prot_P-lacustris_contig1014.232.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1014.232.1
Unique Nameprot_P-lacustris_contig1014.232.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length111
Homology
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BLAST of mRNA_P-lacustris_contig1014.232.1 vs. uniprot
Match: D7G7Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z5_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 1.910e-41
Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 0 
Query:    1 MSLSKLSI-TGGGKAILHGSSRLGNTTTTAILPRQHVRLEQAQQQQAHLAVRVQRINAIIGELQPRTAALKDPQARKELELRLKGIARHGVFVSETWRELDQILAERGRA 109
            MSLS LS+ + GG+AIL GSS+L +      LPR  V+LEQAQQQQAHLA RVQRINA I EL PRTAA+KDP+AR+E+ELRLKG+ARHG+FV+ETWRELD ILAERGRA
Sbjct:    1 MSLSNLSVVSSGGRAILQGSSKLSSR-----LPRPQVQLEQAQQQQAHLAARVQRINATIEELYPRTAAVKDPEARREVELRLKGLARHGLFVTETWRELDAILAERGRA 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1014.232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7Z5_ECTSI1.910e-4171.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1014contigP-lacustris_contig1014:58724..62300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1014.232.1mRNA_P-lacustris_contig1014.232.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1014 58724..66497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1014.232.1 ID=prot_P-lacustris_contig1014.232.1|Name=mRNA_P-lacustris_contig1014.232.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=111bp
MSLSKLSITGGGKAILHGSSRLGNTTTTAILPRQHVRLEQAQQQQAHLAV
RVQRINAIIGELQPRTAALKDPQARKELELRLKGIARHGVFVSETWRELD
QILAERGRAQ*
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