prot_P-lacustris_contig1012.215.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1012.215.1
Unique Nameprot_P-lacustris_contig1012.215.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length281
Homology
BLAST of mRNA_P-lacustris_contig1012.215.1 vs. uniprot
Match: D7G861_ECTSI (ADP-ribosylation factor GTPase-activating protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G861_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 8.910e-153
Identity = 239/284 (84.15%), Postives = 256/284 (90.14%), Query Frame = 0
Query:    1 MGLTLTKEMSGGCSVTKVVPGGVAESRGVALGQRVCAVNGQPGGTYEQTMAVIGGSPRPISITFVMPASGVRS----RFSGVGGGPPVVQQSWADIGLAATIGAMDAANAVAVEWGLGASTPGVLDGVQSSGGGSVRPQPQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVEVSPEMATMTTKKALSETPGEEVGEFDVRFEEGELGMRLEERGSYKASSVVIKVTDDAGQAMSLGVRVGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRLRAPQAGGGR 280
            MGLTLTKEMSGGCSVTKVVPGGVA+SRGVALGQRVCAVNGQP GTYE TMAVIGGSPRPISITFVMP++G  S    RFSGVGGGPPVVQ +WAD+GLAATIGAMDAANAVAVEWGLGA+TPGVL G  SSG G + P PQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAV+VSP+MATM+TKKALS+ PGEEVGEFDVRF EGELGMRLEERGS+KASSVV+K+T+  GQA+SLGVR GC VVGINGEKYLSHAHTVATLKHA+RPV VR R P A G R
Sbjct:  784 MGLTLTKEMSGGCSVTKVVPGGVADSRGVALGQRVCAVNGQPSGTYEHTMAVIGGSPRPISITFVMPSTGGGSGNGGRFSGVGGGPPVVQHTWADVGLAATIGAMDAANAVAVEWGLGANTPGVLAGAHSSGAGDIPPAPQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVDVSPDMATMSTKKALSDAPGEEVGEFDVRFGEGELGMRLEERGSFKASSVVVKITE-GGQAVSLGVREGCKVVGINGEKYLSHAHTVATLKHARRPVVVRFRLPDASGRR 1066          
BLAST of mRNA_P-lacustris_contig1012.215.1 vs. uniprot
Match: W7TXK3_9STRA (Adp-ribosylation factor gtpase-activating (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXK3_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.090e-29
Identity = 105/286 (36.71%), Postives = 142/286 (49.65%), Query Frame = 0
Query:    1 MGLTLTKEMSGGCSVTKVVPGGVAESRGVALGQRVCAVNGQPGGTYEQTMAVIGGSPRPISITFVMPASGVRSRFSGVGGGPPVVQQSWADIGLAATIGAMDAANAVAVEW-GLGASTPGVLDGVQSSGGGSVRPQPQGFRVHQKHSLM-----AIPTGVAGGFGNSLAKHRTFAVEVSPEMATMTTKKALSETPGEEVGEFDVRFEEGELGMRLEE------RGSYKASSVVIKVTDDAGQAMSLGVRVGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRLRAP 274
            MGLTL+K   G   VT V P G A   GV +G  + +++ Q    Y+  MA +   PRP+ + F       R R  G+G                +T GA+    A    W G GAS  G   G ++  GG  +      +V  +H+ +     A+P+ +A    +S     ++ +      + +TTK  L+E P  + GEFD  F EG LGMRLEE       G  K    V++VT   G A S GVR GC VVG+NGE+++SHAHTVATLKH KRPV VR R P
Sbjct:  184 MGLTLSKVEGGRALVTSVAPAGQAVLGGVRVGDALVSLDHQAMALYDLVMARLPSLPRPLVVGF-------RRRMEGMG----------------STEGAVGGPRAPGPRWLGSGASLSG--SGGKAFAGGFGK----SLQVLTRHASLGPGAAAVPS-LASASSSSFTSGGSYPLGGG---SGLTTKVPLTEDP--DAGEFDACFAEGPLGMRLEEMPLTSREGGLKYVCQVLQVTS-GGAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLP 433          
BLAST of mRNA_P-lacustris_contig1012.215.1 vs. uniprot
Match: A0A4D9D4X6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4X6_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.040e-28
Identity = 101/280 (36.07%), Postives = 127/280 (45.36%), Query Frame = 0
Query:    1 MGLTLTKEMSGGCSVTKVVPGGVAESRGVALGQRVCAVNGQPGGTYEQTMAVIGGSPRPISITFVMPASGVRSRFSGVGGGPPVVQQSWADIGLAATIGAMDAANAVAVEWGLGASTPGVLDGVQSSGGGSVRPQPQGFRVHQKHSLMAIPTGVAGGFGNSLAKHRTFAVEVSPEMATMTTKKALSETPGEEVGEFDVRFEEGELGMRLEE------RGSYKASSVVIKVTDDAGQAMSLGVRVGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRLRAP 274
            MGLTL+K   G   VT V P G A   GV +G  + +++ Q    Y+  MA +   PRP+ + F     G+ S    VGG P      W   G +++      +   A   G G S   +        G +  P                P G  GG G                   +TTK  L++ PG   GEFD  F EG LGMRLEE       G  K    V++VT   G A S GVR GC VVG+NGE+++SHAHTVATLKH KRPV VR R P
Sbjct:  760 MGLTLSKVEGGRALVTSVAPAGQAVLGGVRVGDALVSLDHQAMALYDLVMARLPSLPRPLVVGFRRRMEGMGSTERAVGG-PRAPGPRWLGSGASSS-----GSGGKAFAGGFGKSLQVLTRHASLGPGTAAAPSLXXXXXXXXXXXXXXPLG--GGSG-------------------LTTKVPLTQDPG--TGEFDAWFAEGPLGMRLEEMPLTSREGGLKYVCQVLQVTS-GGAAESKGVRDGCCVVGVNGERFISHAHTVATLKHGKRPVLVRFRLP 1009          
BLAST of mRNA_P-lacustris_contig1012.215.1 vs. uniprot
Match: A0A7S2XZL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL0_9STRA)

HSP 1 Score: 108 bits (271), Expect = 9.110e-26
Identity = 72/148 (48.65%), Postives = 86/148 (58.11%), Query Frame = 0
Query:  141 VHQKHSLMAIPTGVAGGFGNSLAKHRTFAVEVSPE--------------MATMTTKKALSETPGEEVGEFDVRFEEGELGMRLEER--GSYKASSVVIKVTDDAGQAMSLGVRVGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRLR 272
            V      MA P  VAGGFG +L    +   E +P+              M  MTTKK L    G E GE DV F  G LG+RLEER  G     SVV  VT+ AGQA   GV VG T++G+NGE++LSHAHTV+TLKH KRP++VRLR
Sbjct:   15 VKAARERMAAPPAVAGGFGKTLNVD-SGDNEANPDSMENAEGSSGGAASMTGMTTKKELGS--GLEDGEVDVTFGPGPLGLRLEERPGGGGAMISVVTSVTE-AGQADKQGVEVGSTIIGLNGEQFLSHAHTVSTLKHGKRPISVRLR 158          
BLAST of mRNA_P-lacustris_contig1012.215.1 vs. uniprot
Match: A0A8J2SXS4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXS4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.150e-20
Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 0
Query:  180 TTKKALSETPGEEVGEFDVRFEEGELGMRLEERGSYKASSVVIKVTDDAGQAMSLGVRVGCTVVGINGEKYLSHAHTVATLKHAKRPVAVRLR 272
            TTK  L     ++  E+DV FE G LG RLEERG   A S+V  V D AGQA + GVR G  V+G+NGE+YLSHAHT ATLKH +RPV +RLR
Sbjct:  453 TTKVGLPSP--DDANEYDVTFESGPLGFRLEERGGLVAVSLVTSV-DAAGQAAAAGVRAGDVVLGVNGERYLSHAHTAATLKHGRRPVELRLR 542          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1012.215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G861_ECTSI8.910e-15384.15ADP-ribosylation factor GTPase-activating protein,... [more]
W7TXK3_9STRA1.090e-2936.71Adp-ribosylation factor gtpase-activating (Fragmen... [more]
A0A4D9D4X6_9STRA2.040e-2836.07Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2XZL0_9STRA9.110e-2648.65Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8J2SXS4_9STRA4.150e-2058.06Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 1..68
e-value: 0.13
score: 21.0
coord: 203..275
e-value: 1.4
score: 11.2
IPR001478PDZ domainPROSITEPS50106PDZcoord: 199..275
score: 9.19
IPR001478PDZ domainPROSITEPS50106PDZcoord: 1..68
score: 11.441
NoneNo IPR availableGENE3D2.30.42.10coord: 1..67
e-value: 1.2E-6
score: 30.3
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 200..272
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1012contigP-lacustris_contig1012:15172..18937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1012.215.1mRNA_P-lacustris_contig1012.215.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1012 14827..18937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1012.215.1 ID=prot_P-lacustris_contig1012.215.1|Name=mRNA_P-lacustris_contig1012.215.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=281bp
MGLTLTKEMSGGCSVTKVVPGGVAESRGVALGQRVCAVNGQPGGTYEQTM
AVIGGSPRPISITFVMPASGVRSRFSGVGGGPPVVQQSWADIGLAATIGA
MDAANAVAVEWGLGASTPGVLDGVQSSGGGSVRPQPQGFRVHQKHSLMAI
PTGVAGGFGNSLAKHRTFAVEVSPEMATMTTKKALSETPGEEVGEFDVRF
EEGELGMRLEERGSYKASSVVIKVTDDAGQAMSLGVRVGCTVVGINGEKY
LSHAHTVATLKHAKRPVAVRLRAPQAGGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf