prot_P-lacustris_contig1020.289.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1020.289.1
Unique Nameprot_P-lacustris_contig1020.289.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length277
Homology
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BLAST of mRNA_P-lacustris_contig1020.289.1 vs. uniprot
Match: D8LS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS79_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 2.170e-47
Identity = 88/137 (64.23%), Postives = 105/137 (76.64%), Query Frame = 0 
Query:   20 KRARSSPLRITVLLLSHTAVTLRPRLASASTSLPSSSTSELCPDETAACYDSIFCWECVAQFEGSSDFCEERYPILTLDYGASAATADDDSCEAASALFCCSFDASGQDCLGDAVTLDYFQCGLLAGSGCALSILSC 156
            K+AR++PLR  + LL   A  LRP LASAST+LPSSS  ELCPDETAACY+S  CW+CVAQFE SS++CE+R+P+L  +        DDD CEAASAL+CCSFDASGQDCL D VT+DYF+CG+L GSGC LS   C
Sbjct:   15 KKARATPLRFALPLLLLVADALRPHLASASTTLPSSS--ELCPDETAACYESTLCWDCVAQFEDSSEYCEDRFPVLAAE--------DDDGCEAASALYCCSFDASGQDCLDDTVTVDYFRCGVLEGSGCDLSDSPC 141
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BLAST of mRNA_P-lacustris_contig1020.289.1 vs. uniprot
Match: A0A6H5L2W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W4_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.880e-44
Identity = 85/137 (62.04%), Postives = 102/137 (74.45%), Query Frame = 0 
Query:   20 KRARSSPLRITVLLLSHTAVTLRPRLASASTSLPSSSTSELCPDETAACYDSIFCWECVAQFEGSSDFCEERYPILTLDYGASAATADDDSCEAASALFCCSFDASGQDCLGDAVTLDYFQCGLLAGSGCALSILSC 156
            K  R++PLR  + LL   A TLRP LASASTSLPSSS  ELCPDETAACY+S  CW+CVAQFE SS++CE+RYP+L  +        DDD CEAA+AL+CCSFDASG+DCL D VT+DYF+C ++  SGC LS   C
Sbjct:   45 KNTRATPLRFALPLLLLVADTLRPHLASASTSLPSSS--ELCPDETAACYESTLCWDCVAQFEDSSEYCEDRYPVLAAE--------DDDGCEAATALYCCSFDASGEDCLDDTVTVDYFRCSVVEVSGCDLSDSPC 171
[Close]
BLAST of mRNA_P-lacustris_contig1020.289.1 vs. uniprot
Match: A0A6H5JEP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP0_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.530e-24
Identity = 68/127 (53.54%), Postives = 83/127 (65.35%), Query Frame = 0 
Query:   20 KRARSSPL--RITVLLLSHTAVTLRPRLASASTSLPSSSTSELCPDETAACYDSIFCWECVAQF-EGSSDFCEERYPILTLDYGASAATADDDSCEAASALFCCSFDASGQDCLGDAVTLDYFQCGL 143
            KR  ++PL  R+  + L   A T+   +   STSLPSSS SE C +E AACYDS  CW+CVAQF E   D C ERYP ++ + GAS        C+ ASALFCCSF  SGQDCL DAVT+++FQCGL
Sbjct:    6 KRRAAAPLKARVASIFLVINASTILLHVGHGSTSLPSSS-SEACVEEAAACYDSALCWDCVAQFAEDGVDSCGERYPAMS-NSGAS-------DCDVASALFCCSFYVSGQDCLDDAVTMEFFQCGL 123
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1020.289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS79_ECTSI2.170e-4764.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2W4_9PHAE1.880e-4462.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEP0_9PHAE1.530e-2453.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..270
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 271..276
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..248
NoneNo IPR availableTMHMMTMhelixcoord: 249..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1020contigP-lacustris_contig1020:38303..39133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1020.289.1mRNA_P-lacustris_contig1020.289.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1020 37647..39948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1020.289.1 ID=prot_P-lacustris_contig1020.289.1|Name=mRNA_P-lacustris_contig1020.289.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=277bp
MDTTTTGRAAAGASFFVGTKRARSSPLRITVLLLSHTAVTLRPRLASAST
SLPSSSTSELCPDETAACYDSIFCWECVAQFEGSSDFCEERYPILTLDYG
ASAATADDDSCEAASALFCCSFDASGQDCLGDAVTLDYFQCGLLAGSGCA
LSILSCSPTYSPDAGQATSAPGAAAVTGSPVTPSPTPPTLIDAAPTASPA
DEMAATTPSPDSIDDSSSGSDDDPRMSTPSPSGSDLDAGTGATSGTAGIF
AALPSYSSALFLWGAAFVVFMGRAGV*
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