPQVKAENPNATIGALQKILGTLWKELSAEDKEPYIQKALLDKERYAKAKERLLERGIDIEPEKPEVASEDI------LLLPLARVKRIIQADPDVGKISKDALIVITKATEQFIQYLAAKGQDSAMISKRKTIKDSDLLQVIHGHGSLDWLRDDF 212          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: W4H0Q5_9STRA (HMG box domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0Q5_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.290e-21
Identity = 74/217 (34.10%), Postives = 112/217 (51.61%), Query Frame = 0
Query:  189 SKIARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERM---KSELAAAGLTKLPARKSSSEAVEGGPTSLVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLRDEFREERS-SVKKKQHKPEAGGAKAAGVKKAGVAAPKRGRSITSFFQK 401
            +K+A+  SA+  FLA NR  V AE+PGL +GP+QKILS  W  L  E    +  +AA DKER    K  L   G+      +++        + L LP ARV++ +  DP V  +SK+ ++ +TKATE+F+  LA         + RK+V+  DV   + +   + WLRD+F E +   V  K  K  A  +  A  + +  ++      ITSFF +
Sbjct:   67 TKLAKPLSAYFHFLAANRAIVVAENPGLGIGPVQKILSTKWNELSAEAKEPFTTMAAADKERYLNDKQSLMDQGID----IEAAPRVPRNDESLLTLPSARVKRIMLTDPDVNKLSKDSVLAVTKATELFIHFLATKGHDSATISKRKTVKDSDVLTAIHSHAVLDWLRDDFPESKKVPVAAKLSKKSAAHSNVAATEASPSSSSSAKSKITSFFSR 279          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: A0A2D4BV20_PYTIN (HMG box domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV20_PYTIN)

HSP 1 Score: 99.8 bits (247), Expect = 1.770e-20
Identity = 59/181 (32.60%), Postives = 101/181 (55.80%), Query Frame = 0
Query:  191 IARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERMKSELAAAGLTKLPARKSSSEAVEGGPTSLVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLRDEFREERSSVKKKQHKP 371
            + + RSA+ +F  + R ++   +PGL VG +QK+++  WK L  EE   Y  LAA+DKER + E     +   PA   +   VE    + + PL RV++ ++ DP V  +S+E L+ ++KA+E+F   LA  +++      ++ V+  DVA  +   P + WLRD+F + + S   ++ KP
Sbjct:    4 VKKPRSAYFIFSGEKRKEITDANPGLRVGDVQKLITARWKELTPEEKXVYLDLAAKDKERYERERLENPVXDAPADVVAPVEVEH---ACLYPLGRVKRXIQSDPDVNKVSREALVAISKASELFAQYLATKSYEQTLFNNKRQVKASDVARAIHTTPVLDWLRDDFPDMKQSAATQKTKP 181          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: A0A8K1FA27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA27_PYTOL)

HSP 1 Score: 98.6 bits (244), Expect = 3.280e-20
Identity = 57/164 (34.76%), Postives = 93/164 (56.71%), Query Frame = 0
Query:  196 SAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERMKSELAAAGLTKLPARKSSSEAVEGGPTS--LVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLRDEF 357
            SA+ LF AD R  V  E+PGL +G +QK+++  WK L  EE   Y  LA +DKER + E       +LP   ++ + VE  PT    + PL RV++ ++ DP V  +S+E L+ ++KA+E+F   LA  +++      ++ ++  DVA  +     + WLR++F
Sbjct:    9 SAYFLFAADKRKTVAQENPGLRIGEIQKLITAQWKELSAEEKEHYTTLAVQDKERYEREKLE-NPVELP-EANAQDGVEDEPTGNVCIYPLGRVKRIIQSDPDVNKVSREALIAISKASELFAQYLATKSYEQTLYNNKRQIKASDVARAIQTTSVLDWLREDF 170          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: G4YKY3_PHYSP (HMG box domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YKY3_PHYSP)

HSP 1 Score: 98.2 bits (243), Expect = 3.390e-20
Identity = 56/167 (33.53%), Postives = 93/167 (55.69%), Query Frame = 0
Query:  191 IARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERMKSELAAAGLTKLPARKSSSEAVEGGPTSLVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLRDEF 357
            + + +S+++LF  + R +V  E+PG  +G +QKI+S  WK L  EE   Y +LAA+DKER + EL      ++ A  ++         + + PL RVRK V+ DP VG ISK+ L+ + KA+E+F   L   +++      ++ V+  DV   +     + WLR++F
Sbjct:    4 VKKPQSSYLLFCNERRKQVMDENPGARIGDIQKIISAQWKELKPEEKEVYVQLAAKDKERYQQELL--DNPQIDAEPTAEGRAAHDSNACIYPLGRVRKIVQSDPDVGKISKDALIAIAKASELFAQFLGTKSYEQALYRNKRQVKASDVTRTIQTTASLDWLREDF 168          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: A0A7S2FZW8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZW8_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 5.240e-19
Identity = 56/168 (33.33%), Postives = 92/168 (54.76%), Query Frame = 0
Query:  190 KIARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERMKSELAAAGLTKLPARKSSSEAVEGGPTSLVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLRDEF 357
            K+ R + A+  F    R+ V    PGL+V    K L++ W+ L E E   +    A++ +  + E+       +   KSS    +     +V+P+ RVR+T +LDP V NI+KE   L+ KATE F+A +A+ ++KI   +GR++++  D+ D V   P+  WLRD+F
Sbjct:    4 KLKRNQEAFTSFCHSYRETV----PGLSVLDQSKALADRWRSLSEAEKDSFMPKVADENQGHQREIIDQSTLPVEPAKSSKGKKDSSAFEMVIPVGRVRRTCKLDPDVKNITKEATALVAKATERFLAQIAEESFKISSLSGRRTLKTDDIRDCVNRLPQYEWLRDDF 167          
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Match: D0P069_PHYIT (HMG box domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P069_PHYIT)

HSP 1 Score: 92.8 bits (229), Expect = 1.150e-18
Identity = 54/164 (32.93%), Postives = 89/164 (54.27%), Query Frame = 0
Query:  191 IARARSAWMLFLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKERMKSELAAAGLTKLPARKSSSEAVEGGPTSLVLPLARVRKTVRLDPSVGNISKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEMYWLR 354
            + + +S++++F  + R +V  E+PG  VG +QKI+S  WK L  EE   Y +LAA+DK R   EL      ++     + E    G  + + PL RVRK V+ DP VG +SK+ L+ +TKA+E+F   L   +++      ++ ++  DV   +     + WLR
Sbjct:    4 MKKPQSSYLIFCNERRKQVMDENPGARVGDIQKIISAQWKELKPEEKDVYVELAAKDKARYAQELL--DNPQVNEEPKAEEKTARGSHACIYPLGRVRKIVQSDPDVGKVSKDALVAITKASELFAQFLGTKSYEQALYRNKRQIKASDVTRTIQTTASLDWLR 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig103.346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIR0_ECTSI1.470e-12385.34HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5K256_9PHAE4.360e-2480.00HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1V9ZFH9_9STRA4.050e-2336.20HMG box domain-containing protein n=1 Tax=Achlya h... [more]
A0A1V9ZYX4_9STRA8.250e-2336.36HMG box domain-containing protein n=1 Tax=Thrausto... [more]
W4H0Q5_9STRA7.290e-2134.10HMG box domain-containing protein n=2 Tax=Aphanomy... [more]
A0A2D4BV20_PYTIN1.770e-2032.60HMG box domain-containing protein n=1 Tax=Pythium ... [more]
A0A8K1FA27_PYTOL3.280e-2034.76Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4YKY3_PHYSP3.390e-2033.53HMG box domain-containing protein n=4 Tax=Phytopht... [more]
A0A7S2FZW8_9STRA5.240e-1933.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D0P069_PHYIT1.150e-1832.93HMG box domain-containing protein n=2 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..173
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 183..381
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 190..260
e-value: 4.1E-15
score: 66.2
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 192..255
e-value: 3.1E-15
score: 56.3
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 191..259
score: 13.525
IPR009072Histone-foldGENE3D1.10.20.10coord: 277..344
e-value: 3.3E-15
score: 58.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 274..341
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 177..258
e-value: 7.5E-16
score: 60.2
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 182..255
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 282..340
e-value: 1.9E-10
score: 40.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig103contigP-lacustris_contig103:78862..89460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig103.346.1mRNA_P-lacustris_contig103.346.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig103 78815..89921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig103.346.1 ID=prot_P-lacustris_contig103.346.1|Name=mRNA_P-lacustris_contig103.346.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=403bp
MAGPPLVPSSSSNTIANVQKGDEMEDQPCPKRRRRSLDKMTPAADEPTLE
EAPQEQQLGEMEDVDADADADADSAAPEESGGGDTGAPGDTDPDAADRTT
DTQLVQEGTDAKGEEENEINHGPEQEQEEEEDDDQEQPEEEEEEGEEEEE
EEEEEEEEEEEEEEEEAQEGVGEEGIEASPAHREKPEGSKIARARSAWML
FLADNRDKVRAEHPGLAVGPMQKILSEMWKILGEEEVARYAKLAAEDKER
MKSELAAAGLTKLPARKSSSEAVEGGPTSLVLPLARVRKTVRLDPSVGNI
SKEGLMLLTKATEVFMASLADHAWKIGRQTGRKSVRPCDVADFVFAAPEM
YWLRDEFREERSSVKKKQHKPEAGGAKAAGVKKAGVAAPKRGRSITSFFQ
KA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR009072Histone-fold
IPR036910HMG_box_dom_sf
IPR003958CBFA_NFYB_domain